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PDB: 472 results

8K4U
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BU of 8k4u by Molmil
Structure of BtKY72 spike receptor-binding domain (RBD) complexed with bat ACE2
Descriptor: ACE2, BtKY72, ZINC ION
Authors:Su, C, Qi, J.X, Gao, G.F.
Deposit date:2023-07-20
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural characteristics of BtKY72 RBD bound to bat ACE2 reveal multiple key residues affecting ACE2 usage of sarbecoviruses
To Be Published
1VGK
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BU of 1vgk by Molmil
The crystal structure of class I Major histocompatibility complex, H-2Kd at 2.0 A resolution
Descriptor: Beta-2-microglobulin, H-2 class I histocompatibility antigen, K-D alpha chain, ...
Authors:Zhou, M, Xu, Y, Liu, Y, Gao, G.F, Tien, P, Rao, Z.
Deposit date:2004-04-27
Release date:2005-06-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:The crystal structure of class I major histocompatibility complex, H-2Kd at 2.0 A resolution
To be Published
2ZQK
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BU of 2zqk by Molmil
Crystal structure of intimin-Tir68 complex
Descriptor: Intimin, Putative translocated intimin receptor protein (Translocated intimin receptor Tir)
Authors:Ma, Y, Gao, F, Li, D.-F, Gao, G.F.
Deposit date:2008-08-12
Release date:2009-08-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural insight into the interaction between intimin and Tir of enterohaemorrhagic E coli: evidence for a dynamic sequential clustering-aggregating-reticulating model
To be Published
2ZWK
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BU of 2zwk by Molmil
Crystal structure of intimin-Tir90 complex
Descriptor: Intimin, Putative translocated intimin receptor protein (Translocated intimin receptor Tir)
Authors:Ma, Y, Gao, F, Li, D.-F, Gao, G.F.
Deposit date:2008-12-16
Release date:2009-12-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural insight into the interaction between intimin and Tir of enterohaemorrhagic E coli: evidence for a dynamic sequential clustering-aggregating-reticulating model
To be Published
5GRJ
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BU of 5grj by Molmil
Crystal structure of human PD-L1 with monoclonal antibody avelumab
Descriptor: Programmed cell death 1 ligand 1, avelumab H chain, avelumab L chain
Authors:Liu, K, Tan, S, Chai, Y, Chen, D, Song, H, Zhang, C.W.-H, Shi, Y, Liu, J, Tan, W, Lyu, J, Gao, S, Yan, J, Qi, J, Gao, G.F.
Deposit date:2016-08-11
Release date:2016-11-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.206 Å)
Cite:Structural basis of anti-PD-L1 monoclonal antibody avelumab for tumor therapy.
Cell Res., 27, 2017
3DBN
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BU of 3dbn by Molmil
Crystal structure of the Streptoccocus suis serotype2 D-mannonate dehydratase in complex with its substrate
Descriptor: D-MANNONIC ACID, MANGANESE (II) ION, Mannonate dehydratase
Authors:Peng, H, Zhang, Q, Gao, F, Gao, G.F.
Deposit date:2008-06-02
Release date:2009-06-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structures of Streptococcus suis mannonate dehydratase (ManD) and its complex with substrate: genetic and biochemical evidence for a catalytic mechanism
J.Bacteriol., 191, 2009
3FAN
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BU of 3fan by Molmil
Crystal structure of chymotrypsin-like protease/proteinase (3CLSP/Nsp4) of porcine reproductive and respiratory syndrome virus (PRRSV)
Descriptor: Non-structural protein, PHOSPHATE ION
Authors:Gao, F, Peng, H, Tian, X, Lu, G, Liu, Y, Gao, G.F.
Deposit date:2008-11-17
Release date:2009-09-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and cleavage specificity of the chymotrypsin-like serine protease (3CLSP/nsp4) of Porcine Reproductive and Respiratory Syndrome Virus (PRRSV).
J.Mol.Biol., 392, 2009
3FAO
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BU of 3fao by Molmil
Crystal structure of S118A mutant 3CLSP of PRRSV
Descriptor: Non-structural protein, PHOSPHATE ION
Authors:Gao, F, Peng, H, Tian, X, Lu, G, Liu, Y, Gao, G.F.
Deposit date:2008-11-17
Release date:2009-10-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structure and cleavage specificity of the chymotrypsin-like serine protease (3CLSP/nsp4) of Porcine Reproductive and Respiratory Syndrome Virus (PRRSV).
J.Mol.Biol., 392, 2009
3FN3
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BU of 3fn3 by Molmil
Dimeric Structure of PD-L1
Descriptor: Programmed cell death 1 ligand 1
Authors:Chen, Y, Gao, F, Liu, P, Chu, F, Qi, J, Gao, G.F.
Deposit date:2008-12-23
Release date:2009-12-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A dimeric structure of PD-L1: functional units or evolutionary relics?
Protein Cell, 1, 2010
3GBL
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BU of 3gbl by Molmil
Crystal structure of grass carp Beta2-microglobulin
Descriptor: Beta2-microglobulin
Authors:Chen, W, Gao, F, Xia, C, Gao, G.F.
Deposit date:2009-02-20
Release date:2010-03-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of grass carp Beta2-microglobulin
To be Published
7YA0
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BU of 7ya0 by Molmil
Cryo-EM structure of hACE2-bound SARS-CoV-2 Omicron spike protein with L371S, P373S and F375S mutations (S-6P-RRAR)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, ...
Authors:Zhao, Z.N, Xie, Y.F, Qi, J.X, Gao, G.F.
Deposit date:2022-06-26
Release date:2022-09-21
Last modified:2023-08-02
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Omicron SARS-CoV-2 mutations stabilize spike up-RBD conformation and lead to a non-RBM-binding monoclonal antibody escape.
Nat Commun, 13, 2022
3AL4
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BU of 3al4 by Molmil
Crystal structure of the swine-origin A (H1N1)-2009 influenza A virus hemagglutinin (HA) reveals similar antigenicity to that of the 1918 pandemic virus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, ...
Authors:Zhang, W, Qi, J.X, Shi, Y, Li, Q, Yan, J.H, Gao, G.F.
Deposit date:2010-07-22
Release date:2010-08-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.872 Å)
Cite:Crystal structure of the swine-origin A (H1N1)-2009 influenza A virus hemagglutinin (HA) reveals similar antigenicity to that of the 1918 pandemic virus
Protein Cell, 1, 2010
5H3W
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BU of 5h3w by Molmil
The structure of the C-terminal of the fibronectin/fibrinogen-binding protein from Streptococcus suis (FBPS)
Descriptor: Fibronectin/fibrinogen binding protein
Authors:Musyoki, A.M, Qi, J, Gao, G.F.
Deposit date:2016-10-27
Release date:2016-11-16
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and functional analysis of an anchorless fibronectin-binding protein FBPS from Gram-positive bacterium Streptococcus suis
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
4E0R
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BU of 4e0r by Molmil
Structure of the chicken MHC class I molecule BF2*0401
Descriptor: 8-MERIC PEPTIDE (FUS/TLS), Beta-2 microglobulin, MHC class I alpha chain 2
Authors:Zhang, J, Chen, Y, Qi, J, Gao, F, Kaufman, J, Xia, C, Gao, G.F.
Deposit date:2012-03-05
Release date:2012-11-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Narrow Groove and Restricted Anchors of MHC Class I Molecule BF2*0401 Plus Peptide Transporter Restriction Can Explain Disease Susceptibility of B4 Chickens.
J.Immunol., 189, 2012
2OTP
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BU of 2otp by Molmil
Crystal Structure of Immunoglobulin-Like Transcript 1 (ILT1/LIR7/LILRA2)
Descriptor: Leukocyte immunoglobulin-like receptor subfamily A member 2
Authors:Gao, F, Peng, H, Chen, Y, Liu, Y, Gao, G.F.
Deposit date:2007-02-08
Release date:2008-02-19
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of 3D Domain Swapped Dimer of Immunoglobulin-Like Transcript 1 (ILT1/LIR7/LILRA2), Molecular Insight into Group 1 Activating Receptor Forming Unique MW Interaction Pattern
To be Published
4DFI
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BU of 4dfi by Molmil
Crystal structure of cell adhesion molecule nectin-2/CD112 mutant FAMP
Descriptor: Poliovirus receptor-related protein 2
Authors:Liu, J, Qian, X, Chen, Z, Xu, X, Gao, F, Zhang, S, Zhang, R, Qi, J, Gao, G.F, Yan, J.
Deposit date:2012-01-23
Release date:2012-06-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Cell Adhesion Molecule Nectin-2/CD112 and Its Binding to Immune Receptor DNAM-1/CD226
J.Immunol., 188, 2012
4DFH
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BU of 4dfh by Molmil
Crystal structure of cell adhesion molecule nectin-2/CD112 variable domain
Descriptor: Poliovirus receptor-related protein 2
Authors:Liu, J, Qian, X, Chen, Z, Xu, X, Gao, F, Zhang, S, Zhang, R, Qi, J, Gao, G.F, Yan, J.
Deposit date:2012-01-23
Release date:2012-06-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structure of Cell Adhesion Molecule Nectin-2/CD112 and Its Binding to Immune Receptor DNAM-1/CD226
J.Immunol., 188, 2012
2P5P
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BU of 2p5p by Molmil
Crystal Structure Analysis of the West Nile virus envelope (E) protein domain III
Descriptor: Genome polyprotein
Authors:Gao, F, Yuan, F, Gao, G.F.
Deposit date:2007-03-16
Release date:2008-03-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure Analysis of the West Nile virus envelope (E) protein domain III
To be Published
2Q3A
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BU of 2q3a by Molmil
Crystal Structure of Rhesus Macaque CD8 Alpha-Alpha Homodimer
Descriptor: CD8
Authors:Peng, H, Chen, Y, Zong, L, Gao, F, Liu, Y, Gao, G.F.
Deposit date:2007-05-30
Release date:2008-06-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of Rhesus Macaque CD8 Homodimer Sheds the Lights on the Molecular Basis of Rhesus Macaque MHC class I with CD8 Complex
To be Published
4F23
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BU of 4f23 by Molmil
Influenza A virus hemagglutinin H16 HA0 structure with an alpha-helix conformation in the cleavage site: a potential drug target
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin
Authors:Lu, X, Shi, Y, Gao, F, Xiao, H, Qi, J, Gao, G.F.
Deposit date:2012-05-07
Release date:2012-11-21
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Insights into Avian Influenza Virus Pathogenicity: the Hemagglutinin Precursor HA0 of Subtype H16 Has an Alpha-Helix Structure in Its Cleavage Site with Inefficient HA1/HA2 Cleavage.
J.Virol., 86, 2012
1ZVS
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BU of 1zvs by Molmil
Crystal structure of the first class MHC mamu and Tat-Tl8 complex
Descriptor: Beta-2-microglobulin, MHC class I antigen, Tat-Tl8
Authors:Lou, Z, Chu, F, Gao, G.F, Rao, Z.
Deposit date:2005-06-02
Release date:2006-06-13
Last modified:2019-11-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:First glimpse of the peptide presentation by rhesus macaque MHC class I: crystal structures of Mamu-A*01 complexed with two immunogenic SIV epitopes and insights into CTL escape.
J Immunol., 178, 2007
7YJ3
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BU of 7yj3 by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron BA.2 RBD in complex with human ACE2 (local refinement)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, Spike protein S1, ...
Authors:Zhao, Z.N, Xie, Y.F, Qi, J.X, Gao, G.F.
Deposit date:2022-07-19
Release date:2023-07-19
Last modified:2023-08-02
Method:ELECTRON MICROSCOPY (3.14 Å)
Cite:Structural basis for receptor binding and broader interspecies receptor recognition of currently circulating Omicron sub-variants.
Nat Commun, 14, 2023
7YHW
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BU of 7yhw by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron BA.2.12.1 RBD in complex with human ACE2 (local refinement)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhao, Z.N, Xie, Y.F, Qi, J.X, Gao, G.F.
Deposit date:2022-07-14
Release date:2023-07-19
Last modified:2023-08-02
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Structural basis for receptor binding and broader interspecies receptor recognition of currently circulating Omicron sub-variants.
Nat Commun, 14, 2023
7XQT
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BU of 7xqt by Molmil
The structure of FLA-K*00701/KP-FECV-11
Descriptor: Beta-2-microglobulin, MHC class I antigen alpha chain, peptide from Spike glycoprotein
Authors:Qiao, P.W, Yue, C, Peng, W.Y, Liu, K.F, Huo, S.T, Zhang, D, Chai, Y, Qi, J.X, Sun, Z.Y, Gao, G.F, Liu, W.J, Wu, G.Z.
Deposit date:2022-05-08
Release date:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Analysis of the characteristics of feline major histocompatibility complex class I molecules cross-presenting coronavirus peptides
To Be Published
7XQS
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The structure of FLA-K*00701/KP-CoV-9
Descriptor: Beta-2-microglobulin, MHC class I antigen alpha chain, peptide from Spike glycoprotein
Authors:Qiao, P.W, Yue, C, Peng, W.Y, Liu, K.F, Huo, S.T, Zhang, D, Chai, Y, Qi, J.X, Sun, Z.Y, Gao, G.F, Liu, W.J, Wu, G.Z.
Deposit date:2022-05-08
Release date:2023-11-08
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Analysis of the characteristics of feline major histocompatibility complex class I molecules cross-presenting coronavirus peptides
To Be Published

224004

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