3DBN

Crystal structure of the Streptoccocus suis serotype2 D-mannonate dehydratase in complex with its substrate

Summary for 3DBN

DescriptorMannonate dehydratase, MANGANESE (II) ION, D-MANNONIC ACID (3 entities in total)
Functional Keywordstim barrel, lyase
Biological sourceStreptococcus suis
Total number of polymer chains2
Total molecular weight86355.15
Authors
Peng, H.,Zhang, Q.,Gao, F.,Gao, G.F. (deposition date: 2008-06-02, release date: 2009-06-23, Last modification date: 2011-07-13)
Primary citation
Zhang, Q.,Gao, F.,Peng, H.,Cheng, H.,Liu, Y.,Tang, J.,Thompson, J.,Wei, G.,Zhang, J.,Du, Y.,Yan, J.,Gao, G.F.
Crystal structures of Streptococcus suis mannonate dehydratase (ManD) and its complex with substrate: genetic and biochemical evidence for a catalytic mechanism
J.Bacteriol., 191:5832-5837, 2009
PubMed: 19617363 (PDB entries with the same primary citation)
DOI: 10.1128/JB.00599-09
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.9 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.281203.3%9.0%2.0%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 3dbn
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Molmil generated image of 3dbn
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Molmil generated image of 3dbn
rotated about y axis by 90°