2P5P

Crystal Structure Analysis of the West Nile virus envelope (E) protein domain III

Summary for 2P5P

DescriptorGenome polyprotein (2 entities in total)
Functional Keywordswest nile virus, envelope protein, viral protein
Biological sourceWest Nile virus
Cellular locationCapsid protein C: Virion (Potential). Small envelope protein M: Virion membrane; Multi-pass membrane protein (By similarity). Envelope protein E: Virion membrane; Multi- pass membrane protein (By similarity). Non-structural protein 1: Secreted. Non-structural protein 2A: Host endoplasmic reticulum membrane; Multi-pass membrane protein (Potential). Serine protease subunit NS2B: Host endoplasmic reticulum membrane; Multi-pass membrane protein (Potential). Serine protease NS3: Host endoplasmic reticulum membrane; Peripheral membrane protein; Cytoplasmic side (By similarity). Non-structural protein 4A: Host endoplasmic reticulum membrane; Multi-pass membrane protein (By similarity). Non-structural protein 4B: Host endoplasmic reticulum membrane; Multi-pass membrane protein (By similarity). RNA-directed RNA polymerase NS5: Host endoplasmic reticulum membrane; Peripheral membrane protein; Cytoplasmic side (By similarity) P06935
Total number of polymer chains3
Total molecular weight36728.55
Authors
Gao, F.,Yuan, F.,Gao, G.F. (deposition date: 2007-03-16, release date: 2008-03-18, Last modification date: 2011-07-13)
Primary citation
Liu, J.,Gao, F.,Yuan, F.,Gao, G.F.
Crystal Structure Analysis of the West Nile virus envelope (E) protein domain III
To be Published,
Experimental method
X-RAY DIFFRACTION (2.8 Å)
NMR Information
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Structure validation

ClashscoreRamachandran outliersSidechain outliersRSRZ outliers433.4%5.1%2.6%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 2p5p
no rotation
Molmil generated image of 2p5p
rotated about x axis by 90°
Molmil generated image of 2p5p
rotated about y axis by 90°