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PDB: 124 results

5EQG
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Human GLUT1 in complex with inhibitor (2~{S})-3-(4-fluorophenyl)-2-[2-(3-hydroxyphenyl)ethanoylamino]-~{N}-[(1~{S})-1-phenylethyl]propanamide
Descriptor: (2~{S})-3-(4-fluorophenyl)-2-[2-(3-hydroxyphenyl)ethanoylamino]-~{N}-[(1~{S})-1-phenylethyl]propanamide, Solute carrier family 2, facilitated glucose transporter member 1
Authors:Kapoor, K, Finer-Moore, J, Pedersen, B.P, Caboni, L, Waight, A.B, Hillig, R, Bringmann, P, Heisler, I, Muller, T, Siebeneicher, H, Stroud, R.M.
Deposit date:2015-11-12
Release date:2016-04-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Mechanism of inhibition of human glucose transporter GLUT1 is conserved between cytochalasin B and phenylalanine amides.
Proc.Natl.Acad.Sci.USA, 113, 2016
5EQI
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Human GLUT1 in complex with Cytochalasin B
Descriptor: Cytochalasin B, Solute carrier family 2, facilitated glucose transporter member 1
Authors:Kapoor, K, Finer-Moore, J, Pedersen, B.P, Caboni, L, Waight, A.B, Hillig, R, Bringmann, P, Heisler, I, Muller, T, Siebeneicher, H, Stroud, R.M.
Deposit date:2015-11-12
Release date:2016-04-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.002 Å)
Cite:Mechanism of inhibition of human glucose transporter GLUT1 is conserved between cytochalasin B and phenylalanine amides.
Proc.Natl.Acad.Sci.USA, 113, 2016
5EQH
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Human GLUT1 in complex with inhibitor (2~{S})-3-(2-bromophenyl)-2-[2-(4-methoxyphenyl)ethanoylamino]-~{N}-[(1~{S})-1-phenylethyl]propanamide
Descriptor: (2~{S})-3-(2-bromophenyl)-2-[2-(4-methoxyphenyl)ethanoylamino]-~{N}-[(1~{S})-1-phenylethyl]propanamide, Solute carrier family 2, facilitated glucose transporter member 1
Authors:Kapoor, K, Finer-Moore, J, Pedersen, B.P, Caboni, L, Waight, A.B, Hillig, R, Bringmann, P, Heisler, I, Muller, T, Siebeneicher, H, Stroud, R.M.
Deposit date:2015-11-12
Release date:2016-04-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Mechanism of inhibition of human glucose transporter GLUT1 is conserved between cytochalasin B and phenylalanine amides.
Proc.Natl.Acad.Sci.USA, 113, 2016
8SBE
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Structure of the rat vesicular glutamate transporter 2 determined by single-particle Cryo-EM
Descriptor: Vesicular glutamate transporter 2
Authors:Li, F, Finer-Moore, J, Eriksen, J, Cheng, Y, Edwards, R, Stroud, R.
Deposit date:2023-04-03
Release date:2023-05-03
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Ion transport and regulation in a synaptic vesicle glutamate transporter.
Science, 368, 2020
2BE1
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BU of 2be1 by Molmil
Structure of the compact lumenal domain of yeast Ire1
Descriptor: Serine/threonine-protein kinase/endoribonuclease IRE1, peptide
Authors:Credle, J.J, Finer-Moore, J.S, Papa, F.R, Stroud, R.M, Walter, P.
Deposit date:2005-10-21
Release date:2005-12-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.983 Å)
Cite:Inaugural Article: On the mechanism of sensing unfolded protein in the endoplasmic reticulum
Proc.Natl.Acad.Sci.Usa, 102, 2005
3DH3
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BU of 3dh3 by Molmil
Crystal Structure of RluF in complex with a 22 nucleotide RNA substrate
Descriptor: Ribosomal large subunit pseudouridine synthase F, stem loop fragment of E. Coli 23S RNA
Authors:Alian, A, DeGiovanni, A, Stroud, R.M, Finer-Moore, J.S.
Deposit date:2008-06-16
Release date:2009-04-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of an RluF-RNA complex: a base-pair rearrangement is the key to selectivity of RluF for U2604 of the ribosome.
J.Mol.Biol., 388, 2009
2BBQ
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STRUCTURAL BASIS FOR RECOGNITION OF POLYGLUTAMYL FOLATES BY THYMIDYLATE SYNTHASE
Descriptor: 10-PARPARGYL-5,8-DIDEAZAFOLATE-4-GLUTAMIC ACID, 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, THYMIDYLATE SYNTHASE
Authors:Kamb, A, Finer-Moore, J, Stroud, R.M.
Deposit date:1992-09-16
Release date:1994-01-31
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for recognition of polyglutamyl folates by thymidylate synthase.
Biochemistry, 31, 1992
4GGM
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BU of 4ggm by Molmil
Structure of LpxI
Descriptor: (R)-((2R,3S,4R,5R,6R)-3-HYDROXY-2-(HYDROXYMETHYL)-5-((R)-3-HYDROXYTETRADECANAMIDO)-6-(PHOSPHONOOXY)TETRAHYDRO-2H-PYRAN-4-YL) 3-HYDROXYTETRADECANOATE, MAGNESIUM ION, UDP-2,3-diacylglucosamine pyrophosphatase LpxI
Authors:Metzger IV, L.E, Lee, J.K, Finer-Moore, J.S, Raetz, C.R.H, Stroud, R.M, Center for Structures of Membrane Proteins (CSMP)
Deposit date:2012-08-06
Release date:2012-10-03
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.897 Å)
Cite:LpxI structures reveal how a lipid A precursor is synthesized.
Nat.Struct.Mol.Biol., 19, 2012
4ZYR
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Crystal structure of E. coli Lactose permease G46W/G262W bound to p-nitrophenyl alpha-D-galactopyranoside (alpha-NPG)
Descriptor: 4-nitrophenyl alpha-D-galactopyranoside, Lactose permease, nonyl beta-D-glucopyranoside
Authors:Kumar, H, Finer-Moore, J.S, Kaback, H.R, Stroud, R.M.
Deposit date:2015-05-22
Release date:2015-07-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.312 Å)
Cite:Structure of LacY with an alpha-substituted galactoside: Connecting the binding site to the protonation site.
Proc.Natl.Acad.Sci.USA, 112, 2015
1DNA
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BU of 1dna by Molmil
D221(169)N MUTANT DOES NOT PROMOTE OPENING OF THE COFACTOR IMIDAZOLIDINE RING
Descriptor: 10-PROPARGYL-5,8-DIDEAZAFOLIC ACID, 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, THYMIDYLATE SYNTHASE
Authors:Sage, C.R, Michelitsch, M.D, Finer-Moore, J, Stroud, R.M.
Deposit date:1998-06-25
Release date:1998-11-04
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:D221 in thymidylate synthase controls conformation change, and thereby opening of the imidazolidine.
Biochemistry, 37, 1998
3NE2
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BU of 3ne2 by Molmil
Archaeoglobus fulgidus aquaporin
Descriptor: Probable aquaporin AqpM, octyl beta-D-glucopyranoside
Authors:Lee, J.K, Finer-Moore, J.S, Stroud, R.M, Center for Structures of Membrane Proteins (CSMP)
Deposit date:2010-06-08
Release date:2010-09-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Archaeoglobus fulgidus aquaporin
To be Published
3NK5
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BU of 3nk5 by Molmil
Crystal structure of AqpZ mutant F43W
Descriptor: Aquaporin Z, octyl beta-D-glucopyranoside
Authors:Savage, D.F, O'Connell, J.D, Stroud, R.M, Finer-Moore, J.S.
Deposit date:2010-06-18
Release date:2010-08-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural context shapes the aquaporin selectivity filter.
Proc.Natl.Acad.Sci.USA, 107, 2010
3SDM
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BU of 3sdm by Molmil
Structure of oligomeric kinase/RNase Ire1 in complex with an oligonucleotide
Descriptor: Serine/threonine-protein kinase/endoribonuclease IRE1
Authors:Korennykh, A, Korostelev, A, Egea, P, Finer-Moore, J, Zhang, C, Stroud, R, Shokat, K, Walter, P.
Deposit date:2011-06-09
Release date:2011-07-13
Method:X-RAY DIFFRACTION (6.6 Å)
Cite:Cofactor-mediated conformational control in the bifunctional kinase/RNase Ire1.
Bmc Biol., 9, 2011
4GEV
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BU of 4gev by Molmil
E. coli thymidylate synthase Y209W variant in complex with substrate and a cofactor analog
Descriptor: 10-PROPARGYL-5,8-DIDEAZAFOLIC ACID, 2'-deoxy-5'-uridylic acid, Thymidylate synthase
Authors:Newby, Z, Lee, T.T, Finer-Moore, J, Stroud, R.M.
Deposit date:2012-08-02
Release date:2012-08-29
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:A remote mutation affects the hydride transfer by disrupting concerted protein motions in thymidylate synthase.
J.Am.Chem.Soc., 134, 2012
2OML
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BU of 2oml by Molmil
crystal structure of E. coli pseudouridine synthase RluE
Descriptor: Ribosomal large subunit pseudouridine synthase E, SULFATE ION
Authors:Pan, H, Ho, J.D, Stroud, R.M, Finer-Moore, J.
Deposit date:2007-01-22
Release date:2007-03-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:The Crystal Structure of E. coli rRNA Pseudouridine Synthase RluE.
J.Mol.Biol., 367, 2007
2OLW
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BU of 2olw by Molmil
Crystal Structure of E. coli pseudouridine synthase RluE
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, ACETIC ACID, Ribosomal large subunit pseudouridine synthase E, ...
Authors:Pan, H, Ho, J.D, Stroud, R.M, Finer-Moore, J.
Deposit date:2007-01-19
Release date:2007-03-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Crystal Structure of E. coli rRNA Pseudouridine Synthase RluE.
J.Mol.Biol., 367, 2007
3FBV
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BU of 3fbv by Molmil
Crystal structure of the oligomer formed by the kinase-ribonuclease domain of Ire1
Descriptor: N~2~-1H-benzimidazol-5-yl-N~4~-(3-cyclopropyl-1H-pyrazol-5-yl)pyrimidine-2,4-diamine, Serine/threonine-protein kinase/endoribonuclease IRE1
Authors:Korennykh, A.V, Egea, P.F, Korostelev, A.A, Finer-Moore, J, Zhang, C, Shokat, K.M, Stroud, R.M, Walter, P.
Deposit date:2008-11-19
Release date:2008-12-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The unfolded protein response signals through high-order assembly of Ire1.
Nature, 457, 2009
1NCE
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BU of 1nce by Molmil
Crystal structure of a ternary complex of E. coli thymidylate synthase D169C with dUMP and the antifolate CB3717
Descriptor: 10-PROPARGYL-5,8-DIDEAZAFOLIC ACID, 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, Thymidylate synthase
Authors:Birdsall, D.L, Finer-Moore, J, Stroud, R.M.
Deposit date:2002-12-05
Release date:2002-12-25
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The only active mutant of thymidylate synthase D169, a residue far from the site of methyl transfer, demonstrates the exquisite nature of enzyme specificity.
Protein Eng., 16, 2003
4FGT
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BU of 4fgt by Molmil
Allosteric peptidic inhibitor of human thymidylate synthase that stabilizes inactive conformation of the enzyme.
Descriptor: CG peptide, SULFATE ION, Thymidylate synthase
Authors:Tochowicz, A, Finer-Moore, J, Stroud, R.M, Costi, M.P.
Deposit date:2012-06-04
Release date:2013-03-06
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Alanine mutants of the interface residues of human thymidylate synthase decode key features of the binding mode of allosteric anticancer peptides.
J.Med.Chem., 58, 2015
2G8X
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BU of 2g8x by Molmil
Escherichia coli Y209W apoprotein
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, CARBONATE ION, PHOSPHATE ION, ...
Authors:Lee, T.T, Finer-Moore, J.S, Stroud, R.M.
Deposit date:2006-03-03
Release date:2006-03-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:The role of protein dynamics in thymidylate synthase catalysis: Variants of conserved dUMP-binding Tyr-261
TO BE PUBLISHED
2IST
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BU of 2ist by Molmil
crystal structure of RluD from E. coli
Descriptor: BICARBONATE ION, CHLORIDE ION, Ribosomal large subunit pseudouridine synthase D
Authors:Foster, P.G, Finer-Moore, J.S, Stroud, R.M.
Deposit date:2006-10-18
Release date:2006-10-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Crystal structure of RluD from E. coli
TO BE PUBLISHED
1JTU
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BU of 1jtu by Molmil
E. coli Thymidylate Synthase in a Complex with dUMP and LY338913, A Polyglutamylated Pyrrolo(2,3-d)pyrimidine-based Antifolate
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 2-{4-[4-(4-{4-[2-(2-AMINO-4-OXO-4,7-DIHYDRO-3H-PYRROLO[2,3-D]PYRIMIDIN-5-YL)-ETHYL]-BENZOYLAMINO}-4-CARBOXY-BUTYRYLAMIN O)-4-CARBOXY-BUTYRYLAMINO}-PENTANEDIOIC ACID, THYMIDYLATE SYNTHASE
Authors:Sayre, P.H, Finer-Moore, J.S, Fritz, T.A, Biermann, D, Gates, S.B, MacKellar, W.C, Patel, V.F, Stroud, R.M.
Deposit date:2001-08-22
Release date:2001-09-19
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Multi-targeted antifolates aimed at avoiding drug resistance form covalent closed inhibitory complexes with human and Escherichia coli thymidylate synthases.
J.Mol.Biol., 313, 2001
4J6E
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BU of 4j6e by Molmil
Structure of LPXI D225A Mutant
Descriptor: (2R,3R,4R,5S,6R)-2-{[(S)-{[(S)-{[(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}-5-hydroxy-6-(hydroxymethyl)-3-{[(3R)-3-hydroxytetradecanoyl]amino}tetrahydro-2H-pyran-4-yl (3R)-3-hydroxytetradecanoate, UDP-2,3-diacylglucosamine pyrophosphatase LpxI
Authors:Metzger IV, L.E, Lee, J.K, Finer-Moore, J.S, Raetz, C.R.H, Stroud, R.M, Center for Structures of Membrane Proteins (CSMP)
Deposit date:2013-02-11
Release date:2013-05-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:LpxI structures reveal how a lipid A precursor is synthesized.
Nat.Struct.Mol.Biol., 19, 2012
4OAA
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BU of 4oaa by Molmil
Crystal structure of E. coli lactose permease G46W,G262W bound to sugar
Descriptor: Lactose/galactose transporter, beta-D-galactopyranose-(1-1)-1-thio-beta-D-galactopyranose
Authors:Kumar, H, Kasho, V, Smirnova, I, Finer-Moore, J, Kaback, H.R, Stroud, R.M.
Deposit date:2014-01-03
Release date:2014-01-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure of sugar-bound LacY.
Proc.Natl.Acad.Sci.USA, 111, 2014
4IQM
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Crystal structure of the catalytic domain of human Pus1
Descriptor: tRNA pseudouridine synthase A, mitochondrial
Authors:Czudnochowski, N, Finer-Moore, J.S, Stroud, R.M.
Deposit date:2013-01-11
Release date:2013-06-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:In Human Pseudouridine Synthase 1 (hPus1), a C-Terminal Helical Insert Blocks tRNA from Binding in the Same Orientation as in the Pus1 Bacterial Homologue TruA, Consistent with Their Different Target Selectivities.
J.Mol.Biol., 425, 2013

225946

数据于2024-10-09公开中

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