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PDB: 40736 results

4TIM
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BU of 4tim by Molmil
CRYSTALLOGRAPHIC AND MOLECULAR MODELING STUDIES ON TRYPANOSOMAL TRIOSEPHOSPHATE ISOMERASE: A CRITICAL ASSESSMENT OF THE PREDICTED AND OBSERVED STRUCTURES OF THE COMPLEX WITH 2-PHOSPHOGLYCERATE
Descriptor: 2-PHOSPHOGLYCERIC ACID, TRIOSEPHOSPHATE ISOMERASE
Authors:Nobel, M.E.M, Wierenga, R.K, Hol, W.G.J.
Deposit date:1991-04-11
Release date:1992-10-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystallographic and molecular modeling studies on trypanosomal triosephosphate isomerase: a critical assessment of the predicted and observed structures of the complex with 2-phosphoglycerate.
J.Med.Chem., 34, 1991
3T6L
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BU of 3t6l by Molmil
Y54F mutant of core streptavidin
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Streptavidin
Authors:Baugh, L, Le Trong, I, Stayton, P.S, Stenkamp, R.E, Lybrand, T.P.
Deposit date:2011-07-28
Release date:2011-12-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Second-Contact Shell Mutation Diminishes Streptavidin-Biotin Binding Affinity through Transmitted Effects on Equilibrium Dynamics.
Biochemistry, 51, 2012
3TFV
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BU of 3tfv by Molmil
Crystal structure of dehydrosqualene synthase (crtm) from s. aureus complexed with bph-1154
Descriptor: 5-bromo-2-{[3-(octyloxy)benzyl]sulfanyl}benzoic acid, Dehydrosqualene synthase, MAGNESIUM ION
Authors:Lin, F.-Y, Zhang, Y, Liu, Y.-L, Oldfield, E.
Deposit date:2011-08-16
Release date:2012-04-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Dual dehydrosqualene/squalene synthase inhibitors: leads for innate immune system-based therapeutics.
Chemmedchem, 7, 2012
3TFN
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BU of 3tfn by Molmil
Crystal structure of dehydrosqualene synthase (crtm) from s. aureus complexed with bph-1183
Descriptor: (1-{2-[4-(diphenylmethyl)piperazin-1-yl]-2-oxoethyl}cyclopentyl)acetic acid, Dehydrosqualene synthase, MAGNESIUM ION
Authors:Lin, F.-Y, Liu, Y.-L, Oldfield, E.
Deposit date:2011-08-16
Release date:2012-04-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Dual dehydrosqualene/squalene synthase inhibitors: leads for innate immune system-based therapeutics.
Chemmedchem, 7, 2012
4NI6
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BU of 4ni6 by Molmil
Repeat domain 1 of Clostridium perfringens CPE0147
Descriptor: Putative surface anchored protein
Authors:Kwon, H, Squire, C.J, Young, P.G, Baker, E.N.
Deposit date:2013-11-05
Release date:2013-12-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Autocatalytically generated Thr-Gln ester bond cross-links stabilize the repetitive Ig-domain shaft of a bacterial cell surface adhesin.
Proc.Natl.Acad.Sci.USA, 111, 2014
4NUZ
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BU of 4nuz by Molmil
Crystal structure of a glycosynthase mutant (D233Q) of EndoS, an endo-beta-N-acetyl-glucosaminidase from Streptococcus pyogenes
Descriptor: CALCIUM ION, Endo-beta-N-acetylglucosaminidase F2
Authors:Trastoy, B, Guenther, S, Snyder, G.A, Sundberg, E.J.
Deposit date:2013-12-04
Release date:2014-04-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.905 Å)
Cite:Crystal structure of Streptococcus pyogenes EndoS, an immunomodulatory endoglycosidase specific for human IgG antibodies.
Proc.Natl.Acad.Sci.USA, 111, 2014
4NDX
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BU of 4ndx by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS I92N at cryogenic temperature
Descriptor: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
Authors:Caro, J.A, Schlessman, J.L, Heroux, A, Garcia-Moreno E, B.
Deposit date:2013-10-28
Release date:2013-11-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.496 Å)
Cite:Polar cavities in proteins
To be Published
4U72
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BU of 4u72 by Molmil
Crystal structure of 4-phenylimidazole bound form of human indoleamine 2,3-dioxygenase (A260G mutant)
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 4-PHENYL-1H-IMIDAZOLE, Indoleamine 2,3-dioxygenase 1, ...
Authors:Sugimoto, H, Horitani, M, Kometani, E, Shiro, Y.
Deposit date:2014-07-30
Release date:2015-09-02
Last modified:2020-01-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Conformation and Mobility of Active Site Loop is Critical for Substrate Binding and Inhibition in Human Indoleamine 2,3-Dioxygenase
to be published
3THG
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BU of 3thg by Molmil
Crystal structure of the creosote Rubisco activase C-domain
Descriptor: GLYCEROL, Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic
Authors:Henderson, J.N, Kuriata, A.M, Fromme, R, Salvucci, M.E, Wachter, R.M.
Deposit date:2011-08-18
Release date:2011-08-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Atomic resolution x-ray structure of the substrate recognition domain of higher plant ribulose-bisphosphate carboxylase/oxygenase (Rubisco) activase.
J.Biol.Chem., 286, 2011
4NDB
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BU of 4ndb by Molmil
X-ray structure of a mutant (T61D) of calexcitin - a neuronal calcium-signalling protein
Descriptor: CALCIUM ION, Calexcitin
Authors:Erskine, P.T, Fokas, A, Muriithi, C, Razzall, E, Bowyer, A, Findlow, I.S, Werner, J.M, Wallace, B.A, Wood, S.P, Cooper, J.B.
Deposit date:2013-10-25
Release date:2014-10-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray, spectroscopic and normal-mode dynamics of calexcitin: structure-function studies of a neuronal calcium-signalling protein.
Acta Crystallogr.,Sect.D, 71, 2015
4NHP
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BU of 4nhp by Molmil
X-ray structure of the complex between the hen egg white lysozyme and pentachlorocarbonyliridate (III) (4 days)
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION, ...
Authors:Petruk, A.A, Bikiel, D.E, Vergara, A, Merlino, A.
Deposit date:2013-11-05
Release date:2014-09-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Interaction between proteins and Ir based CO releasing molecules: mechanism of adduct formation and CO release.
Inorg.Chem., 53, 2014
4NIM
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BU of 4nim by Molmil
Crystal Structure of a Short Chain Dehydrogenase from Brucella melitensis
Descriptor: 1,2-ETHANEDIOL, Versicolorin reductase
Authors:Dranow, D.M, Edwards, T.E, Lorimer, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2013-11-06
Release date:2013-11-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of a Short Chain Dehydrogenase from Brucella melitensis
TO BE PUBLISHED
3TKB
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BU of 3tkb by Molmil
crystal structure of human uracil-DNA glycosylase D183G/K302R mutant
Descriptor: IMIDAZOLE, Uracil-DNA glycosylase
Authors:Assefa, N.G, Niiranen, L, Willassen, N.P, Smalas, A.O, Moe, E.
Deposit date:2011-08-26
Release date:2011-10-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Thermal unfolding studies of cold adapted uracil-DNA N-glycosylase (UNG) from Atlantic cod (Gadus morhua). A comparative study with human UNG.
Comp.Biochem.Physiol. B: Biochem.Mol.Biol., 161, 2012
3TKZ
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BU of 3tkz by Molmil
Structure of the SHP-2 N-SH2 domain in a 1:2 complex with RVIpYFVPLNR peptide
Descriptor: PROTEIN (RVIpYFVPLNR peptide), Tyrosine-protein phosphatase non-receptor type 11
Authors:Zhang, Y, Zhang, J, Yuan, C, Hard, R.L, Park, I.H, Li, C, Bell, C.E, Pei, D.
Deposit date:2011-08-29
Release date:2011-10-26
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Simultaneous binding of two peptidyl ligands by a SRC homology 2 domain.
Biochemistry, 50, 2011
4NPS
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BU of 4nps by Molmil
Crystal Structure of Bep1 protein (VirB-translocated Bartonella effector protein) from Bartonella clarridgeiae
Descriptor: ACETATE ION, Bartonella effector protein (Bep) substrate of VirB T4SS
Authors:Dranow, D.M, Abendroth, J, Edwards, T.E, Lorimer, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2013-11-22
Release date:2014-10-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Evolutionary Diversification of Host-Targeted Bartonella Effectors Proteins Derived from a Conserved FicTA Toxin-Antitoxin Module.
Microorganisms, 9, 2021
3TRK
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BU of 3trk by Molmil
Structure of the Chikungunya virus nsP2 protease
Descriptor: Nonstructural polyprotein, SODIUM ION
Authors:Cheung, J, Franklin, M, Mancia, F, Rudolph, M, Cassidy, M, Gary, E, Burshteyn, F, Love, J.
Deposit date:2011-09-09
Release date:2011-09-28
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.397 Å)
Cite:Structure of the Chikungunya virus nsP2 protease
To be Published
4NUY
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BU of 4nuy by Molmil
Crystal structure of EndoS, an endo-beta-N-acetyl-glucosaminidase from Streptococcus pyogenes
Descriptor: CALCIUM ION, Endo-beta-N-acetylglucosaminidase F2
Authors:Trastoy, B, Guenther, S, Snyder, G.A, Sundberg, E.J.
Deposit date:2013-12-04
Release date:2014-04-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.609 Å)
Cite:Crystal structure of Streptococcus pyogenes EndoS, an immunomodulatory endoglycosidase specific for human IgG antibodies.
Proc.Natl.Acad.Sci.USA, 111, 2014
4U9P
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BU of 4u9p by Molmil
Structure of the methanofuran/methanopterin biosynthetic enzyme MJ1099 from Methanocaldococcus jannaschii
Descriptor: GLYCEROL, UPF0264 protein MJ1099
Authors:Bobik, T.A, Morales, E, Shin, A, Cascio, D, Sawaya, M.R, Arbing, M, Rasche, M.E.
Deposit date:2014-08-06
Release date:2014-11-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of the methanofuran/methanopterin-biosynthetic enzyme MJ1099 from Methanocaldococcus jannaschii.
Acta Crystallogr.,Sect.F, 70, 2014
3TOW
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BU of 3tow by Molmil
Crystal Structure of the MABP Domain of MVB12B of Human ESCRT-I Complex
Descriptor: Multivesicular body subunit 12B
Authors:Boura, E, Hurley, J.H.
Deposit date:2011-09-06
Release date:2012-01-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Structural basis for membrane targeting by the MVB12-associated beta-prism domain of the human ESCRT-I MVB12 subunit.
Proc.Natl.Acad.Sci.USA, 109, 2012
3TQI
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BU of 3tqi by Molmil
Structure of the GMP synthase (guaA) from Coxiella burnetii
Descriptor: GMP synthase [glutamine-hydrolyzing]
Authors:Franklin, M.C, Cheung, J, Rudolph, M, Cassidy, M, Gary, E, Burshteyn, F, Love, J.
Deposit date:2011-09-09
Release date:2011-09-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:Structural genomics for drug design against the pathogen Coxiella burnetii.
Proteins, 83, 2015
4UHS
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BU of 4uhs by Molmil
Crystal structure of the receiver domain of CpxR from E. coli (tetragonal form)
Descriptor: MAGNESIUM ION, TRANSCRIPTIONAL REGULATORY PROTEIN CPXR
Authors:Mechaly, A.E, Alzari, P.M.A.
Deposit date:2015-03-25
Release date:2016-04-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (5 Å)
Cite:Conformational plasticity of the response regulator CpxR, a key player in Gammaproteobacteria virulence and drug-resistance.
J. Struct. Biol., 204, 2018
4UHK
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BU of 4uhk by Molmil
Crystal structure of the receiver domain of CpxR from E. coli (phosphorylated)
Descriptor: MAGNESIUM ION, TRANSCRIPTIONAL REGULATORY PROTEIN CPXR
Authors:Mechaly, A.E, Alzari, P.M.A.
Deposit date:2015-03-24
Release date:2016-04-13
Last modified:2017-06-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Coupling between Autokinase and Phosphotransferase Reactions in a Bacterial Histidine Kinase.
Structure, 25, 2017
4UDT
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BU of 4udt by Molmil
T cell receptor (TRAV22,TRBV7-9) structure
Descriptor: GLYCEROL, PROTEIN TRBV7-9, T-CELL RECEPTOR BETA-2 CHAIN C REGION, ...
Authors:Rodstrom, K.E.J, Regenthal, P, Lindkvist-Petersson, K.
Deposit date:2014-12-11
Release date:2015-06-24
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structure of Staphylococcal Enterotoxin E in Complex with Tcr Defines the Role of Tcr Loop Positioning in Superantigen Recognition.
Plos One, 10, 2015
4UC5
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BU of 4uc5 by Molmil
Neisseria Meningitidis DAH7PS-Phenylalanine regulated
Descriptor: DI(HYDROXYETHYL)ETHER, MANGANESE (II) ION, PHENYLALANINE, ...
Authors:Heyes, L.C, Lang, E.J.M, Parker, E.J.
Deposit date:2014-12-03
Release date:2015-11-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Calculated Pka Variations Expose Dynamic Allosteric Communication Networks.
J.Am.Chem.Soc., 138, 2016
4UOH
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BU of 4uoh by Molmil
Crystallographic structure of nucleoside diphosphate kinase from Litopenaeus vannamei complexed with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, NUCLEOSIDE DIPHOSPHATE KINASE
Authors:Lopez-Zavala, A.A, Guevara-Hernandez, E, Stojanoff, V, Rudino-Pinera, E, Sotelo-Mundo, R.R.
Deposit date:2014-06-03
Release date:2014-09-10
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.007 Å)
Cite:Structure of Nucleoside Diphosphate Kinase from Pacific Shrimp (Litopenaeus Vannamei) in Binary Complexes with Purine and Pyrimidine Nucleoside Diphosphates
Acta Crystallogr.,Sect.F, 79, 2014

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