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PDB: 41371 results

5VT7
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ABA-mimicking ligand AMC1beta in complex with ABA receptor PYL2 and PP2C HAB1
Descriptor: 1-(3-chloro-4-methylphenyl)-N-(2-oxo-1-propyl-1,2,3,4-tetrahydroquinolin-6-yl)methanesulfonamide, Abscisic acid receptor PYL2, MAGNESIUM ION, ...
Authors:Cao, M.-J, Zhang, Y.-L, Liu, X, Huang, H, Zhou, X.E, Wang, W.-L, Zeng, A, Zhao, C.-Z, Si, T, Du, J.-M, Wu, W.-W, Wang, F.-X, Xu, H.X, Zhu, J.-K.
Deposit date:2017-05-15
Release date:2017-11-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.624 Å)
Cite:Combining chemical and genetic approaches to increase drought resistance in plants.
Nat Commun, 8, 2017
3HFU
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BU of 3hfu by Molmil
Crystal structure of the ligand binding domain of E. coli CynR with its specific effector azide
Descriptor: 1,2-ETHANEDIOL, AZIDE ION, HTH-type transcriptional regulator cynR
Authors:Singer, A.U, Evdokimova, E, Kagan, O, Dong, A, Edwards, A.M, Savchenko, A.
Deposit date:2009-05-12
Release date:2009-06-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the ligand binding domain of E. coli CynR with its specific effector azide
TO BE PUBLISHED
6QIP
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BU of 6qip by Molmil
Ternary complex of FcRn ectodomain, FcRn binding optimised human serum albumin and the albumin-biniding side chain of the human growth hormone derivative somapacitan
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, BETA-MERCAPTOETHANOL, Beta-2-microglobulin, ...
Authors:Johansson, E.
Deposit date:2019-01-21
Release date:2020-02-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Identification of Binding Sites on Human Serum Albumin for Somapacitan, a Long-Acting Growth Hormone Derivative.
Biochemistry, 59, 2020
6QDU
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BU of 6qdu by Molmil
Crystal structure of 14-3-3sigma in complex with a RapGef2 pT740 phosphopeptide inhibited by semi-synthetic fusicoccane FC-NCPC
Descriptor: 14-3-3 protein sigma, CHLORIDE ION, FC-NCPC, ...
Authors:Andrei, S.A, Kaplan, A, Fournier, A.E, Ottman, C.
Deposit date:2019-01-02
Release date:2020-01-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.632 Å)
Cite:Polypharmacological Perturbation of the 14-3-3 Adaptor Protein Interactome Stimulates Neurite Outgrowth.
Cell Chem Biol, 27, 2020
7LAO
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BU of 7lao by Molmil
Crystal structure of aminoglycoside acetyltransferase AAC(3)-IIb
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Aminoglycoside N(3)-acetyltransferase III, MAGNESIUM ION
Authors:Stogios, P.J, Evdokimova, E, Osipiuk, J, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-01-06
Release date:2021-01-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structural and molecular rationale for the diversification of resistance mediated by the Antibiotic_NAT family.
Commun Biol, 5, 2022
1SFE
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BU of 1sfe by Molmil
ADA O6-METHYLGUANINE-DNA METHYLTRANSFERASE FROM ESCHERICHIA COLI
Descriptor: ADA O6-METHYLGUANINE-DNA METHYLTRANSFERASE
Authors:Moore, M.H, Gulbis, J.M, Dodson, E.J, Demple, B, Moody, P.C.E.
Deposit date:1996-06-21
Release date:1996-12-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of a suicidal DNA repair protein: the Ada O6-methylguanine-DNA methyltransferase from E. coli.
EMBO J., 13, 1994
8ETE
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BU of 8ete by Molmil
Bile Salt Hydrolase from B. longum with covalent inhibitor bound
Descriptor: (5R)-1-fluoro-5-[(1R,3aS,3bR,5aR,7R,9aS,9bS,11aR)-7-hydroxy-9a,11a-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-1-yl]hexan-2-one (non-preferred name), Conjugated bile acid hydrolase
Authors:Walker, M.E, Redinbo, M.R.
Deposit date:2022-10-17
Release date:2023-11-01
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural diversity of bile salt hydrolases reveals rationale for substrate selectivity
To Be Published
1SC8
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BU of 1sc8 by Molmil
Urokinase Plasminogen Activator B-Chain-J435 Complex
Descriptor: N-(BENZYLSULFONYL)SERYL-N~1~-{4-[AMINO(IMINO)METHYL]BENZYL}GLYCINAMIDE, SULFATE ION, plasminogen activator, ...
Authors:Schweinitz, A, Steinmetzer, T, Banke, I.J, Arlt, M.J.E, Stuerzebecher, A, Schuster, O, Geissler, A, Giersiefen, H, Zeslawska, E, Jacob, U, Kruger, A, Stuerzebecher, J.
Deposit date:2004-02-12
Release date:2004-06-22
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Design of novel and selective inhibitors of urokinase-type plasminogen activator with improved pharmacokinetic properties for use as antimetastatic agents
J.Biol.Chem., 279, 2004
6WTM
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BU of 6wtm by Molmil
Feline coronavirus drug inhibits the main protease of SARS-CoV-2 and blocks virus replication
Descriptor: 3C-like proteinase
Authors:Khan, M.B, Arutyunova, E, Young, H.S, Lemieux, M.J.
Deposit date:2020-05-03
Release date:2020-05-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Feline coronavirus drug inhibits the main protease of SARS-CoV-2 and blocks virus replication.
Nat Commun, 11, 2020
6QF5
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BU of 6qf5 by Molmil
X-Ray structure of human Aquaporin 2 crystallized on a silicon chip
Descriptor: Aquaporin-2, CADMIUM ION
Authors:Lieske, J, Cerv, M, Kreida, S, Barthelmess, M, Fischer, P, Pakendorf, T, Yefanov, O, Mariani, V, Seine, T, Ross, B.H, Crosas, E, Lorbeer, O, Burkhardt, A, Lane, T.J, Guenther, S, Bergtholdt, J, Schoen, S, Tornroth-Horsefield, S, Chapman, H.N, Meents, A.
Deposit date:2019-01-09
Release date:2019-07-10
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:On-chip crystallization for serial crystallography experiments and on-chip ligand-binding studies.
Iucrj, 6, 2019
7B8X
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BU of 7b8x by Molmil
Notum-Fragment 210
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, DIMETHYL SULFOXIDE, Palmitoleoyl-protein carboxylesterase NOTUM, ...
Authors:Zhao, Y, Jonees, E.Y.
Deposit date:2020-12-13
Release date:2022-01-12
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Structural Analysis and Development of Notum Fragment Screening Hits.
Acs Chem Neurosci, 13, 2022
1SD2
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BU of 1sd2 by Molmil
STRUCTURE OF HUMAN 5'-DEOXY-5'-METHYLTHIOADENOSINE PHOSPHORYLASE COMPLEXED WITH 5'-METHYLTHIOTUBERCIDIN
Descriptor: 2-(4-AMINO-PYRROLO[2,3-D]PYRIMIDIN-7-YL)-5-METHYLSULFANYLMETHYL-TETRAHYDRO-FURAN-3,4-DIOL, 5'-methylthioadenosine phosphorylase, SULFATE ION
Authors:Lee, J.E, Settembre, E.C, Cornell, K.A, Riscoe, M.K, Sufrin, J.R, Ealick, S.E, Howell, P.L.
Deposit date:2004-02-12
Release date:2004-05-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Comparison of MTA Phosphorylase and MTA/AdoHcy Nucleosidase Explains Substrate Preferences and Identifies Regions Exploitable for Inhibitor Design.
Biochemistry, 43, 2004
6GU4
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BU of 6gu4 by Molmil
CDK1/CyclinB/Cks2 in complex with CGP74514A
Descriptor: Cyclin-dependent kinase 1, Cyclin-dependent kinases regulatory subunit 2, G2/mitotic-specific cyclin-B1, ...
Authors:Wood, D.J, Korolchuk, S, Tatum, N.J, Wang, L.Z, Endicott, J.A, Noble, M.E.M, Martin, M.P.
Deposit date:2018-06-19
Release date:2018-12-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Differences in the Conformational Energy Landscape of CDK1 and CDK2 Suggest a Mechanism for Achieving Selective CDK Inhibition.
Cell Chem Biol, 26, 2019
6GUH
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BU of 6guh by Molmil
CDK2 in complex with AZD5438
Descriptor: 1,2-ETHANEDIOL, 4-(2-methyl-3-propan-2-yl-imidazol-4-yl)-~{N}-(4-methylsulfonylphenyl)pyrimidin-2-amine, Cyclin-dependent kinase 2
Authors:Wood, D.J, Korolchuk, S, Tatum, N.J, Wang, L.Z, Endicott, J.A, Noble, M.E.M, Martin, M.P.
Deposit date:2018-06-19
Release date:2018-12-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Differences in the Conformational Energy Landscape of CDK1 and CDK2 Suggest a Mechanism for Achieving Selective CDK Inhibition.
Cell Chem Biol, 26, 2019
6QDS
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BU of 6qds by Molmil
Crystal structure of 14-3-3sigma in complex with a PAK6 pT99 phosphopeptide stabilized by semi-synthetic fusicoccane FC-NCPC
Descriptor: 14-3-3 protein sigma, CHLORIDE ION, FC-NCPC, ...
Authors:Andrei, S.A, Kaplan, A, Fournier, A.E, Ottman, C.
Deposit date:2019-01-02
Release date:2020-01-29
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Polypharmacological Perturbation of the 14-3-3 Adaptor Protein Interactome Stimulates Neurite Outgrowth.
Cell Chem Biol, 27, 2020
6GUO
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BU of 6guo by Molmil
Siderophore hydrolase EstA from Aspergillus nidulans
Descriptor: CHLORIDE ION, GLYCEROL, Putative siderophore-degrading esterase (Eurofung), ...
Authors:Ecker, F, Haas, H, Groll, M, Huber, E.M.
Deposit date:2018-06-19
Release date:2018-08-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Iron Scavenging in Aspergillus Species: Structural and Biochemical Insights into Fungal Siderophore Esterases.
Angew. Chem. Int. Ed. Engl., 57, 2018
1J9J
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BU of 1j9j by Molmil
CRYSTAL STRUCTURE ANALYSIS OF SURE PROTEIN FROM T.MARITIMA
Descriptor: MAGNESIUM ION, STATIONARY PHASE SURVIVAL PROTEIN, SULFATE ION
Authors:Suh, S.W, Lee, J.Y, Kwak, J.E, Moon, J.
Deposit date:2001-05-27
Release date:2001-09-12
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure and functional analysis of the SurE protein identify a novel phosphatase family.
Nat.Struct.Biol., 8, 2001
8F2M
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BU of 8f2m by Molmil
Phi-29 scaffolding protein bound to intermediate-state MCP
Descriptor: Capsid assembly scaffolding protein, Major capsid protein
Authors:Woodson, M.E, Morais, M.C, Jardine, P.J, Scott, S.D.
Deposit date:2022-11-08
Release date:2023-11-15
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Scaffold Oligomers Control Prohead Expansion
To Be Published
6QEP
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BU of 6qep by Molmil
EngBF DARPin Fusion 4b H14
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, MANGANESE (II) ION, ...
Authors:Ernst, P, Pluckthun, A, Mittl, P.R.E.
Deposit date:2019-01-08
Release date:2019-11-06
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural analysis of biological targets by host:guest crystal lattice engineering.
Sci Rep, 9, 2019
6GKK
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BU of 6gkk by Molmil
Translation initiation factor 4E in complex with beta-phosphorothioate trinucleotide mRNA 5' cap diastereomer 1 (m7GppSpApG D1)
Descriptor: Eukaryotic translation initiation factor 4E, GLYCEROL, [(2~{R},3~{R},4~{R},5~{R})-5-(2-azanyl-7-methyl-6-oxidanylidene-1~{H}-purin-7-ium-9-yl)-4-methoxy-3-oxidanyl-oxolan-2-yl]methyl [phosphonooxy(sulfanyl)phosphoryl] hydrogen phosphate
Authors:Warminski, M, Nowak, E, Kowalska, J, Jemielity, J, Nowotny, M.
Deposit date:2018-05-21
Release date:2019-06-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.858 Å)
Cite:Translation initiation factor 4E in complex with beta-phosphorothioate trinucleotide mRNA 5' cap diastereomer 1 (m7GppSpApG D1)
To Be Published
4P9O
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BU of 4p9o by Molmil
Complex of Voltage-gated ion channel in a the presence of channel blocking compound
Descriptor: BROMIDE ION, HEGA-10, Ion transport protein
Authors:Naylor, C.E, Bagneris, C, Wallace, B.A.
Deposit date:2014-04-04
Release date:2014-06-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Prokaryotic NavMs channel as a structural and functional model for eukaryotic sodium channel antagonism.
Proc.Natl.Acad.Sci.USA, 111, 2014
7PXZ
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BU of 7pxz by Molmil
Reduced form of SARS-CoV-2 Main Protease determined by XFEL radiation
Descriptor: 3C-like proteinase nsp5, CHLORIDE ION
Authors:Schubert, R, Reinke, P, Galchenkova, M, Oberthuer, D, Murillo, G.E.P, Kim, C, Bean, R, Turk, D, Hinrichs, W, Middendorf, P, Round, A, Schmidt, C, Mills, G, Kirkwood, H, Han, H, Koliyadu, J, Bielecki, J, Gelisio, L, Sikorski, M, Kloos, M, Vakilii, M, Yefanov, O.N, Vagovic, P, de-Wijn, R, Letrun, R, Guenther, S, White, T.A, Sato, T, Srinivasan, V, Kim, Y, Chretien, A, Han, S, Brognaro, H, Maracke, J, Knoska, J, Seychell, B.C, Brings, L, Norton-Baker, B, Geng, T, Dore, A.S, Uetrecht, C, Redecke, L, Beck, T, Lorenzen, K, Betzel, C, Mancuso, A.P, Bajt, S, Chapman, H.N, Meents, A, Lane, T.J.
Deposit date:2021-10-08
Release date:2023-01-18
Last modified:2024-07-31
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:SARS-CoV-2 M pro responds to oxidation by forming disulfide and NOS/SONOS bonds.
Nat Commun, 15, 2024
7PVP
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BU of 7pvp by Molmil
Crystal structure of the SAKe6BC designer protein
Descriptor: SAKe6BC
Authors:Wouters, S.M.L, Noguchi, H, Velpula, G, Clarke, D.E, Voet, A.R.D, De Feyter, S.
Deposit date:2021-10-05
Release date:2023-01-18
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:SAKe: Computationally Designed Modular Protein Building Blocks for Macromolecular Assemblies
To be published
1SHH
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BU of 1shh by Molmil
Slow form of Thrombin Bound with PPACK
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, thrombin
Authors:Pineda, A.O, Carrell, C.J, Bush, L.A, Prasad, S, Caccia, S, Chen, Z.W, Mathews, F.S, Di Cera, E.
Deposit date:2004-02-25
Release date:2004-06-08
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Molecular dissection of na+ binding to thrombin.
J.Biol.Chem., 279, 2004
6GO9
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BU of 6go9 by Molmil
Structure of GFPmut2 crystallized at pH 6 and transferred to pH 7
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, Green fluorescent protein
Authors:Lolli, G, Raboni, S, Pasqualetto, E, Campanini, B, Mozzarelli, A, Bettati, S, Battistutta, R.
Deposit date:2018-06-01
Release date:2018-12-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.672 Å)
Cite:Insight into GFPmut2 pH Dependence by Single Crystal Microspectrophotometry and X-ray Crystallography.
J.Phys.Chem.B, 122, 2018

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