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PDB: 40736 件

6GQY
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KRAS-169 Q61H GPPNHP + CH-3
分子名称: GTPase KRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
著者Cruz-Migoni, A, Quevedo, C.E, Carr, S.B, Phillips, S.V.E, Rabbitts, T.H.
登録日2018-06-08
公開日2019-02-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structure-based development of new RAS-effector inhibitors from a combination of active and inactive RAS-binding compounds.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
8W0X
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Crystal structure of broadly neutralizing antibody hcab40 in complex with Hepatitis C virus envelope glycoprotein E2 ectodomain
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein E2, ...
著者Flyak, A.I, Wilcox, X.E.
登録日2024-02-14
公開日2024-03-27
最終更新日2024-04-17
実験手法X-RAY DIFFRACTION (3.12 Å)
主引用文献Convergent evolution and targeting of diverse E2 epitopes by human broadly neutralizing antibodies are associated with HCV clearance.
Immunity, 57, 2024
6NW1
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Crystal Structure Desulfovibrio desulfuricans Nickel-Substituted Rubredoxin V37N
分子名称: NICKEL (II) ION, Rubredoxin
著者Slater, J.W, Marguet, S.C, Gray, M.E, Sotomayor, M, Shafaat, H.S.
登録日2019-02-05
公開日2019-08-14
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献The Power of the Secondary Sphere: Modulating Hydrogenase Activity in Nickel-Substituted Rubredoxin
Acs Catalysis, 2019
6YVH
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CWC22-CWC27-EIF4A3 Complex
分子名称: Eukaryotic initiation factor 4A-III, Pre-mRNA-splicing factor CWC22 homolog, Spliceosome-associated protein CWC27 homolog
著者Basquin, J, Busetto, V, LeHir, H, Conti, E.
登録日2020-04-28
公開日2020-05-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.19 Å)
主引用文献Structural and functional insights into CWC27/CWC22 heterodimer linking the exon junction complex to spliceosomes.
Nucleic Acids Res., 48, 2020
6YWC
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De novo designed protein 4E1H_95 in complex with 101F antibody
分子名称: Antibody 101F, Heavy Chain, light chain, ...
著者Yang, C, Sesterhenn, F, Pojer, F, Correia, B.E.
登録日2020-04-29
公開日2020-10-07
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Bottom-up de novo design of functional proteins with complex structural features.
Nat.Chem.Biol., 17, 2021
6Q3Y
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Crystal structure of the first bromodomain of human BRD4 in complex with the inhibitor 16i
分子名称: (7~{R})-2-[[2-ethoxy-4-(1-methylpiperidin-4-yl)phenyl]amino]-7-ethyl-5-methyl-8-(phenylmethyl)-7~{H}-pteridin-6-one, 1,2-ETHANEDIOL, Bromodomain-containing protein 4
著者Heidenreich, D, Watts, E, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Knapp, S, Hoelder, S, Structural Genomics Consortium (SGC)
登録日2018-12-04
公開日2019-03-06
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Designing Dual Inhibitors of Anaplastic Lymphoma Kinase (ALK) and Bromodomain-4 (BRD4) by Tuning Kinase Selectivity.
J.Med.Chem., 62, 2019
7ADP
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Cryo-EM structure of human ER membrane protein complex in GDN detergent
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ER membrane protein complex subunit 1, ER membrane protein complex subunit 10, ...
著者Braeuning, B, Prabu, J.R, Miller-Vedam, L.E, Weissman, J.S, Frost, A, Schulman, B.A.
登録日2020-09-15
公開日2020-12-02
最終更新日2020-12-09
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural and mechanistic basis of the EMC-dependent biogenesis of distinct transmembrane clients.
Elife, 9, 2020
8V4Y
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Cryo-EM structure of singly-bound SNF2h-nucleosome complex with SNF2h at inactive SHL2 (conformation 1)
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Histone H2A type 1, ...
著者Chio, U.S, Palovcak, E, Armache, J.P, Narlikar, G.J, Cheng, Y.
登録日2023-11-29
公開日2024-03-20
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Functionalized graphene-oxide grids enable high-resolution cryo-EM structures of the SNF2h-nucleosome complex without crosslinking.
Nat Commun, 15, 2024
5M4R
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Structural tuning of CD81LEL (space group C2)
分子名称: 1,2-ETHANEDIOL, CD81 antigen, SULFATE ION
著者Cunha, E.S, Sfriso, P, Rojas, A.L, Roversi, P, Hospital, A, Orozco, M, Abrescia, N.G.
登録日2016-10-19
公開日2016-12-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Mechanism of Structural Tuning of the Hepatitis C Virus Human Cellular Receptor CD81 Large Extracellular Loop.
Structure, 25, 2017
7QDU
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BU of 7qdu by Molmil
Twist-corrected RNA origami 5-helix Tile A
分子名称: Chains: Q
著者McRae, E.K.S, Andersen, E.S.
登録日2021-11-30
公開日2022-12-14
最終更新日2023-12-13
実験手法ELECTRON MICROSCOPY (5.14 Å)
主引用文献Structure, folding and flexibility of co-transcriptional RNA origami.
Nat Nanotechnol, 18, 2023
6ZPM
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BU of 6zpm by Molmil
Crystal structure of the unconventional kinetochore protein Trypanosoma cruzi KKT4 coiled coil domain
分子名称: THREONINE, Trypanosoma cruzi KKT4 117-218
著者Ludzia, P, Lowe, D.E, Marciano, G, Mohammed, S, Redfield, C, Akiyoshi, B.
登録日2020-07-08
公開日2020-10-21
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural characterization of KKT4, an unconventional microtubule-binding kinetochore protein.
Structure, 29, 2021
8A5V
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Crystal structure of the human phosposerine aminotransferase (PSAT)
分子名称: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, Phosphoserine aminotransferase, SULFATE ION
著者Costanzi, E, Demitri, N, Ullah, R, Marchesan, F, Peracchi, A, Zangelmi, E, Storici, P, Campanini, B.
登録日2022-06-16
公開日2023-03-29
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献L-serine biosynthesis in the human central nervous system: Structure and function of phosphoserine aminotransferase.
Protein Sci., 32, 2023
8V6V
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Cryo-EM structure of doubly-bound SNF2h-nucleosome complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, Histone H2A type 1, Histone H2B, ...
著者Chio, U.S, Palovcak, E, Armache, J.P, Narlikar, G.J, Cheng, Y.
登録日2023-12-03
公開日2024-03-20
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Functionalized graphene-oxide grids enable high-resolution cryo-EM structures of the SNF2h-nucleosome complex without crosslinking.
Nat Commun, 15, 2024
7QDP
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Crystal structure of FLT3 T343I in complex with the canonical ligand FL
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fms-related tyrosine kinase 3 ligand, ...
著者Pannecoucke, E, Savvides, S.N.
登録日2021-11-27
公開日2022-12-14
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.691 Å)
主引用文献Crystal structure of FLT3 T343I in complex with the canonical ligand FL
To Be Published
6NYB
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BU of 6nyb by Molmil
Structure of a MAPK pathway complex
分子名称: 14-3-3 protein zeta, 5-[(2-fluoro-4-iodophenyl)amino]-N-(2-hydroxyethoxy)imidazo[1,5-a]pyridine-6-carboxamide, ADENOSINE-5'-DIPHOSPHATE, ...
著者Park, E, Rawson, S, Li, K, Jeon, H, Eck, M.J.
登録日2019-02-11
公開日2019-10-09
最終更新日2020-04-22
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Architecture of autoinhibited and active BRAF-MEK1-14-3-3 complexes.
Nature, 575, 2019
6QE5
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BU of 6qe5 by Molmil
Structure of E.coli RlmJ in complex with the natural cofactor product S-adenosyl-homocysteine (SAH)
分子名称: Ribosomal RNA large subunit methyltransferase J, S-ADENOSYL-L-HOMOCYSTEINE
著者Oerum, S, Catala, M, Atdjian, C, Brachet, F, Ponchon, L, Barraud, P, Iannazzo, L, Droogmans, L, Braud, E, Etheve-Quelquejeu, M, Tisne, C.
登録日2019-01-04
公開日2019-03-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Bisubstrate analogues as structural tools to investigate m6A methyltransferase active sites.
Rna Biol., 16, 2019
6G2T
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BU of 6g2t by Molmil
human cardiac myosin binding protein C C1 Ig-domain bound to native cardiac thin filament
分子名称: Actin, cytoplasmic 2, Myosin-binding protein C, ...
著者Risi, C, Belknap, B, Forgacs, E, Harris, S.P, Schroder, G.F, White, H.D, Galkin, V.E.
登録日2018-03-23
公開日2018-10-17
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献N-Terminal Domains of Cardiac Myosin Binding Protein C Cooperatively Activate the Thin Filament.
Structure, 26, 2018
6QIB
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BU of 6qib by Molmil
The crystal structure of Pol2CORE in complex with DNA and an incoming nucleotide, carrying an Fe-S cluster
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DNA polymerase epsilon catalytic subunit A, ...
著者Parkash, V, Johansson, E.
登録日2019-01-18
公開日2019-04-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural evidence for an essential Fe-S cluster in the catalytic core domain of DNA polymerase ε.
Nucleic Acids Res., 47, 2019
8W0V
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Crystal structure of broadly neutralizing antibody hcab55 in complex with Hepatitis C virus envelope glycoprotein E2 ectodomain
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein E2, ...
著者Flyak, A.I, Wilcox, X.E.
登録日2024-02-14
公開日2024-03-27
最終更新日2024-04-17
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Convergent evolution and targeting of diverse E2 epitopes by human broadly neutralizing antibodies are associated with HCV clearance.
Immunity, 57, 2024
6NS3
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Crystal structure of fungal lipoxygenase from Fusarium graminearum. I222 crystal form.
分子名称: FE (II) ION, lipoxygenase
著者Pakhomova, S, Boeglin, W.E, Neau, D.B, Bartlett, S.G, Brash, A.R, Newcomer, M.E.
登録日2019-01-24
公開日2019-03-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.84 Å)
主引用文献An ensemble of lipoxygenase structures reveals novel conformations of the Fe coordination sphere.
Protein Sci., 28, 2019
8W0W
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Crystal structure of broadly neutralizing antibody hcab64 in complex with Hepatitis C virus envelope glycoprotein E2 ectodomain
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein E2, ...
著者Flyak, A.I, Wilcox, X.E.
登録日2024-02-14
公開日2024-03-27
最終更新日2024-04-17
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Convergent evolution and targeting of diverse E2 epitopes by human broadly neutralizing antibodies are associated with HCV clearance.
Immunity, 57, 2024
4Y81
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Yeast 20S proteasome in complex with Ac-PAY-ep
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Ac-PAY-ep, CHLORIDE ION, ...
著者Huber, E.M, Groll, M.
登録日2015-02-16
公開日2015-06-17
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Systematic Analyses of Substrate Preferences of 20S Proteasomes Using Peptidic Epoxyketone Inhibitors.
J.Am.Chem.Soc., 137, 2015
6S52
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The crystal structure of glycogen phosphorylase in complex with 14
分子名称: (2~{R},3~{S},4~{S},5~{R},6~{R})-2-(hydroxymethyl)-6-(5-phenyl-1,2,3,4-tetrazol-2-yl)oxane-3,4,5-triol, Glycogen phosphorylase, muscle form, ...
著者Kyriakis, E, Solovou, T.G.A, Papaioannou, O.S.E, Skamnaki, V.T, Leonidas, D.D.
登録日2019-06-29
公開日2020-02-19
実験手法X-RAY DIFFRACTION (2.37 Å)
主引用文献The architecture of hydrogen and sulfur sigma-hole interactions explain differences in the inhibitory potency of C-beta-d-glucopyranosyl thiazoles, imidazoles and an N-beta-d glucopyranosyl tetrazole for human liver glycogen phosphorylase and offer new insights to structure-based design.
Bioorg.Med.Chem., 28, 2020
7B9H
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Crystal structure of the PDE4D catalytic domain in complex with GEBR-42a
分子名称: 1,2-ETHANEDIOL, 3-[(~{E})-1-(3-cyclopentyloxy-4-methoxy-phenyl)ethylideneamino]oxy-1-morpholin-4-yl-propan-1-one, MAGNESIUM ION, ...
著者Torretta, A, Abbate, S, Parisini, E.
登録日2020-12-14
公開日2021-06-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Design, synthesis, biological evaluation and structural characterization of novel GEBR library PDE4D inhibitors.
Eur.J.Med.Chem., 223, 2021
8T4C
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Membrane-associated thioredoxin oxidoreductase FetE from Campylobacter jejuni
分子名称: GLYCEROL, SULFATE ION, Thioredoxin oxidoreductase
著者Chan, A.C, Murphy, M.E.
登録日2023-06-09
公開日2023-08-09
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Dissecting components of the Campylobacter jejuni fetMP-fetABCDEF gene cluster in iron scavenging.
Biorxiv, 2023

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件を2024-07-31に公開中

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