Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 41042 results

9BJ1
DownloadVisualize
BU of 9bj1 by Molmil
Crystal structure of inhibitor GNE-6893 bound to HPK1
Descriptor: (4S,5R,7R,11aP)-10-{[(3R)-3-hydroxy-1-methyl-2-oxopyrrolidin-3-yl]ethynyl}-N~3~-methyl-6,7-dihydro-5H-5,7-methanoimidazo[2,1-a][2]benzazepine-2,3-dicarboxamide, (9S)-2-{[(6P)-8-amino-6-(5-amino-4-methylpyridin-3-yl)-7-fluoroisoquinolin-3-yl]amino}-6-methyl-5,6-dihydro-4H-pyrazolo[1,5-d][1,4]diazepin-7(8H)-one, 1,2-ETHANEDIOL, ...
Authors:Kiefer, J.R, Tellis, J.C, Chan, B.K, Wang, W, Wu, P, Choo, E.F, Heffron, T.P, Wei, B, Siu, M.
Deposit date:2024-04-24
Release date:2024-10-02
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Discovery of GNE-6893, a Potent, Selective, Orally Bioavailable Small Molecule Inhibitor of HPK1.
Acs Med.Chem.Lett., 15, 2024
2FGG
DownloadVisualize
BU of 2fgg by Molmil
Crystal Structure of Rv2632c
Descriptor: Hypothetical protein Rv2632c/MT2708
Authors:Yu, M, Bursey, E.H, Radhakannan, T, Segelke, B.W, Lekin, T, Toppani, D, Kim, C.Y, Kaviratne, T, Woodruff, T, Terwilliger, T.C, Hung, L.W, TB Structural Genomics Consortium (TBSGC)
Deposit date:2005-12-21
Release date:2006-02-14
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of Rv2632c
To be Published
2FJ6
DownloadVisualize
BU of 2fj6 by Molmil
Solution NMR structure of the UPF0346 protein yozE from Bacillus subtilis. Northeast Structural Genomics target SR391.
Descriptor: Hypothetical UPF0346 protein yozE
Authors:Rossi, P, Acton, T.B, Cunningham, K.E, Ma, L.C, Shetty, K, Swapna, G.V.T, Xiao, R, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2005-12-31
Release date:2006-02-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution NMR structure of the UPF0346 protein yozE from Bacillus subtilis. Northeast Structural Genomics target SR391.
To be Published
2F28
DownloadVisualize
BU of 2f28 by Molmil
Crystal Structure of the Human Sialidase Neu2 Q116E Mutant
Descriptor: CHLORIDE ION, Sialidase 2
Authors:Chavas, L.M.G, Kato, R, Fusi, P, Tringali, C, Venerando, B, Tettamanti, G, Monti, E, Wakatsuki, S.
Deposit date:2005-11-15
Release date:2006-11-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Crystal Structure of the Human Sialidase Neu2 Q116E Mutant
To be Published
2F77
DownloadVisualize
BU of 2f77 by Molmil
Solution structure of the R55F mutant of M-PMV matrix protein (p10)
Descriptor: Core protein p10
Authors:Vlach, J, Lipov, J, Veverka, V, Lang, J, Srb, P, Rumlova, M, Hunter, E, Ruml, T, Hrabal, R.
Deposit date:2005-11-30
Release date:2006-12-05
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:D-retrovirus morphogenetic switch driven by the targeting signal accessibility to Tctex-1 of dynein.
Proc.Natl.Acad.Sci.USA, 105, 2008
2FOI
DownloadVisualize
BU of 2foi by Molmil
Synthesis, Biological Activity, and X-Ray Crystal Structural Analysis of Diaryl Ether Inhibitors of Malarial Enoyl ACP Reductase.
Descriptor: 4-(2,4-DICHLOROPHENOXY)-2'-METHYLBIPHENYL-3-OL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, enoyl-acyl carrier reductase
Authors:Freundlich, J.S, Shieh, H, Anderson, J.W, Kuo, M, Yu, M, Valderramos, J, Karagyozov, L, Tsai, H, Lucumi, E, Jacobs Jr, W.R, Schiehser, G.A, Jacobus, D.P, Fidock, D.A, Sacchettini, J.C.
Deposit date:2006-01-13
Release date:2007-01-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:X-ray Structural Analysis of Plasmodium falciparum Enoyl Acyl Carrier Protein Reductase as a Pathway toward the Optimization of Triclosan Antimalarial Efficacy.
J.Biol.Chem., 282, 2007
2FWQ
DownloadVisualize
BU of 2fwq by Molmil
Reduced enolate chromophore intermediate for Y66H GFP variant
Descriptor: Green fluorescent protein, MAGNESIUM ION
Authors:Barondeau, D.P, Tainer, J.A, Getzoff, E.D.
Deposit date:2006-02-02
Release date:2006-03-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural evidence for an enolate intermediate in GFP fluorophore biosynthesis.
J.Am.Chem.Soc., 128, 2006
2FUB
DownloadVisualize
BU of 2fub by Molmil
Crystal structure of urate oxidase at 140 MPa
Descriptor: 8-AZAXANTHINE, CYSTEINE, Uricase
Authors:Colloc'h, N, Girard, E, Fourme, R.
Deposit date:2006-01-26
Release date:2006-02-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:High pressure macromolecular crystallography: The 140-MPa crystal structure at 2.3 A resolution of urate oxidase, a 135-kDa tetrameric assembly
Biochim.Biophys.Acta, 1764, 2006
2FZF
DownloadVisualize
BU of 2fzf by Molmil
Hypothetical Protein Pfu-1136390-001 From Pyrococcus furiosus
Descriptor: hypothetical protein
Authors:Fu, Z.-Q, Liu, Z.-J, Lee, D, Kelley, L, Chen, L, Tempel, W, Shah, N, Horanyi, P, Lee, H.S, Habel, J, Dillard, B.D, Nguyen, D, Chang, S.-H, Zhang, H, Chang, J, Sugar, F.J, Poole, F.L, Jenney Jr, F.E, Adams, M.W.W, Rose, J.P, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2006-02-09
Release date:2006-02-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Hypothetical Protein Pfu-1136390-001 From Pyrococcus furiosus
To be published
2FV8
DownloadVisualize
BU of 2fv8 by Molmil
The crystal structure of RhoB in the GDP-bound state
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Rho-related GTP-binding protein RhoB
Authors:Turnbull, A.P, Soundararajan, M, Smee, C, Johansson, C, Schoch, G, Gorrec, F, Bray, J, Papagrigoriou, E, von Delft, F, Weigelt, J, Edwards, A, Arrowsmith, C, Sundstrom, M, Doyle, D, Structural Genomics Consortium (SGC)
Deposit date:2006-01-30
Release date:2006-02-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The crystal structure of RhoB in the GDP-bound state
To be Published
2FW3
DownloadVisualize
BU of 2fw3 by Molmil
Crystal structure of rat carnitine palmitoyltransferase 2 in complex with antidiabetic drug ST1326
Descriptor: (3R)-3-{[(TETRADECYLAMINO)CARBONYL]AMINO}-4-(TRIMETHYLAMMONIO)BUTANOATE, Carnitine O-palmitoyltransferase II, mitochondrial
Authors:Rufer, A.C, Thoma, R, Benz, J, Stihle, M, Gsell, B, De Roo, E, Banner, D.W, Mueller, F, Chomienne, O, Hennig, M.
Deposit date:2006-02-01
Release date:2007-02-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of carnitine palmitoyltransferase 2 and implications for diabetes treatment
Structure, 14, 2006
2FR9
DownloadVisualize
BU of 2fr9 by Molmil
NMR structure of the alpha-conotoxin GI (SER12)-benzoylphenylalanine derivative
Descriptor: Alpha-conotoxin GI
Authors:Pashkov, V.S, Maslennikov, I.V, Kasheverov, I.E, Zhmak, M.N, Utkin, Y.N, Tsetlin, V.I, Arseniev, A.S.
Deposit date:2006-01-19
Release date:2006-05-30
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Alpha-Conotoxin GI benzoylphenylalanine derivatives. (1)H-NMR structures and photoaffinity labeling of the Torpedo californica nicotinic acetylcholine receptor.
Febs J., 273, 2006
2FZU
DownloadVisualize
BU of 2fzu by Molmil
Reduced enolate chromophore intermediate for GFP variant
Descriptor: 1,2-ETHANEDIOL, Green fluorescent protein, MAGNESIUM ION
Authors:Barondeau, D.P, Tainer, J.A, Getzoff, E.D.
Deposit date:2006-02-10
Release date:2006-03-14
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structural evidence for an enolate intermediate in GFP fluorophore biosynthesis.
J.Am.Chem.Soc., 128, 2006
2G9J
DownloadVisualize
BU of 2g9j by Molmil
Complex of TM1a(1-14)Zip with TM9a(251-284): a model for the polymerization domain ("overlap region") of tropomyosin, Northeast Structural Genomics Target OR9
Descriptor: Tropomyosin 1 alpha chain, Tropomyosin 1 alpha chain/General control protein GCN4
Authors:Greenfield, N.J, Huang, Y.J, Swapna, G.V.T, Bhattacharya, A, Singh, A, Montelione, G.T, Hitchcock-DeGregori, S.E, Northeast Structural Genomics Consortium (NESG)
Deposit date:2006-03-06
Release date:2006-11-07
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution NMR Structure of the Junction between Tropomyosin Molecules: Implications for Actin Binding and Regulation.
J.Mol.Biol., 364, 2006
4V7M
DownloadVisualize
BU of 4v7m by Molmil
The structures of Capreomycin bound to the 70S ribosome.
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Stanley, R.E, Blaha, G.
Deposit date:2009-11-12
Release date:2014-07-09
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:The structures of the anti-tuberculosis antibiotics viomycin and capreomycin bound to the 70S ribosome.
Nat.Struct.Mol.Biol., 17, 2010
4WBX
DownloadVisualize
BU of 4wbx by Molmil
Conserved hypothetical protein PF1771 from Pyrococcus furiosus solved by sulfur SAD using Swiss Light Source data
Descriptor: 2-keto acid:ferredoxin oxidoreductase subunit alpha
Authors:Weinert, T, Waltersperger, S, Olieric, V, Panepucci, E, Chen, L, Rose, J.P, Wang, M, Wang, B.C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2014-09-04
Release date:2014-12-10
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.301 Å)
Cite:Fast native-SAD phasing for routine macromolecular structure determination.
Nat.Methods, 12, 2015
2QFG
DownloadVisualize
BU of 2qfg by Molmil
Solution Structure of the N-terminal SCR-1/5 fragment of Complement Factor H.
Descriptor: Complement factor H
Authors:Okemefuna, A.I, Gilbert, H.E, Griggs, K.M, Ormsby, R.J, Gordon, D.L, Perkins, S.J.
Deposit date:2007-06-27
Release date:2007-09-25
Last modified:2024-02-21
Method:SOLUTION SCATTERING
Cite:The regulatory SCR-1/5 and cell surface-binding SCR-16/20 fragments of factor H reveal partially folded-back solution structures and different self-associative properties.
J.Mol.Biol., 375, 2008
4UYU
DownloadVisualize
BU of 4uyu by Molmil
STRUCTURE OF THE WNT DEACYLASE NOTUM - CRYSTAL FORM I IODIDE COMPLEX - 2.3A
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, IODIDE ION, ...
Authors:Zebisch, M, Jones, E.Y.
Deposit date:2014-09-03
Release date:2015-02-25
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Notum Deacylates Wnt Proteins to Suppress Signalling Activity.
Nature, 519, 2015
4UZ7
DownloadVisualize
BU of 4uz7 by Molmil
STRUCTURE OF THE WNT DEACYLASE NOTUM - CRYSTAL FORM VI - 2.2A
Descriptor: CHLORIDE ION, PROTEIN NOTUM HOMOLOG
Authors:Zebisch, M, Jones, E.Y.
Deposit date:2014-09-04
Release date:2015-02-25
Last modified:2015-03-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Notum Deacylates Wnt Proteins to Suppress Signalling Activity.
Nature, 519, 2015
2QSV
DownloadVisualize
BU of 2qsv by Molmil
Crystal structure of protein of unknown function from Porphyromonas gingivalis W83
Descriptor: SODIUM ION, SULFATE ION, Uncharacterized protein
Authors:Binkowski, T.A, Duggan, E, Shui, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-07-31
Release date:2007-09-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Protein of unknown function from Porphyromonas gingivalis W83.
TO BE PUBLISHED
2QBV
DownloadVisualize
BU of 2qbv by Molmil
Crystal Structure of Intracellular Chorismate Mutase from Mycobacterium Tuberculosis
Descriptor: CHORISMATE MUTASE
Authors:Ladner, J.E, Reddy, P.T, Kim, S.K, Reddy, S.-K, Nelson, B.C.
Deposit date:2007-06-18
Release date:2007-06-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:A comparative biochemical and structural analysis of the intracellular chorismate mutase (Rv0948c) from Mycobacterium tuberculosis H(37)R(v) and the secreted chorismate mutase (y2828) from Yersinia pestis.
Febs J., 275, 2008
4LWL
DownloadVisualize
BU of 4lwl by Molmil
Crystal structure of methionine sulfoxide reductase U16C/E55A from clostridium oremlandii
Descriptor: ACETATE ION, Peptide methionine sulfoxide reductase MsrA
Authors:Hwang, K.Y, Lee, E.H.
Deposit date:2013-07-27
Release date:2014-06-11
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural analysis of 1-Cys type selenoprotein methionine sulfoxide reductase A
Arch.Biochem.Biophys., 545, 2014
2QDX
DownloadVisualize
BU of 2qdx by Molmil
P.Aeruginosa Fpr with FAD
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin reductase, SULFATE ION
Authors:Han, H, Schonbrunn, E.
Deposit date:2007-06-21
Release date:2007-10-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Biochemical and Structural Characterization of Pseudomonas aeruginosa Bfd and FPR: Ferredoxin NADP(+) Reductase and Not Ferredoxin Is the Redox Partner of Heme Oxygenase under Iron-Starvation Conditions
Biochemistry, 46, 2007
2QIR
DownloadVisualize
BU of 2qir by Molmil
Crystal structure of aminoglycoside acetyltransferase AAC(6')-Ib in complex whith coenzyme A and kanamycin
Descriptor: (1R,2S,3S,4R,6S)-4,6-DIAMINO-3-[(3-AMINO-3-DEOXY-ALPHA-D-GLUCOPYRANOSYL)OXY]-2-HYDROXYCYCLOHEXYL 2,6-DIAMINO-2,6-DIDEOXY-ALPHA-D-GLUCOPYRANOSIDE, Aminoglycoside 6-N-acetyltransferase type Ib11, COENZYME A
Authors:Maurice, F, Broutin, I, Podglajen, I, Benas, P, Collatz, E, Dardel, F.
Deposit date:2007-07-05
Release date:2008-04-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Enzyme structural plasticity and the emergence of broad-spectrum antibiotic resistance.
Embo Rep., 9, 2008
4UZ6
DownloadVisualize
BU of 4uz6 by Molmil
STRUCTURE OF THE WNT DEACYLASE NOTUM - CRYSTAL FORM V - SOS COMPLEX - 1.9A
Descriptor: 1,3,4,6-tetra-O-sulfo-beta-D-fructofuranose-(2-1)-2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Zebisch, M, Jones, E.Y.
Deposit date:2014-09-04
Release date:2015-02-25
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Notum Deacylates Wnt Proteins to Suppress Signalling Activity.
Nature, 519, 2015

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon