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PDB: 59 results

6I31
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BU of 6i31 by Molmil
Crystal structure of the tick chemokine-binding protein Evasin-3
Descriptor: CADMIUM ION, Evasin-3
Authors:Dias, J.M, Shaw, J.P.
Deposit date:2018-11-02
Release date:2019-06-19
Last modified:2019-07-31
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:A knottin scaffold directs the CXC-chemokine-binding specificity of tick evasins.
J.Biol.Chem., 294, 2019
6F25
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BU of 6f25 by Molmil
Crystal structure of human acetylcholinesterase in complex with C35.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Dias, J, Nachon, F.
Deposit date:2017-11-23
Release date:2018-12-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.05199647 Å)
Cite:New evidence for dual binding site inhibitors of acetylcholinesterase as improved drugs for treatment of Alzheimer's disease.
Neuropharmacology, 155, 2019
4CY1
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BU of 4cy1 by Molmil
Crystal structure of the KANSL1-WDR5 complex.
Descriptor: GLYCEROL, KAT8 REGULATORY NSL COMPLEX SUBUNIT 1, WD REPEAT-CONTAINING PROTEIN 5
Authors:Dias, J, Brettschneider, J, Cusack, S, Kadlec, J.
Deposit date:2014-04-09
Release date:2014-05-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural Analysis of the Kansl1/Wdr5/Kansl2 Complex Reveals that Wdr5 is Required for Efficient Assembly and Chromatin Targeting of the Nsl Complex.
Genes Dev., 28, 2014
4CY2
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Crystal structure of the KANSL1-WDR5-KANSL2 complex.
Descriptor: KAT8 REGULATORY NSL COMPLEX SUBUNIT 1, KAT8 REGULATORY NSL COMPLEX SUBUNIT 2, WD REPEAT-CONTAINING PROTEIN 5
Authors:Dias, J, Brettschneider, J, Cusack, S, Kadlec, J.
Deposit date:2014-04-09
Release date:2014-05-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Analysis of the Kansl1/Wdr5/Kansl2 Complex Reveals that Wdr5 is Required for Efficient Assembly and Chromatin Targeting of the Nsl Complex.
Genes Dev., 28, 2014
4CY5
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Crystal structure of the NSL1-WDS-NSL2 complex.
Descriptor: CG4699, ISOFORM D, DIM GAMMA-TUBULIN 1, ...
Authors:Dias, J, Brettschneider, J, Cusack, S, Kadlec, J.
Deposit date:2014-04-10
Release date:2014-05-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Analysis of the Kansl1/Wdr5/Kansl2 Complex Reveals that Wdr5 is Required for Efficient Assembly and Chromatin Targeting of the Nsl Complex.
Genes Dev., 28, 2014
4CY3
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Crystal structure of the NSL1-WDS complex.
Descriptor: CG4699, ISOFORM D, GLYCEROL, ...
Authors:Dias, J, Brettschneider, J, Cusack, S, Kadlec, J.
Deposit date:2014-04-10
Release date:2014-05-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural Analysis of the Kansl1/Wdr5/Kansl2 Complex Reveals that Wdr5 is Required for Efficient Assembly and Chromatin Targeting of the Nsl Complex.
Genes Dev., 28, 2014
8DKB
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BU of 8dkb by Molmil
Crystal Structure of human YEATS4 in complex with Pfizer small molecule compound 3b
Descriptor: N-ethyl-1-{(3S,4S)-1-[(1-hydroxycyclohexyl)methyl]-3-methylpiperidin-4-yl}-2-methyl-1H-benzimidazole-5-carboxamide, YEATS domain-containing protein 4
Authors:Dias, J.M, Byrnes, L.J, Varghese, A.H.
Deposit date:2022-07-05
Release date:2023-01-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Discovery of High-Affinity Small-Molecule Binders of the Epigenetic Reader YEATS4.
J.Med.Chem., 66, 2023
1NML
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BU of 1nml by Molmil
Di-haemic Cytochrome c Peroxidase from Pseudomonas nautica 617, form IN (pH 4.0)
Descriptor: CITRIC ACID, HEME C, di-haem cytochrome c peroxidase
Authors:Dias, J.M, Bonifacio, C, Alves, T, Pereira, A.S, Bourgeois, D, Moura, I, Romao, M.J.
Deposit date:2003-01-10
Release date:2004-01-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for the mechanism of Ca(2+) activation of the di-heme cytochrome c peroxidase from Pseudomonas nautica 617
Structure, 12, 2004
3FPR
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BU of 3fpr by Molmil
Crystal Structure of Evasin-1
Descriptor: Evasin-1
Authors:Dias, J.M, Shaw, J.P.
Deposit date:2009-01-06
Release date:2010-01-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Structural basis of chemokine sequestration by a tick chemokine binding protein: the crystal structure of the complex between Evasin-1 and CCL3
Plos One, 4, 2009
1RZ5
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BU of 1rz5 by Molmil
Di-haem Cytochrome c Peroxidase, Form OUT
Descriptor: CALCIUM ION, Cytochrome c peroxidase, HEME C
Authors:Dias, J.M, Alves, T, Bonifacio, C, Pereira, A.S, Bourgeois, D, Moura, I, Romao, M.J.
Deposit date:2003-12-24
Release date:2004-06-29
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for the mechanism of Ca(2+) activation of the di-heme cytochrome c peroxidase from Pseudomonas nautica 617.
Structure, 12, 2004
1RZ6
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BU of 1rz6 by Molmil
Di-haem Cytochrome c Peroxidase, Form IN
Descriptor: CITRIC ACID, Cytochrome c peroxidase, HEME C
Authors:Dias, J.M, Alves, T, Bonifacio, C, Pereira, A, Bourgeois, D, Moura, I, Romao, M.J.
Deposit date:2003-12-24
Release date:2004-06-29
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for the mechanism of Ca(2+) activation of the di-heme cytochrome c peroxidase from Pseudomonas nautica 617.
Structure, 12, 2004
2NAP
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BU of 2nap by Molmil
DISSIMILATORY NITRATE REDUCTASE (NAP) FROM DESULFOVIBRIO DESULFURICANS
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, IRON/SULFUR CLUSTER, ...
Authors:Dias, J.M, Than, M, Humm, A, Huber, R, Bourenkov, G, Bartunik, H, Bursakov, S, Calvete, J, Caldeira, J, Carneiro, C, Moura, J, Moura, I, Romao, M.J.
Deposit date:1998-09-18
Release date:1999-09-19
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the first dissimilatory nitrate reductase at 1.9 A solved by MAD methods.
Structure Fold.Des., 7, 1999
7S15
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BU of 7s15 by Molmil
GLP-1 receptor bound with Pfizer small molecule agonist
Descriptor: 2-[(4-{6-[(2,4-difluorophenyl)methoxy]pyridin-2-yl}piperidin-1-yl)methyl]-1-[(1-ethyl-1H-imidazol-5-yl)methyl]-1H-benzimidazole-6-carboxylic acid, Glucagon-like peptide 1 receptor
Authors:Liu, Y, Dias, J.M, Han, S.
Deposit date:2021-09-01
Release date:2022-06-08
Last modified:2022-07-06
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:A Small-Molecule Oral Agonist of the Human Glucagon-like Peptide-1 Receptor.
J.Med.Chem., 65, 2022
3S88
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BU of 3s88 by Molmil
Crystal structure of Sudan Ebolavirus Glycoprotein (strain Gulu) bound to 16F6
Descriptor: 16F6 - Heavy chain, 16F6 - Light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Saphire, E.O, Dias, J.M, Bale, S.
Deposit date:2011-05-27
Release date:2011-12-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.351 Å)
Cite:A shared structural solution for neutralizing ebolaviruses.
Nat.Struct.Mol.Biol., 18, 2011
2L47
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BU of 2l47 by Molmil
Solution structure of the PlyG catalytic domain
Descriptor: N-acetylmuramoyl-L-alanine amidase, ZINC ION
Authors:Volkman, B.F, Dias, J.S, Peterson, F.C.
Deposit date:2010-10-01
Release date:2011-10-12
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Tbd
To be Published
7P1N
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BU of 7p1n by Molmil
Crystal structure of human acetylcholinesterase in complex with (2R,3R,4S,5S,6R)-2-{4-[1-(4-{5-hydroxy-6-[(E)-(hydroxyimino)methyl]pyridin-2-yl}butyl)-1H-1,2,3-triazol-4-yl]butoxy}-6-(hydroxymethyl)oxane-3,4,5-triol oxime
Descriptor: (2R,3R,4S,5S,6R)-2-[4-[1-[4-[6-[(Z)-hydroxyiminomethyl]-5-oxidanyl-pyridin-2-yl]butyl]-1,2,3-triazol-4-yl]butoxy]-6-(hydroxymethyl)oxane-3,4,5-triol, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylcholinesterase, ...
Authors:Da Silva, O, Dias, J, Nachon, F.
Deposit date:2021-07-02
Release date:2022-06-08
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:A New Class of Bi- and Trifunctional Sugar Oximes as Antidotes against Organophosphorus Poisoning.
J.Med.Chem., 65, 2022
1H7D
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BU of 1h7d by Molmil
Solution structure of the 49 aa presequence of 5-ALAS
Descriptor: AMINOLEVULINIC ACID SYNTHASE 2, ERYTHROID
Authors:Goodfellow, B.J, Dias, J.S, Ferreira, G.C, Wray, V, Henklein, P, Macedo, A.L.
Deposit date:2001-07-05
Release date:2001-10-18
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The Solution Structure and Heme Binding of the Presequence of Murine 5-Aminolevulinate Synthase
FEBS Lett., 505, 2001
1H7J
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Solution structure of the 26 aa presequence of 5-ALAS
Descriptor: AMINOLEVULINIC ACID SYNTHASE 2, ERYTHROID
Authors:Goodfellow, B.J, Dias, J.S, Ferreira, G.C, Wray, V, Henklein, P, Macedo, A.L.
Deposit date:2001-07-08
Release date:2001-10-18
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The Solution Structure and Heme Binding of the Presequence of Murine 5-Aminolevulinate Synthase
FEBS Lett., 505, 2001
1DGJ
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BU of 1dgj by Molmil
CRYSTAL STRUCTURE OF THE ALDEHYDE OXIDOREDUCTASE FROM DESULFOVIBRIO DESULFURICANS ATCC 27774
Descriptor: ALDEHYDE OXIDOREDUCTASE, FE2/S2 (INORGANIC) CLUSTER, MOLYBDENUM (IV)OXIDE, ...
Authors:Rebelo, J.M, Macieira, S, Dias, J.M, Huber, R, Romao, M.J.
Deposit date:1999-11-24
Release date:2000-03-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Gene sequence and crystal structure of the aldehyde oxidoreductase from Desulfovibrio desulfuricans ATCC 27774.
J.Mol.Biol., 297, 2000
6ZWI
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BU of 6zwi by Molmil
Human butyrylcholinesterase in complex with ((6-((2E,4E)-5-(benzo[d][1,3]dioxol-5-yl)penta-2,4-dienamido)hexyl)triphenylphosphonium bromide)
Descriptor: (2~{E},4~{E})-5-(1,3-benzodioxol-5-yl)-~{N}-[6-(triphenyl-$l^{5}-phosphanyl)hexyl]penta-2,4-dienamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Da Silva, O, Nachon, F, Dias, J, Brazzolotto, X.
Deposit date:2020-07-28
Release date:2021-06-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Fine-Tuning the Biological Profile of Multitarget Mitochondriotropic Antioxidants for Neurodegenerative Diseases.
Antioxidants (Basel), 10, 2021
6ZWE
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BU of 6zwe by Molmil
Crystal structure of human acetylcholinesterase in complex with ((6-((2E,4E)-5-(benzo[d][1,3]dioxol-5-yl)penta-2,4-dienamido)hexyl)triphenylphosphonium bromide)
Descriptor: (2~{E},4~{E})-5-(1,3-benzodioxol-5-yl)-~{N}-[6-(triphenyl-$l^{5}-phosphanyl)hexyl]penta-2,4-dienamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Da Silva, O, Dias, J, Nachon, F, Brazzolotto, X.
Deposit date:2020-07-28
Release date:2021-06-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3 Å)
Cite:Fine-Tuning the Biological Profile of Multitarget Mitochondriotropic Antioxidants for Neurodegenerative Diseases.
Antioxidants (Basel), 10, 2021
3FPT
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BU of 3fpt by Molmil
The Crystal Structure of the Complex between Evasin-1 and CCL3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Evasin-1
Authors:Shaw, J.P, Dias, J.M.
Deposit date:2009-01-06
Release date:2010-01-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of chemokine sequestration by a tick chemokine binding protein: the crystal structure of the complex between Evasin-1 and CCL3
Plos One, 4, 2009
1FL7
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BU of 1fl7 by Molmil
HUMAN FOLLICLE STIMULATING HORMONE
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FOLLICLE STIMULATING PROTEIN ALPHA CHAIN, ...
Authors:Fox, K.M, Dias, J.A, Van Roey, P.
Deposit date:2000-08-11
Release date:2001-03-14
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (3 Å)
Cite:Three-dimensional structure of human follicle-stimulating hormone.
Mol.Endocrinol., 15, 2001
3FPU
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BU of 3fpu by Molmil
The crystallographic structure of the Complex between Evasin-1 and CCL3
Descriptor: C-C motif chemokine 3, Evasin-1, NICKEL (II) ION
Authors:Shaw, J.P, Dias, J.M.
Deposit date:2009-01-06
Release date:2010-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structural basis of chemokine sequestration by a tick chemokine binding protein: the crystal structure of the complex between Evasin-1 and CCL3
Plos One, 4, 2009
1VLB
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BU of 1vlb by Molmil
STRUCTURE REFINEMENT OF THE ALDEHYDE OXIDOREDUCTASE FROM DESULFOVIBRIO GIGAS AT 1.28 A
Descriptor: (MOLYBDOPTERIN-CYTOSINE DINUCLEOTIDE-S,S)-DIOXO-AQUA-MOLYBDENUM(V), ALDEHYDE OXIDOREDUCTASE, CHLORIDE ION, ...
Authors:Rebelo, J.M, Dias, J.M, Huber, R, Moura, J.J.G, Romao, M.J.
Deposit date:2004-07-20
Release date:2004-07-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Structure refinement of the aldehyde oxidoreductase from Desulfovibrio gigas (MOP) at 1.28 A
J.Biol.Inorg.Chem., 6, 2001

 

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