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PDB: 35 results

6YSA
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BU of 6ysa by Molmil
Crystal structure of Arabidopsis thaliana legumain isoform beta in zymogen state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CITRIC ACID, SULFATE ION, ...
Authors:Dall, E, Zauner, F.B, Brandstetter, H.
Deposit date:2020-04-21
Release date:2020-07-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structural and functional studies ofArabidopsis thalianalegumain beta reveal isoform specific mechanisms of activation and substrate recognition.
J.Biol.Chem., 295, 2020
7O50
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BU of 7o50 by Molmil
Crystal structure of human legumain in complex with Gly-Ser-Asn peptide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLY-SER-ASN, ...
Authors:Dall, E, Brandstetter, H.
Deposit date:2021-04-07
Release date:2021-09-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Peptide Ligase Activity of Human Legumain Depends on Fold Stabilization and Balanced Substrate Affinities.
Acs Catalysis, 11, 2021
6FK0
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BU of 6fk0 by Molmil
Xray structure of domain-swapped cystatin E dimer
Descriptor: Cystatin-M
Authors:Dall, E, Brandstetter, H.
Deposit date:2018-01-23
Release date:2018-07-11
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural and functional analysis of cystatin E reveals enzymologically relevant dimer and amyloid fibril states.
J. Biol. Chem., 293, 2018
4FGU
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BU of 4fgu by Molmil
Crystal structure of prolegumain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Legumain
Authors:Dall, E, Brandstetter, H.
Deposit date:2012-06-05
Release date:2013-07-03
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Mechanistic and structural studies on legumain explain its zymogenicity, distinct activation pathways, and regulation.
Proc.Natl.Acad.Sci.USA, 110, 2013
5LU9
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BU of 5lu9 by Molmil
Crystal structure of YVAD-cmk bound human legumain (AEP) in complex with compound 11
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 7-(morpholin-4-yl)-2,1,3-benzoxadiazol-4-amine, AC-TYR-VAL-ALA-ASP-CHLOROMETHYLKETONE, ...
Authors:Dall, E, Ye, K, Brandstetter, H.
Deposit date:2016-09-08
Release date:2017-03-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Inhibition of delta-secretase improves cognitive functions in mouse models of Alzheimer's disease.
Nat Commun, 8, 2017
4AW9
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BU of 4aw9 by Molmil
Crystal structure of active legumain in complex with YVAD-CMK
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACE-TYR-VAL-ALA-ASP-CHLOROMETHYLKETONE, LEGUMAIN, ...
Authors:Dall, E, Brandstetter, H.
Deposit date:2012-06-01
Release date:2013-06-26
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mechanistic and Structural Studies on Legumain Explain its Zymogenicity, Distinct Activation Pathways, and Regulation
Proc.Natl.Acad.Sci.USA, 110, 2013
5LU8
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BU of 5lu8 by Molmil
CRYSTAL STRUCTURE OF YVAD-CMK BOUND HUMAN LEGUMAIN (AEP) IN COMPLEX WITH COMPOUND 11B
Descriptor: 2,4-di(morpholin-4-yl)aniline, 2-acetamido-2-deoxy-beta-D-glucopyranose, AC-TYR-VAL-ALA-ASP-CHLOROMETHYLKETONE, ...
Authors:Dall, E, Ye, K, Brandstetter, H.
Deposit date:2016-09-08
Release date:2017-03-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Inhibition of delta-secretase improves cognitive functions in mouse models of Alzheimer's disease.
Nat Commun, 8, 2017
5LUB
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BU of 5lub by Molmil
Crystal structure of human legumain (AEP) in complex with compound 11
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 7-(morpholin-4-yl)-2,1,3-benzoxadiazol-4-amine, ...
Authors:Dall, E, Ye, K, Brandstetter, H.
Deposit date:2016-09-08
Release date:2017-03-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Inhibition of delta-secretase improves cognitive functions in mouse models of Alzheimer's disease.
Nat Commun, 8, 2017
4AWA
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BU of 4awa by Molmil
Crystal structure of active legumain in complex with YVAD-CMK at pH 5.0
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, LEGUMAIN, SULFATE ION, ...
Authors:Dall, E, Brandstetter, H.
Deposit date:2012-06-01
Release date:2013-06-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Mechanistic and Structural Studies on Legumain Explain its Zymogenicity, Distinct Activation Pathways, and Regulation
Proc.Natl.Acad.Sci.USA, 110, 2013
4AWB
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BU of 4awb by Molmil
Crystal structure of active legumain in complex with AAN-CMK
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, LEGUMAIN, MERCURY (II) ION, ...
Authors:Dall, E, Brandstetter, H.
Deposit date:2012-06-01
Release date:2013-06-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Mechanistic and Structural Studies on Legumain Explain its Zymogenicity, Distinct Activation Pathways, and Regulation
Proc.Natl.Acad.Sci.USA, 110, 2013
5LUA
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BU of 5lua by Molmil
Crystal structure of human legumain (AEP) in complex with compound 11b
Descriptor: 2,4-di(morpholin-4-yl)aniline, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Dall, E, Ye, K, Brandstetter, H.
Deposit date:2016-09-08
Release date:2017-03-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Inhibition of delta-secretase improves cognitive functions in mouse models of Alzheimer's disease.
Nat Commun, 8, 2017
4N6O
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BU of 4n6o by Molmil
Crystal structure of reduced legumain in complex with cystatin E/M
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, IODIDE ION, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Dall, E, Brandstetter, H.
Deposit date:2013-10-14
Release date:2015-02-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure and mechanism of an aspartimide-dependent Peptide ligase in human legumain.
Angew.Chem.Int.Ed.Engl., 54, 2015
4N6M
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BU of 4n6m by Molmil
Crystal structure of human cystatin E/M produced in LEXSY
Descriptor: Cystatin-M, SULFATE ION
Authors:Dall, E, Brandstetter, H.
Deposit date:2013-10-14
Release date:2015-02-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure and mechanism of an aspartimide-dependent Peptide ligase in human legumain.
Angew.Chem.Int.Ed.Engl., 54, 2015
4N6N
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BU of 4n6n by Molmil
Crystal structure of oxidized legumain in complex with cystatin E/M
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cystatin-M, IODIDE ION, ...
Authors:Dall, E, Brandstetter, H.
Deposit date:2013-10-14
Release date:2015-02-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structure and mechanism of an aspartimide-dependent Peptide ligase in human legumain.
Angew.Chem.Int.Ed.Engl., 54, 2015
4N6L
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BU of 4n6l by Molmil
Crystal structure of human cystatin E/M
Descriptor: Cystatin-M
Authors:Dall, E, Brandstetter, H.
Deposit date:2013-10-14
Release date:2015-02-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.952 Å)
Cite:Structure and mechanism of an aspartimide-dependent Peptide ligase in human legumain.
Angew.Chem.Int.Ed.Engl., 54, 2015
8AE4
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BU of 8ae4 by Molmil
Crystal structure of human legumain in complex with Clitocypin 2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Clitocypin-2, ...
Authors:Elamin, T, Brandstetter, H, Dall, E.
Deposit date:2022-07-12
Release date:2022-09-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structural and functional studies of legumain-mycocypin complexes revealed a competitive, exosite-regulated mode of interaction.
J.Biol.Chem., 298, 2022
8AE5
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BU of 8ae5 by Molmil
Crystal structure of human legumain in complex with macrocypin 1a
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Legumain, ...
Authors:Elamin, T, Brandstetter, H, Dall, E.
Deposit date:2022-07-12
Release date:2022-09-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structural and functional studies of legumain-mycocypin complexes revealed a competitive, exosite-regulated mode of interaction.
J.Biol.Chem., 298, 2022
6N3S
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BU of 6n3s by Molmil
Crystal structure of apo-cruzain
Descriptor: 1,2-ETHANEDIOL, Cruzipain, PHOSPHATE ION
Authors:Silva, E.B, Dall, E, Rodrigues, F.T.G, Ferreira, R.S, Brandstetter, H.
Deposit date:2018-11-16
Release date:2019-05-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.193 Å)
Cite:Cruzain structures: apocruzain and cruzain bound to S-methyl thiomethanesulfonate and implications for drug design.
Acta Crystallogr.,Sect.F, 75, 2019
6O2X
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BU of 6o2x by Molmil
Structure of cruzain bound to MMTS inhibitor
Descriptor: 1,2-ETHANEDIOL, Cruzipain, PHOSPHATE ION
Authors:Silva, E.B, Dall, E, Ferreira, R.S, Brandstetter, H.
Deposit date:2019-02-25
Release date:2019-05-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.193 Å)
Cite:Cruzain structures: apocruzain and cruzain bound to S-methyl thiomethanesulfonate and implications for drug design.
Acta Crystallogr.,Sect.F, 75, 2019
5NIJ
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BU of 5nij by Molmil
Crystal structure of arabidopsis thaliana legumain isoform gamma in two-chain activation state
Descriptor: CITRIC ACID, SULFATE ION, Vacuolar-processing enzyme gamma-isozyme
Authors:Zauner, F.B, Dall, E, Brandstetter, H.
Deposit date:2017-03-24
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal Structure of Plant Legumain Reveals a Unique Two-Chain State with pH-Dependent Activity Regulation.
Plant Cell, 30, 2018
5OBT
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BU of 5obt by Molmil
Fully activated A. thaliana legumain isoform gamma in complex with Ac-YVAD-CMK
Descriptor: Ac-YVAD-CMK, Vacuolar-processing enzyme gamma-isozyme
Authors:Zauner, B.F, Dall, E, Brandstetter, H.
Deposit date:2017-06-29
Release date:2018-04-11
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural analyses ofArabidopsis thalianalegumain gamma reveal differential recognition and processing of proteolysis and ligation substrates.
J. Biol. Chem., 293, 2018
6EF0
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BU of 6ef0 by Molmil
Yeast 26S proteasome bound to ubiquitinated substrate (1D* motor state)
Descriptor: 26S proteasome regulatory subunit 4 homolog, 26S proteasome regulatory subunit 6A, 26S proteasome regulatory subunit 6B homolog, ...
Authors:de la Pena, A.H, Goodall, E.A, Gates, S.N, Lander, G.C, Martin, A.
Deposit date:2018-08-15
Release date:2018-10-17
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (4.43 Å)
Cite:Substrate-engaged 26Sproteasome structures reveal mechanisms for ATP-hydrolysis-driven translocation.
Science, 362, 2018
7A2D
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BU of 7a2d by Molmil
Structure-function analyses of dual-BON domain protein DolP identifies phospholipid binding as a new mechanism for protein localisation to the cell division site
Descriptor: Uncharacterized protein YraP
Authors:Bryant, J.A, Morris, F.C, Knowles, T.J, Maderbocus, R, Heinz, E, Boelter, G, Alodaini, D, Colyer, A, Wotherspoon, P.J, Staunton, K.A, Jeeves, M, Browning, D.F, Sevastsyanovich, Y.R, Wells, T.J, Rossiter, A.E, Bavro, V.N, Sridhar, P, Ward, D.G, Chong, Z.S, Goodall, E.C.A, Icke, C, Teo, A, Chng, S.S, Roper, D.I, Lithgow, T, Cunningham, A.F, Banzhaf, M, Overduin, M, Henderson, I.R.
Deposit date:2020-08-17
Release date:2020-12-30
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of dual BON-domain protein DolP identifies phospholipid binding as a new mechanism for protein localisation.
Elife, 9, 2020
1I60
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BU of 1i60 by Molmil
Structural genomics, IOLI protein
Descriptor: IOLI PROTEIN
Authors:Zhang, R, Dementieva, I, Collart, F, Quaite-Randall, E, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2001-03-01
Release date:2002-03-13
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of Bacillus subtilis ioli shows endonuclase IV fold with altered Zn binding.
Proteins, 48, 2002
1I6N
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BU of 1i6n by Molmil
1.8 A Crystal structure of IOLI protein with a binding zinc atom
Descriptor: IOLI PROTEIN, ZINC ION
Authors:Zhang, R.G, Dementiva, I, Collart, F, Quaite-Randall, E, Joachimiak, A, Alkire, R, Maltsev, N, Korolev, O, Dieckman, L, Midwest Center for Structural Genomics (MCSG)
Deposit date:2001-03-02
Release date:2002-03-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of Bacillus subtilis ioli shows endonuclase IV fold with altered Zn binding.
Proteins, 48, 2002

 

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