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PDB: 3048 results

4V7H
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Structure of the 80S rRNA and proteins and P/E tRNA for eukaryotic ribosome based on cryo-EM map of Thermomyces lanuginosus ribosome at 8.9A resolution
Descriptor: 18S rRNA, 26S ribosomal RNA, 40S ribosomal protein S0(A), ...
Authors:Taylor, D.J, Devkota, B, Huang, A.D, Topf, M, Narayanan, E, Sali, A, Harvey, S.C, Frank, J.
Deposit date:2009-09-22
Release date:2014-07-09
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (8.9 Å)
Cite:Comprehensive molecular structure of the eukaryotic ribosome.
Structure, 17, 2009
2PLV
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STRUCTURAL FACTORS THAT CONTROL CONFORMATIONAL TRANSITIONS AND SEROTYPE SPECIFICITY IN TYPE 3 POLIOVIRUS
Descriptor: HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP1), HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP2), HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP3), ...
Authors:Filman, D.J, Hogle, J.M.
Deposit date:1989-10-17
Release date:1989-10-17
Last modified:2023-04-19
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:Structural factors that control conformational transitions and serotype specificity in type 3 poliovirus
EMBO J., 8, 1989
7SLS
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BU of 7sls by Molmil
HIV Reverse Transcriptase with compound Pyr02
Descriptor: 5-(difluoromethyl)-3-{[1-{[(3S)-5-fluoro-2-methyl-6-oxo-3,6-dihydropyridin-3-yl]methyl}-6-oxo-4-(1,1,2,2-tetrafluoroethyl)-1,6-dihydropyrimidin-5-yl]oxy}-2-methylbenzonitrile, Reverse transcriptase/ribonuclease H
Authors:Klein, D.J, Zebisch, M, Gu, M.
Deposit date:2021-10-24
Release date:2022-11-23
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.078 Å)
Cite:Potent targeted activator of cell kill molecules eliminate cells expressing HIV-1.
Sci Transl Med, 15, 2023
7SLR
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HIV Reverse Transcriptase with compound Pyr01
Descriptor: 5-(difluoromethyl)-3-({1-[(5-fluoro-2-oxo-1,2-dihydropyridin-3-yl)methyl]-6-oxo-4-(1,1,2,2-tetrafluoroethyl)-1,6-dihydropyrimidin-5-yl}oxy)-2-methylbenzonitrile, Reverse transcriptase/ribonuclease H
Authors:Klein, D.J, Zebisch, M, Gu, M.
Deposit date:2021-10-24
Release date:2022-11-23
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.179 Å)
Cite:Potent targeted activator of cell kill molecules eliminate cells expressing HIV-1.
Sci Transl Med, 15, 2023
6EDB
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Crystal structure of SRY.hcGAS-21bp dsDNA complex
Descriptor: DNA (5'-D(*CP*GP*AP*TP*CP*CP*GP*GP*GP*AP*TP*CP*TP*AP*AP*AP*CP*AP*AP*TP*G)-3'), DNA (5'-D(*GP*CP*AP*TP*TP*GP*TP*TP*TP*AP*GP*AP*TP*CP*CP*CP*GP*GP*AP*TP*C)-3'), Sex-determining region Y protein,Cyclic GMP-AMP synthase, ...
Authors:Xie, W, Lama, L, Adura, C, Glickman, J.F, Tuschl, T, Patel, D.J.
Deposit date:2018-08-09
Release date:2019-05-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.209 Å)
Cite:Human cGAS catalytic domain has an additional DNA-binding interface that enhances enzymatic activity and liquid-phase condensation.
Proc.Natl.Acad.Sci.USA, 116, 2019
3AKJ
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Crystal structure of A Helicobacter pylori proinflammatory kinase CtkA
Descriptor: CtkA
Authors:Kim, D.J, Suh, S.W.
Deposit date:2010-07-14
Release date:2010-12-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Helicobacter pylori proinflammatory protein up-regulates NF-kappaB as a cell-translocating Ser/Thr kinase
Proc.Natl.Acad.Sci.USA, 107, 2010
3AKL
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BU of 3akl by Molmil
Crystal structure of A Helicobacter pylori proinflammatory kinase CtkA
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Ctka, MAGNESIUM ION, ...
Authors:Kim, D.J, Suh, S.W.
Deposit date:2010-07-14
Release date:2010-12-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Helicobacter pylori proinflammatory protein up-regulates NF-kappaB as a cell-translocating Ser/Thr kinase
Proc.Natl.Acad.Sci.USA, 107, 2010
6F0K
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Alternative complex III
Descriptor: ActD, ActF, ActH, ...
Authors:Sousa, J.S, Calisto, F, Mills, D.J, Pereira, M.M, Vonck, J, Kuehlbrandt, W.
Deposit date:2017-11-20
Release date:2018-05-09
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.87 Å)
Cite:Structural basis for energy transduction by respiratory alternative complex III.
Nat Commun, 9, 2018
7T69
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BU of 7t69 by Molmil
Crystal structure of Avr3 (SIX1) from Fusarium oxysporum f. sp. lycopersici
Descriptor: Avr3 (SIX1), Secreted in xylem 1, SULFATE ION
Authors:Yu, D.S, Outram, M.A, Ericsson, D.J, Jones, D.A, Williams, S.J.
Deposit date:2021-12-13
Release date:2023-01-11
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:The structural repertoire of Fusarium oxysporum f. sp. lycopersici effectors revealed by experimental and computational studies
Elife, 2023
7T6A
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BU of 7t6a by Molmil
Crystal structure of Avr1 (SIX4) from Fusarium oxysporum f. sp. lycopersici
Descriptor: Avr1 (FolSIX4), Avirulence protein 1, Avr1 (SIX4), ...
Authors:Yu, D.S, Outram, M.A, Ericsson, D.J, Jones, D.A, Williams, S.J.
Deposit date:2021-12-13
Release date:2023-01-11
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The structural repertoire of Fusarium oxysporum f. sp. lycopersici effectors revealed by experimental and computational studies
Elife, 2023
3AKK
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BU of 3akk by Molmil
Crystal structure of A Helicobacter pylori proinflammatory kinase CtkA
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CtkA, MAGNESIUM ION
Authors:Kim, D.J, Suh, S.W.
Deposit date:2010-07-14
Release date:2010-12-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Helicobacter pylori proinflammatory protein up-regulates NF-kappaB as a cell-translocating Ser/Thr kinase
Proc.Natl.Acad.Sci.USA, 107, 2010
6F24
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BU of 6f24 by Molmil
PH domain from PfAPH
Descriptor: C-terminal PH domain from PfAPH
Authors:Darvill, N, Liu, B, Matthews, S, Soldati-Favre, D, Rouse, S, Benjamin, S, Blake, T, Dubois, D.J, Hammoudi, P.M, Pino, P.
Deposit date:2017-11-23
Release date:2018-12-12
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:C-terminal PH domain from P. falciparum acylated plekstrin homology domain containing protein (APH)
To Be Published
1DNL
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BU of 1dnl by Molmil
X-RAY STRUCTURE OF ESCHERICHIA COLI PYRIDOXINE 5'-PHOSPHATE OXIDASE COMPLEXED WITH FMN AT 1.8 ANGSTROM RESOLUTION
Descriptor: FLAVIN MONONUCLEOTIDE, PHOSPHATE ION, PYRIDOXINE 5'-PHOSPHATE OXIDASE
Authors:Safo, M.K, Mathews, I, Musayev, F.N, di Salvo, M.L, Thiel, D.J, Abraham, D.J, Schirch, V.
Deposit date:1999-12-16
Release date:2000-01-05
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray structure of Escherichia coli pyridoxine 5'-phosphate oxidase complexed with FMN at 1.8 A resolution.
Structure Fold.Des., 8, 2000
1DWW
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BU of 1dww by Molmil
MURINE INDUCIBLE NITRIC OXIDE SYNTHASE OXYGENASE DIMER N-hydroxyarginine and dihydrobiopterin
Descriptor: 2-AMINO-6-(1,2-DIHYDROXY-PROPYL)-7,8-DIHYDRO-6H-PTERIDIN-4-ONE, N-OMEGA-HYDROXY-L-ARGININE, NITRIC OXIDE SYNTHASE, ...
Authors:Crane, B.R, Arvai, A.S, Getzoff, E.D, Stuehr, D.J, Tainer, J.A.
Deposit date:1999-12-14
Release date:2000-02-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structures of the N(Omega)-Hydroxy-L-Arginine Complex of Inducible Nitric Oxide Synthase Oxygenase Dimer with Active Andinactive Pterins
Biochemistry, 39, 2000
1DWX
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BU of 1dwx by Molmil
MURINE INDUCIBLE NITRIC OXIDE SYNTHASE OXYGENASE DIMER N-hydroxyarginine and tetrahydrobiopterin
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, N-OMEGA-HYDROXY-L-ARGININE, NITRIC OXIDE SYNTHASE, ...
Authors:Crane, B.R, Arvai, A.S, Getzoff, E.D, Stuehr, D.J, Tainer, J.A.
Deposit date:1999-12-14
Release date:2000-02-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures of the N(Omega)-Hydroxy-L-Arginine Complex of Inducible Nitric Oxide Synthase Oxygenase Dimer with Active Andinactive Pterins
Biochemistry, 39, 2000
1DWV
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BU of 1dwv by Molmil
MURINE INDUCIBLE NITRIC OXIDE SYNTHASE OXYGENASE DIMER N-hydroxyarginine and 4-amino tetrahydrobiopterin
Descriptor: 2,4-DIAMINO-6-[2,3-DIHYDROXY-PROP-3-YL]-5,6,7,8-TETRAHYDROPTERIDINE, N-OMEGA-HYDROXY-L-ARGININE, NITRIC OXIDE SYNTHASE, ...
Authors:Crane, B.R, Arvai, A.S, Getzoff, E.D, Stuehr, D.J, Tainer, J.A.
Deposit date:1999-12-14
Release date:2000-02-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structures of the N(Omega)-Hydroxy-L-Arginine Complex of Inducible Nitric Oxide Synthase Oxygenase Dimer with Active Andinactive Pterins
Biochemistry, 39, 2000
1EWS
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BU of 1ews by Molmil
THE THREE-DIMENSIONAL SOLUTION STRUCTURE OF THE RABBIT KIDNEY DEFENSIN, RK-1
Descriptor: RK-1 DEFENSIN
Authors:McManus, A.M, Dawson, N.F, Wade, J.D, Craik, D.J.
Deposit date:2000-04-26
Release date:2001-05-02
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Three-dimensional structure of RK-1: a novel alpha-defensin peptide.
Biochemistry, 39, 2000
3S85
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BU of 3s85 by Molmil
Discovery of New HIV Protease Inhibitors with Potential for Convenient Dosing and Reduced Side Effects: A-790742 and A-792611.
Descriptor: Protease/reverse transcriptase, methyl N-[(2S)-1-[[(2S,3S,5S)-5-[[(2S)-2-(methoxycarbonylamino)-3,3-dimethyl-butanoyl]amino]-3-oxidanyl-6-phenyl-1-(4-pyridin-3-ylphenyl)hexan-2-yl]amino]-3,3-dimethyl-1-oxidanylidene-butan-2-yl]carbamate
Authors:DeGoey, D.A, Flosi, W.J, Grampovnik, D.J, Flentge, C.A.
Deposit date:2011-05-27
Release date:2012-04-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:2-Pyridyl P1'-substituted symmetry-based human immunodeficiency virus protease inhibitors (A-792611 and A-790742) with potential for convenient dosing and reduced side effects.
J.Med.Chem., 52, 2009
5OO3
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BU of 5oo3 by Molmil
Cdk2(F80C, C177A) with covalent ligand at F80C
Descriptor: 1-(4-ethyl-2,3-dihydroquinoxalin-1-yl)propan-1-one, Cyclin-dependent kinase 2
Authors:Craven, G, Morgan, R.M.L, Mann, D.J.
Deposit date:2017-08-05
Release date:2018-08-29
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:High-throughput kinetic analysis for target-directed covalent ligand discovery
To Be Published
5OSM
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BU of 5osm by Molmil
Cdk2(F80C, C177A) with covalent adduct at C80
Descriptor: Cyclin-dependent kinase 2, methyl 1-propanoyl-3,4-dihydro-2~{H}-quinoline-6-carboxylate
Authors:Craven, G, Morgan, R.M.L, Mann, D.J.
Deposit date:2017-08-17
Release date:2018-03-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:High-Throughput Kinetic Analysis for Target-Directed Covalent Ligand Discovery.
Angew. Chem. Int. Ed. Engl., 57, 2018
5OSJ
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BU of 5osj by Molmil
Cdk2(WT) with covalent adduct at C177
Descriptor: Cyclin-dependent kinase 2, ~{tert}-butyl 4-propanoyl-2,3-dihydroquinoxaline-1-carboxylate
Authors:Craven, G, Morgan, R.M.L, Mann, D.J.
Deposit date:2017-08-17
Release date:2018-03-14
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:High-Throughput Kinetic Analysis for Target-Directed Covalent Ligand Discovery.
Angew. Chem. Int. Ed. Engl., 57, 2018
5OSN
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BU of 5osn by Molmil
Crystal Structure of Bovine Enterovirus 2 determined with Serial Femtosecond X-ray Crystallography
Descriptor: Capsid protein, GLUTAMIC ACID, POTASSIUM ION, ...
Authors:Roedig, P, Ginn, H.M, Pakendorf, T, Sutton, G, Harlos, K, Walter, T.S, Meyer, J, Fischer, P, Duman, R, Vartiainen, I, Reime, B, Warmer, M, Brewster, A.S, Young, I.D, Michels-Clark, T, Sauter, N.K, Kotecha, A, Kelly, J, Rowlands, D.J, Sikorsky, M, Nelson, S, Damiani, D.S, Alonso-Mori, R, Ren, J, Fry, E.E, David, C, Stuart, D.I, Wagner, A, Meents, A.
Deposit date:2017-08-17
Release date:2017-08-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:High-speed fixed-target serial virus crystallography.
Nat. Methods, 14, 2017
5BXA
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BU of 5bxa by Molmil
Structure of PslG from Pseudomonas aeruginosa in complex with mannose
Descriptor: 1,2-ETHANEDIOL, CADMIUM ION, CHLORIDE ION, ...
Authors:Baker, P, Little, D.J, Howell, P.L.
Deposit date:2015-06-08
Release date:2015-10-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Characterization of the Pseudomonas aeruginosa Glycoside Hydrolase PslG Reveals That Its Levels Are Critical for Psl Polysaccharide Biosynthesis and Biofilm Formation.
J.Biol.Chem., 290, 2015
5BX9
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BU of 5bx9 by Molmil
Structure of PslG from Pseudomonas aeruginosa
Descriptor: 1,2-ETHANEDIOL, CADMIUM ION, CHLORIDE ION, ...
Authors:Baker, P, Little, D.J, Howell, P.L.
Deposit date:2015-06-08
Release date:2015-10-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Characterization of the Pseudomonas aeruginosa Glycoside Hydrolase PslG Reveals That Its Levels Are Critical for Psl Polysaccharide Biosynthesis and Biofilm Formation.
J.Biol.Chem., 290, 2015
2H8S
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BU of 2h8s by Molmil
Solution structure of alpha-conotoxin Vc1.1
Descriptor: Alpha-conotoxin Vc1A
Authors:Clark, R.J, Fischer, H, Nevin, S.T, Adams, D.J, Craik, D.J.
Deposit date:2006-06-07
Release date:2006-06-27
Last modified:2024-10-09
Method:SOLUTION NMR
Cite:The Synthesis, Structural Characterization, and Receptor Specificity of the {alpha}-Conotoxin Vc1.1.
J.Biol.Chem., 281, 2006

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數據於2024-11-06公開中

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