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PDB: 3021 件

1C49
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STRUCTURAL AND FUNCTIONAL DIFFERENCES OF TWO TOXINS FROM THE SCORPION PANDINUS IMPERATOR
分子名称: TOXIN K-BETA
著者Klenk, K.C, Tenenholz, T.C, Matteson, D.R, Rogowski, R.S, Blaustein, M.P, Weber, D.J.
登録日1999-08-17
公開日2000-03-22
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Structural and functional differences of two toxins from the scorpion Pandinus imperator.
Proteins, 38, 2000
6ZGH
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Furin Cleaved Spike Protein of SARS-CoV-2 in Intermediate Conformation
分子名称: Spike glycoprotein
著者Wrobel, A.G, Benton, D.J, Rosenthal, P.B, Gamblin, S.J.
登録日2020-06-18
公開日2020-07-01
最終更新日2021-03-17
実験手法ELECTRON MICROSCOPY (6.8 Å)
主引用文献SARS-CoV-2 and bat RaTG13 spike glycoprotein structures inform on virus evolution and furin-cleavage effects.
Nat.Struct.Mol.Biol., 27, 2020
6ZGE
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Uncleavable Spike Protein of SARS-CoV-2 in Closed Conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Wrobel, A.G, Benton, D.J, Rosenthal, P.B, Gamblin, S.J.
登録日2020-06-18
公開日2020-07-01
最終更新日2020-09-16
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献SARS-CoV-2 and bat RaTG13 spike glycoprotein structures inform on virus evolution and furin-cleavage effects.
Nat.Struct.Mol.Biol., 27, 2020
6ZGG
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Furin Cleaved Spike Protein of SARS-CoV-2 with One RBD Erect
分子名称: Spike glycoprotein
著者Wrobel, A.G, Benton, D.J, Rosenthal, P.B, Gamblin, S.J.
登録日2020-06-18
公開日2020-07-01
最終更新日2020-09-16
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献SARS-CoV-2 and bat RaTG13 spike glycoprotein structures inform on virus evolution and furin-cleavage effects.
Nat.Struct.Mol.Biol., 27, 2020
6ZLH
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the structure of glutamate transporter homologue GltTk in complex with the photo switchable compound (trans)
分子名称: (2~{S},3~{S})-2-azanyl-3-[[4-[2-(4-methoxyphenyl)hydrazinyl]phenyl]methoxy]butanedioic acid, DECYL-BETA-D-MALTOPYRANOSIDE, DI(HYDROXYETHYL)ETHER, ...
著者Arkhipova, V, Slotboom, D.J, Guskov, A.
登録日2020-06-30
公開日2021-01-27
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Aspects of Photopharmacology: Insight into the Binding of Photoswitchable and Photocaged Inhibitors to the Glutamate Transporter Homologue.
J.Am.Chem.Soc., 143, 2021
5FJW
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Yeast delta-COP-I mu-homology domain complexed with Dsl1 WxWx(MSE) peptide
分子名称: COATOMER SUBUNIT DELTA, PROTEIN TRANSPORT PROTEIN DSL1
著者Suckling, R.J, Evans, P.R, Owen, D.J.
登録日2015-10-13
公開日2015-11-11
最終更新日2016-04-06
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Basis for the Binding of Tryptophan-Based Motifs by Delta-Cop.
Proc.Natl.Acad.Sci.USA, 112, 2015
6ZG3
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the structure of ECF PanT transporter in a complex with a nanobody
分子名称: CA14381 nanobody, CITRIC ACID, Conserved hypothetical membrane protein, ...
著者Setyawati, I, Guskov, A, Slotboom, D.J.
登録日2020-06-18
公開日2021-03-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献In vitro reconstitution of dynamically interacting integral membrane subunits of energy-coupling factor transporters.
Elife, 9, 2020
5FR0
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The details of glycolipid glycan hydrolysis by the structural analysis of a family 123 glycoside hydrolase from Clostridium perfringens
分子名称: 2-deoxy-2-[(difluoroacetyl)amino]-beta-D-galactopyranose, BETA-N-ACETYLGALACTOSAMINIDASE, PHOSPHATE ION
著者Noach, I, Pluvinage, B, Laurie, C, Abe, K.T, Alteen, M, Vocadlo, D.J, Boraston, A.B.
登録日2015-12-14
公開日2016-03-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The Details of Glycolipid Glycan Hydrolysis by the Structural Analysis of a Family 123 Glycoside Hydrolase from Clostridium Perfringens
J.Mol.Biol., 428, 2016
5FQG
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The details of glycolipid glycan hydrolysis by the structural analysis of a family 123 glycoside hydrolase from Clostridium perfringens
分子名称: 2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-beta-D-galactopyranose, BETA-N-ACETYLGALACTOSAMINIDASE, FORMIC ACID
著者Noach, I, Pluvinage, B, Laurie, C, Abe, K.T, Alteen, M, Vocadlo, D.J, Boraston, A.B.
登録日2015-12-10
公開日2016-03-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The Details of Glycolipid Glycan Hydrolysis by the Structural Analysis of a Family 123 Glycoside Hydrolase from Clostridium Perfringens
J.Mol.Biol., 428, 2016
5FPI
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Mu2 adaptin subunit of the AP2 adaptor (C-terminal domain) complexed with Integrin alpha4 internalisation peptide QYKSILQE
分子名称: AP-2 COMPLEX SUBUNIT MU, INTEGRIN ALPHA-4 SUBUNIT
著者Owen, D.J, Evans, P.R, Ivaska, J.
登録日2015-11-30
公開日2016-01-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.77 Å)
主引用文献Selective Integrin Endocytosis is Driven by Alpha Chain:Ap2 Interactions
Nat.Struct.Mol.Biol., 23, 2016
6XDM
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STRUCTURE OF HUMAN HDAC2 IN COMPLEX WITH AN ARYL KETONE INHIBITOR
分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, Histone deacetylase 2, ...
著者Klein, D.J, Liu, J.
登録日2020-06-11
公開日2020-07-29
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Selective Class I HDAC Inhibitors Based on Aryl Ketone Zinc Binding Induce HIV-1 Protein for Clearance.
Acs Med.Chem.Lett., 11, 2020
5FKY
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Structure of a hydrolase bound with an inhibitor
分子名称: (3aR,5R,6S,7R,7aR)-2-amino-5-(hydroxymethyl)-5,6,7,7a-tetrahydro-3aH-pyrano[3,2-d][1,3]thiazole-6,7-diol, GLYCEROL, O-GLCNACASE BT_4395
著者Cekic, N, Heinonen, J.E, Stubbs, K.A, Roth, C, McEachern, E.J, Davies, G.J, Vocadlo, D.J.
登録日2015-10-20
公開日2016-01-27
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Analysis of transition state mimicry by tight binding aminothiazoline inhibitors provides insight into catalysis by humanO-GlcNAcase.
Chem Sci, 7, 2016
6XWR
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Structure of glutamate transporter homologue GltTk in sodium only condition
分子名称: Proton/glutamate symporter, SDF family
著者Arkhipova, V, Slotboom, D.J, Guskov, A.
登録日2020-01-24
公開日2020-03-04
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.22 Å)
主引用文献Structural ensemble of a glutamate transporter homologue in lipid nanodisc environment.
Nat Commun, 11, 2020
6YL1
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Cdk2(F80C) with Covalent Adduct TK37 at F80C
分子名称: Cyclin-dependent kinase 2, methyl 4-(cyclopropylmethyl)-1-prop-2-enoyl-2,3-dihydroquinoxaline-6-carboxylate
著者Craven, G, Morgan, R.M.L, Mann, D.J.
登録日2020-04-06
公開日2020-07-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Multiparameter Kinetic Analysis for Covalent Fragment Optimization by Using Quantitative Irreversible Tethering (qIT).
Chembiochem, 21, 2020
4ZTF
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Crystal Structure of the Prototype Foamy Virus Intasome with a 2-Pyridinone Aminal Inhibitor
分子名称: (1R,2R,5S)-8'-(3-chloro-4-fluorobenzyl)-6'-hydroxy-2'-[(2S)-2-hydroxypropyl]-9',10'-dihydro-2'H-spiro[bicyclo[3.1.0]hexane-2,3'-imidazo[5,1-a][2,6]naphthyridine]-1',5',7'(8'H)-trione, 17 NUCLEOTIDE PREPROCESSED PFV DONOR DNA (TRANSFERRED STRAND), 19 NUCLEOTIDE PREPROCESSED PFV DONOR DNA (NON-TRANSFERRED STRAND), ...
著者Klein, D.J, Patel, S.
登録日2015-05-14
公開日2015-10-07
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Discovery of 2-Pyridinone Aminals: A Prodrug Strategy to Advance a Second Generation of HIV-1 Integrase Strand Transfer Inhibitors.
J.Med.Chem., 58, 2015
6Y5I
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Dilated form 1 of X-31 Influenza Haemagglutinin at pH 5 (State II)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, X-31 Influenza Haemagglutinin HA1, ...
著者Benton, D.J, Rosenthal, P.B.
登録日2020-02-25
公開日2020-06-10
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (5.5 Å)
主引用文献Structural transitions in influenza haemagglutinin at membrane fusion pH.
Nature, 583, 2020
6XVB
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Crystal structure of the kinase domain of human c-KIT with a cyclic imidate inhibitor covalently bound to Cys788
分子名称: Mast/stem cell growth factor receptor Kit,Mast/stem cell growth factor receptor Kit, ~{N}-(4,4-dimethyl-2-propyl-3,1-benzoxazin-6-yl)-2-[3-methoxy-5-(7-methoxyquinolin-4-yl)oxy-pyridin-2-yl]ethanamide
著者Schimpl, M, McAuley, K, Hoyt, E.A, Thomas, M, Bodnarchuk, M.S, Lewis, H.J, Barratt, D, Deery, M.J, Ogg, D.J, Bernardes, G.J.L, Ward, R.A, Kettle, J.G, Waring, M.J.
登録日2020-01-21
公開日2020-05-27
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Alkynyl Benzoxazines and Dihydroquinazolines as Cysteine Targeting Covalent Warheads and Their Application in Identification of Selective Irreversible Kinase Inhibitors.
J.Am.Chem.Soc., 142, 2020
6XWO
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Structure of glutamate transporter homologue GltTk in the unsaturated conditions - inward-inward-outward configuration
分子名称: ASPARTIC ACID, Proton/glutamate symporter, SDF family
著者Arkhipova, V, Slotboom, D.J, Guskov, A.
登録日2020-01-24
公開日2020-03-04
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.39 Å)
主引用文献Structural ensemble of a glutamate transporter homologue in lipid nanodisc environment.
Nat Commun, 11, 2020
6XWN
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Structure of glutamate transporter homologue GltTk in the presence of TBOA inhibitor
分子名称: (3S)-3-(BENZYLOXY)-L-ASPARTIC ACID, Proton/glutamate symporter, SDF family
著者Arkhipova, V, Slotboom, D.J, Guskov, A.
登録日2020-01-24
公開日2020-03-04
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.47 Å)
主引用文献Structural ensemble of a glutamate transporter homologue in lipid nanodisc environment.
Nat Commun, 11, 2020
5EQL
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Isoform-specific inhibition of SUMO-dependent protein-protein interactions
分子名称: SUMO-Affirmer-S2D5, Small ubiquitin-related modifier 2
著者Hughes, D.J, Tiede, C, Hall, N, Tang, A.A.S, Trinh, C.H, Zajac, K, Mandal, U, Howell, G, Edwards, T.A, McPherson, M.J, Tomlinson, D.C, Whitehouse, A.
登録日2015-11-13
公開日2016-11-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Generation of specific inhibitors of SUMO-1- and SUMO-2/3-mediated protein-protein interactions using Affimer (Adhiron) technology.
Sci Signal, 10, 2017
1NOD
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BU of 1nod by Molmil
MURINE INDUCIBLE NITRIC OXIDE SYNTHASE OXYGENASE DIMER (DELTA 65) WITH TETRAHYDROBIOPTERIN AND SUBSTRATE L-ARGININE
分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, ARGININE, NITRIC OXIDE SYNTHASE, ...
著者Crane, B.R, Arvai, A.S, Getzoff, E.D, Stuehr, D.J, Tainer, J.A.
登録日1998-03-05
公開日1999-03-23
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of nitric oxide synthase oxygenase dimer with pterin and substrate.
Science, 279, 1998
6XWQ
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Structure of glutamate transporter homologue GltTk in the saturated conditions
分子名称: ASPARTIC ACID, Proton/glutamate symporter, SDF family
著者Arkhipova, V, Slotboom, D.J, Guskov, A.
登録日2020-01-24
公開日2020-03-04
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.41 Å)
主引用文献Structural ensemble of a glutamate transporter homologue in lipid nanodisc environment.
Nat Commun, 11, 2020
6XVJ
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Crystal structure of the KDR (VEGFR2) kinase domain in complex with a type-II inhibitor
分子名称: Vascular endothelial growth factor receptor 2, ~{N}-[3-[(dimethylamino)methyl]-5-methyl-phenyl]-2-[3-methoxy-5-(7-methoxyquinolin-4-yl)oxy-pyridin-2-yl]ethanamide
著者Schimpl, M, McAuley, K, Hoyt, E.A, Thomas, M, Bodnarchuk, M.S, Lewis, H.J, Barratt, D, Deery, M.J, Ogg, D.J, Bernardes, G.J.L, Ward, R.A, Kettle, J.G, Waring, M.J.
登録日2020-01-22
公開日2020-05-27
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Alkynyl Benzoxazines and Dihydroquinazolines as Cysteine Targeting Covalent Warheads and Their Application in Identification of Selective Irreversible Kinase Inhibitors.
J.Am.Chem.Soc., 142, 2020
6XWP
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BU of 6xwp by Molmil
Structure of glutamate transporter homologue GltTk in unsaturated conditions - outward-outward-inward configuration
分子名称: ASPARTIC ACID, Proton/glutamate symporter, SDF family
著者Arkhipova, V, Slotboom, D.J, Guskov, A.
登録日2020-01-24
公開日2020-03-04
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.38 Å)
主引用文献Structural ensemble of a glutamate transporter homologue in lipid nanodisc environment.
Nat Commun, 11, 2020
135D
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BU of 135d by Molmil
SOLUTION STRUCTURE OF A PURINE(DOT)PURINE(DOT)PYRIMIDINE DNA TRIPLEX CONTAINING G(DOT)GC AND T(DOT)AT TRIPLES
分子名称: DNA TRIPLEX
著者Radhakrishnan, I, Patel, D.J.
登録日1993-08-30
公開日1994-04-30
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of a purine.purine.pyrimidine DNA triplex containing G.GC and T.AT triples.
Structure, 1, 1993

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