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PDB: 2998 件

2OE8
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1.8 A X-ray crystal structure of Apramycin complex with RNA fragment GGGCGUCGCUAGUACC/CGGUACUAAAAGUCGCC containing the human ribosomal decoding A site: RNA construct with 5'-overhang
分子名称: APRAMYCIN, RNA (5'-R(*CP*GP*GP*UP*AP*CP*UP*AP*AP*AP*AP*GP*UP*CP*GP*CP*C)-3'), RNA (5'-R(*GP*GP*GP*CP*GP*UP*CP*GP*CP*UP*AP*GP*UP*AP*CP*C)-3')
著者Hermann, T, Tereshko, V, Skripkin, E, Patel, D.J.
登録日2006-12-28
公開日2007-02-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Apramycin recognition by the human ribosomal decoding site.
Blood Cells Mol.Dis., 38, 2007
2ERJ
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Crystal structure of the heterotrimeric interleukin-2 receptor in complex with interleukin-2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Debler, E.W, Stauber, D.J, Wilson, I.A.
登録日2005-10-25
公開日2006-02-21
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of the IL-2 signaling complex: Paradigm for a heterotrimeric cytokine receptor.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2NUI
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X-ray Structure of synthetic [D83A]RNase A
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, Ribonuclease pancreatic
著者Boerema, D.J, Tereshko, V.A, Kent, S.B.H.
登録日2006-11-09
公開日2007-10-30
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Total synthesis by modern chemical ligation methods and high resolution (1.1 A) X-ray structure of ribonuclease A
Biopolymers, 90, 2008
2QY7
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Crystal structure of human epsinR ENTH domain
分子名称: Clathrin interactor 1
著者Miller, S.E, Collins, B.M, McCoy, A.J, Robinson, M.S, Owen, D.J.
登録日2007-08-13
公開日2007-11-27
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A SNARE-adaptor interaction is a new mode of cargo recognition in clathrin-coated vesicles.
Nature, 450, 2007
2TOB
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SOLUTION STRUCTURE OF THE TOBRAMYCIN-RNA APTAMER COMPLEX, NMR, 13 STRUCTURES
分子名称: 1,3-DIAMINO-4,5,6-TRIHYDROXY-CYCLOHEXANE, 2,6-diammonio-2,3,6-trideoxy-alpha-D-glucopyranose, 3-ammonio-3-deoxy-alpha-D-glucopyranose, ...
著者Jiang, L, Patel, D.J.
登録日1998-06-17
公開日1999-06-22
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of the tobramycin-RNA aptamer complex.
Nat.Struct.Biol., 5, 1998
2EVD
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Crystal structure of human Glycolipid Transfer Protein complexed with 12:0 Lactosylceramide
分子名称: DECANE, Glycolipid transfer protein, LAURIC ACID, ...
著者Malinina, L, Malakhova, M.L, Kanack, A.T, Abagyan, R, Brown, R.E, Patel, D.J.
登録日2005-10-31
公開日2006-11-14
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The liganding of glycolipid transfer protein is controlled by glycolipid acyl structure.
Plos Biol., 4, 2006
2EVL
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Crystal structure of human Glycolipid Transfer Protein complexed with 18:2 Galactosylceramide
分子名称: Glycolipid transfer protein, LINOLEIC ACID, N-OCTANE, ...
著者Malinina, L, Malakhova, M.L, Kanack, A.T, Abagyan, R, Brown, R.E, Patel, D.J.
登録日2005-10-31
公開日2006-11-14
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The liganding of glycolipid transfer protein is controlled by glycolipid acyl structure.
Plos Biol., 4, 2006
2CFI
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The hydrolase domain of human 10-FTHFD in complex with 6- formyltetrahydropterin
分子名称: 10-FORMYLTETRAHYDROFOLATE DEHYDROGENASE, 6-FORMYLTETRAHYDROPTERIN, SULFATE ION
著者Kursula, P, Stenmark, P, Arrowsmith, C, Edwards, A, Ehn, M, Graslund, S, Hammarstrom, M, Hallberg, M, Kotenyova, T, Nilsson-Ehle, P, Nordlund, P, Ogg, D.J, Persson, C, Sagemark, J, Schuler, H, Sundstrom, M, Thorsell, A, Weigelt, J.
登録日2006-02-21
公開日2006-03-14
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structures of the Hydrolase Domain of Human 10-Formyltetrahydrofolate Dehydrogenase and its Complex with a Substrate Analogue.
Acta Crystallogr.,Sect.D, 62, 2006
3Q0D
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Crystal structure of SUVH5 SRA- hemi methylated CG DNA complex
分子名称: CHLORIDE ION, DNA (5'-D(*CP*TP*GP*AP*CP*GP*TP*GP*GP*A)-3'), DNA (5'-D(*TP*CP*CP*AP*(5CM)P*GP*TP*CP*AP*G)-3'), ...
著者Eerappa, R, Simanshu, D.K, Patel, D.J.
登録日2010-12-15
公開日2011-02-23
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.3704 Å)
主引用文献A dual flip-out mechanism for 5mC recognition by the Arabidopsis SUVH5 SRA domain and its impact on DNA methylation and H3K9 dimethylation in vivo.
Genes Dev., 25, 2011
2CB6
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Crystal structure of the catalytic domain of the mosquitocidal toxin from Bacillus sphaericus, mutant E195Q
分子名称: MOSQUITOCIDAL TOXIN
著者Reinert, D.J, Carpusca, I, Aktories, K, Schulz, G.E.
登録日2005-12-29
公開日2006-02-22
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure of the Mosquitocidal Toxin from Bacillus Sphaericus.
J.Mol.Biol., 357, 2006
3PTA
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Crystal structure of human DNMT1(646-1600) in complex with DNA
分子名称: DNA (5'-D(*CP*CP*TP*GP*CP*GP*GP*AP*GP*GP*CP*TP*CP*AP*CP*GP*GP*GP*A)-3'), DNA (5'-D(*TP*CP*CP*CP*GP*TP*GP*AP*GP*CP*CP*TP*CP*CP*GP*CP*AP*GP*G)-3'), DNA (cytosine-5)-methyltransferase 1, ...
著者Song, J, Patel, D.J.
登録日2010-12-02
公開日2010-12-29
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Structure of DNMT1-DNA complex reveals a role for autoinhibition in maintenance DNA methylation.
Science, 331, 2011
2CHO
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Bacteroides thetaiotaomicron hexosaminidase with O-GlcNAcase activity
分子名称: ACETATE ION, CALCIUM ION, GLUCOSAMINIDASE, ...
著者Dennis, R.J, Taylor, E.J, Macauley, M.S, Stubbs, K.A, Turkenburg, J.P, Hart, S.J, Black, G.N, Vocadlo, D.J, Davies, G.J.
登録日2006-03-16
公開日2006-06-19
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure and Mechanism of a Bacterial B-Glucosaminidase Having O-Glcnacase Activity
Nat.Struct.Mol.Biol., 13, 2006
2CO0
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WDR5 and unmodified Histone H3 complex at 2.25 Angstrom
分子名称: HISTONE H3 DIMETHYL-LYSINE 4, WD-REPEAT PROTEIN 5
著者Ruthenburg, A.J, Wang, W, Graybosch, D.M, Li, H, Allis, C.D, Patel, D.J, Verdine, G.L.
登録日2006-05-25
公開日2006-07-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Histone H3 Recognition and Presentation by the Wdr5 Module of the Mll1 Complex
Nat.Struct.Mol.Biol., 13, 2006
2CNX
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WDR5 and Histone H3 Lysine 4 dimethyl complex at 2.1 angstrom
分子名称: HISTONE H3 DIMETHYL-LYSINE 4, WD-REPEAT PROTEIN 5
著者Ruthenburg, A.J, Wang, W, Graybosch, D.M, Li, H, Allis, C.D, Patel, D.J, Verdine, G.L.
登録日2006-05-25
公開日2006-07-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Histone H3 Recognition and Presentation by the Wdr5 Module of the Mll1 Complex
Nat.Struct.Mol.Biol., 13, 2006
2FQA
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Violacin A
分子名称: violacin 1
著者Ireland, D.C, Craik, D.J, Daly, N.L.
登録日2006-01-17
公開日2006-01-31
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Discovery and Characterization of a Linear Cyclotide from Viola odorata: Implications for the Processing of Circular Proteins
J.Mol.Biol., 357, 2006
2FSA
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Crystal structure of PHD finger-linker-bromodomain fragment of human BPTF in the H3(1-15)K4ME2 bound state
分子名称: Histone H3(1-15)K4me2 peptide, ZINC ION, bromodomain PHD finger transcription factor
著者Li, H, Patel, D.J.
登録日2006-01-21
公開日2006-07-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Molecular basis for site-specific read-out of histone H3K4me3 by the BPTF PHD finger of NURF.
Nature, 442, 2006
2PLF
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The structure of aIF2gamma subunit from the archaeon Sulfolobus solfataricus in the nucleotide-free form.
分子名称: Translation initiation factor 2 gamma subunit
著者Nikonov, O.S, Stolboushkina, E.A, Nikulin, A.D, Hasenohrl, D, Blaesi, U, Manstein, D.J, Fedorov, R.V, Garber, M.B, Nikonov, S.V.
登録日2007-04-19
公開日2007-11-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献New Insights into the Interactions of the Translation Initiation Factor 2 from Archaea with Guanine Nucleotides and Initiator tRNA.
J.Mol.Biol., 373, 2007
2PO8
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The structure of a two-disulfide intermediate of MCoTI-II
分子名称: MCoTI-II
著者Cemazar, M, Joshi, A, Mark, A.E, Craik, D.J, Daly, N.L.
登録日2007-04-26
公開日2008-05-06
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献The structure of a two-disulfide intermediate of MCoTI-II
To be Published
3NJY
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Crystal structure of JMJD2A complexed with 5-carboxy-8-hydroxyquinoline
分子名称: 8-hydroxyquinoline-5-carboxylic acid, Lysine-specific demethylase 4A, NICKEL (II) ION, ...
著者King, O.N.F, Clifton, I.J, Wang, M, Maloney, D.J, Jadhav, A, Oppermann, U, Heightman, T.D, Simeonov, A, McDonough, M.A, Schofield, C.J.
登録日2010-06-18
公開日2010-12-08
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Quantitative high-throughput screening identifies 8-hydroxyquinolines as cell-active histone demethylase inhibitors
Plos One, 5, 2010
3NMR
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Crystal Structure of CUGBP1 RRM1/2-RNA Complex
分子名称: CUGBP Elav-like family member 1, RNA (5'-R(*GP*UP*UP*GP*UP*UP*UP*UP*GP*UP*UP*U)-3')
著者Teplova, M, Song, J, Gaw, H, Teplov, A, Patel, D.J.
登録日2010-06-22
公開日2010-10-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural Insights into RNA Recognition by the Alternate-Splicing Regulator CUG-Binding Protein 1.
Structure, 18, 2010
3NIQ
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Crystal structure of Pseudomonas aeruginosa guanidinopropionase
分子名称: 3-guanidinopropionase, GLYCEROL, MANGANESE (II) ION
著者Lee, S.J, Kim, H.S, Kim, D.J, Yoon, H.J, Kim, K.H, Yoon, J.Y, Jang, J.Y, Im, H, An, D, Suh, S.W.
登録日2010-06-16
公開日2011-06-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Crystal structures of Pseudomonas aeruginosa guanidinobutyrase and guanidinopropionase, members of the ureohydrolase superfamily
J.Struct.Biol., 175, 2011
2F6J
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Crystal structure of PHD finger-linker-bromodomain fragment of human BPTF in the H3(1-15)K4me3 bound state
分子名称: ZINC ION, bromodomain PHD finger transcription factor, histone H3, ...
著者Li, H, Patel, D.J.
登録日2005-11-29
公開日2006-07-11
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Molecular basis for site-specific read-out of histone H3K4me3 by the BPTF PHD finger of NURF.
Nature, 442, 2006
2EW4
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Solution structure of MrIA
分子名称: MrIA
著者Nilsson, K.P, Lovelace, E.S, Caesar, C.E, Tynngard, N, Alewood, P.F, Johansson, H.M, Sharpe, I.A, Lewis, R.J, Daly, N.L, Craik, D.J.
登録日2005-11-02
公開日2005-11-15
最終更新日2020-06-24
実験手法SOLUTION NMR
主引用文献Solution structure of chi-conopeptide MrIA, a modulator of the human norepinephrine transporter
Biopolymers, 80, 2005
3OX0
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Crystal structure of glycine riboswitch, unbound state
分子名称: Domain II of glycine riboswitch, MAGNESIUM ION
著者Huang, L, Serganov, A, Patel, D.J.
登録日2010-09-20
公開日2010-12-29
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.049 Å)
主引用文献Structural insights into ligand recognition by a sensing domain of the cooperative glycine riboswitch.
Mol.Cell, 40, 2010
2QYW
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Crystal structure of mouse vti1b Habc domain
分子名称: Vesicle transport through interaction with t-SNAREs 1B homolog
著者Miller, S.E, Collins, B.M, McCoy, A.J, Robinson, M.S, Owen, D.J.
登録日2007-08-15
公開日2007-11-27
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A SNARE-adaptor interaction is a new mode of cargo recognition in clathrin-coated vesicles.
Nature, 450, 2007

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