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PDB: 1224 results

1DP0
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BU of 1dp0 by Molmil
E. COLI BETA-GALACTOSIDASE AT 1.7 ANGSTROM
Descriptor: BETA-GALACTOSIDASE, DIMETHYL SULFOXIDE, MAGNESIUM ION, ...
Authors:Juers, D.H, Jacobson, R.H, Wigley, D, Zhang, X.J, Huber, R.E, Tronrud, D.E, Matthews, B.W.
Deposit date:1999-12-22
Release date:2001-02-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:High resolution refinement of beta-galactosidase in a new crystal form reveals multiple metal-binding sites and provides a structural basis for alpha-complementation.
Protein Sci., 9, 2000
1DC8
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BU of 1dc8 by Molmil
STRUCTURE OF A TRANSIENTLY PHOSPHORYLATED "SWITCH" IN BACTERIAL SIGNAL TRANSDUCTION
Descriptor: NITROGEN REGULATION PROTEIN
Authors:Kern, D, Volkman, B.F, Luginbuhl, P, Nohaile, M.J, Kustu, S, Wemmer, D.E.
Deposit date:1999-11-04
Release date:2000-01-05
Last modified:2022-12-21
Method:SOLUTION NMR
Cite:Structure of a transiently phosphorylated switch in bacterial signal transduction.
Nature, 402, 1999
6XUJ
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HumRadA1 in complex with 5-Ethyl-N-(1H-indol-5-ylmethyl)-1,3,4-thiadiazol-2-amine in P21212
Descriptor: 5-Ethyl-N-(1H-indol-5-ylmethyl)-1,3,4-thiadiazol-2-amine, DNA repair and recombination protein RadA, PHOSPHATE ION
Authors:Marsh, M.E, Scott, D.E, Hyvonen, M.
Deposit date:2020-01-20
Release date:2021-03-03
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Optimising crystallographic systems for structure-guided drug discovery
To be published
8U47
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BU of 8u47 by Molmil
Crystal structure of Bacteroides thetaiotaomicron VPI-5482 Endoglycosidase BT1285
Descriptor: Endo-beta-N-acetylglucosaminidase, MAGNESIUM ION, PHOSPHATE ION
Authors:Sastre, D.E, Sultana, N, Sundberg, E.J.
Deposit date:2023-09-09
Release date:2024-05-29
Last modified:2024-06-26
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Human gut microbes express functionally distinct endoglycosidases to metabolize the same N-glycan substrate.
Nat Commun, 15, 2024
8U46
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BU of 8u46 by Molmil
Crystal structure of Bacteroides thetaiotaomicron VPI-5482 Endoglycosidase BT1285 D161A-E163A inactive version
Descriptor: Endo-beta-N-acetylglucosaminidase
Authors:Sastre, D.E, Sultana, N, Sundberg, E.J.
Deposit date:2023-09-09
Release date:2024-05-29
Last modified:2024-06-26
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Human gut microbes express functionally distinct endoglycosidases to metabolize the same N-glycan substrate.
Nat Commun, 15, 2024
8U48
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Crystal structure of Bacteroides thetaiotamicron BT1285 D161A-E163A inactive Endoglycosidase in complex with high-mannose N-glycan (Man9GlcNAc2) substrate
Descriptor: Endo-beta-N-acetylglucosaminidase, PHOSPHATE ION, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Sastre, D.E, Sultana, N, Navarro, M.V.A.S, Sundberg, E.J.
Deposit date:2023-09-09
Release date:2024-05-29
Last modified:2024-06-26
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Human gut microbes express functionally distinct endoglycosidases to metabolize the same N-glycan substrate.
Nat Commun, 15, 2024
8U9F
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Crystal structure of Bacteroides thetaiotamicron BT1285 in complex with NaI
Descriptor: 1,2-ETHANEDIOL, Endo-beta-N-acetylglucosaminidase, IODIDE ION, ...
Authors:Sastre, D.E, Navarro, M.V.A.S, Sundberg, E.J.
Deposit date:2023-09-19
Release date:2024-05-29
Last modified:2024-06-26
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Human gut microbes express functionally distinct endoglycosidases to metabolize the same N-glycan substrate.
Nat Commun, 15, 2024
6XL4
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BU of 6xl4 by Molmil
EGFR(T790M/V948R) in complex with AZD9291 and DDC4002
Descriptor: 10-benzyl-8-fluoro-5,10-dihydro-11H-dibenzo[b,e][1,4]diazepin-11-one, Epidermal growth factor receptor, MAGNESIUM ION, ...
Authors:Heppner, D.E, Beyett, T.S, Eck, M.J.
Deposit date:2020-06-28
Release date:2021-06-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Molecular basis for cooperative binding and synergy of ATP-site and allosteric EGFR inhibitors.
Nat Commun, 13, 2022
8TO3
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BU of 8to3 by Molmil
EGFR(T790M/V948R) in complex with LN5461
Descriptor: 3-hydroxy-N-{(3P)-3-[(4P)-2-(methylsulfanyl)-5-{2-[4-(piperazin-1-yl)anilino]pyridin-4-yl}-1H-imidazol-4-yl]phenyl}-2-[(1-oxo-1,3-dihydro-2H-isoindol-2-yl)methyl]benzamide, Epidermal growth factor receptor, MAGNESIUM ION, ...
Authors:Chitnis, S.C, Pham, C.D, Heppner, D.E.
Deposit date:2023-08-02
Release date:2024-08-28
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:EGFR(T790M/V948R) in complex with LN5461
To Be Published
8TO4
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EGFR(T790M/V948R) in complex with the allosteric inhibitor FRF-06-057
Descriptor: (2R)-2-(1,3-dioxo-1,3-dihydro-2H-isoindol-2-yl)-2-phenyl-N-(1,3-thiazol-2-yl)acetamide, Epidermal growth factor receptor, MAGNESIUM ION, ...
Authors:Chitnis, S.P, Deng, M.Q, Pham, C.P, Heppner, D.E.
Deposit date:2023-08-02
Release date:2024-08-28
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:EGFR(T790M/V948R) in complex with the allosteric inhibitor FRF-06-057
To Be Published
1ECI
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BU of 1eci by Molmil
ECTATOMIN (WATER SOLUTION, NMR 20 STRUCTURES)
Descriptor: ECTATOMIN
Authors:Nolde, D.E, Sobol, A.G, Pluzhnikov, K.A, Arseniev, A.S, Grishin, E.V.
Deposit date:1995-08-16
Release date:1995-12-07
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Three-dimensional structure of ectatomin from Ectatomma tuberculatum ant venom.
J.Biomol.NMR, 5, 1995
6YES
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BU of 6yes by Molmil
Crystal structure of type I-D CRISPR-Cas nuclease Cas10d
Descriptor: CRISPR-associated protein, CscA, ZINC ION
Authors:Brodersen, D.E, Van, L.B, Manav, M.C.
Deposit date:2020-03-25
Release date:2020-10-28
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (4.1 Å)
Cite:Structural basis for inhibition of an archaeal CRISPR-Cas type I-D large subunit by an anti-CRISPR protein.
Nat Commun, 11, 2020
8UCX
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BU of 8ucx by Molmil
Dihydrofolate Reductase Complexed with Folate
Descriptor: Dihydrofolate reductase, FOLIC ACID, MANGANESE (II) ION
Authors:Fried, S.D.E, Boxer, S.G.
Deposit date:2023-09-27
Release date:2023-10-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Role of Electrostatics in Hydride Transfer by Dihydrofolate Reductase
To Be Published
8UWV
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BU of 8uwv by Molmil
Crystal structure of BT3984 SusD-like from Bacteroides thetaiotaomicron VPI-5482 at 1.1 A resolution (Space group P21)
Descriptor: BT3984 SusD-like, MAGNESIUM ION
Authors:Sastre, D.E, Navarro, M.V.A.S, Sundberg, E.J.
Deposit date:2023-11-08
Release date:2023-11-22
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Crystal structure of BT3984 SusD-like from Bacteroides thetaiotaomicron VPI-5482 at 1.1 A resolution (Space group P21)
To Be Published
1E74
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BU of 1e74 by Molmil
NMR SOLUTION STRUCTURE OF ALPHA-CONOTOXIN IM1 POINT MUTATION VARIANT R11E
Descriptor: ALPHA-CONOTOXIN IM1(R11E)
Authors:Rogers, J.P, Luginbuhl, P, Pemberton, K, Harty, P, Wemmer, D.E, Stevens, R.C.
Deposit date:2000-08-24
Release date:2000-12-27
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure-Activity Relationships in a Peptidic Alpha7 Nicotinic Acetylcholine Receptor Antagonist
J.Mol.Biol., 304, 2000
1E76
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BU of 1e76 by Molmil
NMR SOLUTION STRUCTURE OF ALPHA-CONOTOXIN IM1 POINT MUTATION VARIANT D5N
Descriptor: ALPHA-CONOTOXIN IM1(D5N)
Authors:Rogers, J.P, Luginbuhl, P, Pemberton, K, Harty, P, Wemmer, D.E, Stevens, R.C.
Deposit date:2000-08-24
Release date:2000-12-27
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure-Activity Relationships in a Peptidic Alpha7 Nicotinic Acetylcholine Receptor Antagonist
J.Mol.Biol., 304, 2000
1E75
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BU of 1e75 by Molmil
NMR SOLUTION STRUCTURE OF ALPHA-CONOTOXIN IM1 POINT MUTATION VARIANT R7L
Descriptor: ALPHA-CONOTOXIN IM1(R7L)
Authors:Rogers, J.P, Luginbuhl, P, Pemberton, K, Harty, P, Wemmer, D.E, Stevens, R.C.
Deposit date:2000-08-24
Release date:2000-12-27
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure-Activity Relationships in a Peptidic Alpha7 Nicotinic Acetylcholine Receptor Antagonist
J.Mol.Biol., 304, 2000
1FQW
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BU of 1fqw by Molmil
CRYSTAL STRUCTURE OF ACTIVATED CHEY
Descriptor: BERYLLIUM TRIFLUORIDE ION, CHEMOTAXIS CHEY PROTEIN, MANGANESE (II) ION
Authors:Lee, S.Y, Cho, H.S, Pelton, J.G, Yan, D, Berry, E.A, Wemmer, D.E.
Deposit date:2000-09-07
Release date:2001-07-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Crystal structure of activated CheY. Comparison with other activated receiver domains.
J.Biol.Chem., 276, 2001
1FJG
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BU of 1fjg by Molmil
STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTICS STREPTOMYCIN, SPECTINOMYCIN, AND PAROMOMYCIN
Descriptor: 16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ...
Authors:Carter, A.P, Clemons Jr, W.M, Brodersen, D.E, Wimberly, B.T, Morgan-Warren, R.J, Ramakrishnan, V.
Deposit date:2000-08-08
Release date:2000-09-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics
Nature, 407, 2000
6XTW
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BU of 6xtw by Molmil
HumRadA33F in complex with peptidic inhibitor 6
Descriptor: DNA repair and recombination protein RadA, SULFATE ION, ~{N}-[2-[(2~{S})-2-[[(1~{S})-1-(4-methoxyphenyl)ethyl]carbamoyl]pyrrolidin-1-yl]-2-oxidanylidene-ethyl]quinoline-2-carboxamide
Authors:Fischer, G, Marsh, M.E, Scott, D.E, Coyne, A.G, Skidmore, J, Abell, C, Hyvonen, M.
Deposit date:2020-01-16
Release date:2021-01-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:A small-molecule inhibitor of the BRCA2-RAD51 interaction modulates RAD51 assembly and potentiates DNA damage-induced cell death.
Cell Chem Biol, 28, 2021
6XUF
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BU of 6xuf by Molmil
HumRadA1 in complex with 5-Ethyl-N-(1H-indol-5-ylmethyl)-1,3,4-thiadiazol-2-amine in P21
Descriptor: 5-Ethyl-N-(1H-indol-5-ylmethyl)-1,3,4-thiadiazol-2-amine, DNA repair and recombination protein RadA, PHOSPHATE ION
Authors:Marsh, M.E, Scott, D.E, Hyvonen, M.E.
Deposit date:2020-01-19
Release date:2021-01-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.241 Å)
Cite:Optimising crystallographic systems for structure-guided drug discovery
To be published
6XJK
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BU of 6xjk by Molmil
JAK2 JH2 in complex with JAK067
Descriptor: 4-({4-amino-6-[(1H-indol-5-yl)oxy]-1,3,5-triazin-2-yl}amino)benzene-1-sulfonamide, Tyrosine-protein kinase JAK2
Authors:Puleo, D.E, Krimmer, S.G, Newton, A.S, Schlessinger, J, Jorgensen, W.L.
Deposit date:2020-06-24
Release date:2020-11-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.023508 Å)
Cite:Explicit Representation of Cation-pi Interactions in Force Fields with 1/r4 Nonbonded Terms.
J Chem Theory Comput, 16, 2020
6ZI0
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BU of 6zi0 by Molmil
Crystal structure of the isolated H. influenzae VapD toxin (wildtype)
Descriptor: Endoribonuclease VapD
Authors:Bertelsen, M.B, Senissar, M, Nielsen, M.H, Bisiak, F, Cunha, M.V, Molinaro, A.L, Daines, D.A, Brodersen, D.E.
Deposit date:2020-06-24
Release date:2020-10-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Basis for Toxin Inhibition in the VapXD Toxin-Antitoxin System.
Structure, 29, 2021
1GIA
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BU of 1gia by Molmil
STRUCTURE OF ACTIVE CONFORMATIONS OF GIA1 AND THE MECHANISM OF GTP HYDROLYSIS
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, G PROTEIN GI ALPHA 1, MAGNESIUM ION
Authors:Berghuis, A.M, Coleman, D.E, Sprang, S.R.
Deposit date:1994-07-20
Release date:1994-09-30
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of active conformations of Gi alpha 1 and the mechanism of GTP hydrolysis.
Science, 265, 1994
6ZI1
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BU of 6zi1 by Molmil
Crystal structure of the isolated H. influenzae VapD toxin (D7N mutant)
Descriptor: Endoribonuclease VapD
Authors:Bertelsen, M.B, Senissar, M, Nielsen, M.H, Bisiak, F, Cunha, M.V, Molinaro, A.L, Daines, D.A, Brodersen, D.E.
Deposit date:2020-06-24
Release date:2020-10-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Basis for Toxin Inhibition in the VapXD Toxin-Antitoxin System.
Structure, 29, 2021

225946

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