Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 22297 results

2QV5
DownloadVisualize
BU of 2qv5 by Molmil
Crystal structure of uncharacterized protein ATU2773 from Agrobacterium tumefaciens C58
Descriptor: GLYCEROL, Uncharacterized protein Atu2773
Authors:Patskovsky, Y, Bonanno, J.B, Sojitra, S, Dickey, M, Bain, K.T, Iizuka, M, Smith, D, Rodgers, L, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-08-07
Release date:2007-08-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Uncharacterized Protein Atu2773 from Agrobacterium Tumefaciens.
To be Published
2QKC
DownloadVisualize
BU of 2qkc by Molmil
Structural and Kinetic Study of the Differences between Human and E.coli Manganese Superoxide Dismutases
Descriptor: MANGANESE (II) ION, Superoxide dismutase [Mn]
Authors:Zheng, J, Domsic, J.F, Cabelli, D, McKenna, R, Silverman, D.N.
Deposit date:2007-07-10
Release date:2008-07-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and kinetic study of differences between human and Escherichia coli manganese superoxide dismutases.
Biochemistry, 46, 2007
2QM7
DownloadVisualize
BU of 2qm7 by Molmil
MeaB, A Bacterial Homolog of MMAA, Bound to GDP
Descriptor: GTPase/ATPase, GUANOSINE-5'-DIPHOSPHATE, PHOSPHATE ION
Authors:Hubbard, P.A, Padovani, D, Labunska, T, Mahlstedt, S.A, Banerjee, R, Drennan, C.L.
Deposit date:2007-07-14
Release date:2007-08-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure and mutagenesis of the metallochaperone MeaB: insight into the causes of methylmalonic aciduria.
J.Biol.Chem., 282, 2007
1DZ8
DownloadVisualize
BU of 1dz8 by Molmil
oxygen complex of p450cam from pseudomonas putida
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CAMPHOR, CYTOCHROME P450-CAM, ...
Authors:Schlichting, I, Berendzen, J, Chu, K, Stock, A.M, Maves, S.A, Benson, D.E, Sweet, R.M, Ringe, D, Petsko, G.A, Sligar, S.G.
Deposit date:2000-02-18
Release date:2000-03-31
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Catalytic Pathway of Cytochrome P450Cam at Atomic Resolution
Science, 287, 2000
1DZ6
DownloadVisualize
BU of 1dz6 by Molmil
ferrous p450cam from pseudomonas putida
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CAMPHOR, CYTOCHROME P450-CAM, ...
Authors:Schlichting, I, Berendzen, J, Chu, K, Stock, A.M, Maves, S.A, Benson, D.E, Sweet, R.M, Ringe, D, Petsko, G.A, Sligar, S.G.
Deposit date:2000-02-18
Release date:2000-03-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Catalytic Pathway of Cytochrome P450Cam at Atomic Resolution
Science, 287, 2000
1DZ9
DownloadVisualize
BU of 1dz9 by Molmil
Putative oxo complex of P450cam from Pseudomonas putida
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CAMPHOR, CYTOCHROME P450-CAM, ...
Authors:Schlichting, I, Berendzen, J, Chu, K, Stock, A.M, Maves, S.A, Benson, D.E, Sweet, R.M, Ringe, D, Petsko, G.A, Sligar, S.G.
Deposit date:2000-02-18
Release date:2000-03-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Catalytic Pathway of Cytochrome P450Cam at Atomic Resolution
Science, 287, 2000
2QZU
DownloadVisualize
BU of 2qzu by Molmil
Crystal structure of the putative sulfatase yidJ from Bacteroides fragilis. Northeast Structural Genomics Consortium target BfR123
Descriptor: Putative sulfatase yidJ
Authors:Vorobiev, S.M, Abashidze, M, Seetharaman, J, Wang, D, Cunningham, K, Maglaqui, M, Owens, L, Xiao, R, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2007-08-17
Release date:2007-09-04
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:X-ray crystal structure of the putative sulfatase yidJ from Bacteroides fragilis.
To be Published
1E44
DownloadVisualize
BU of 1e44 by Molmil
ribonuclease domain of colicin E3 in complex with its immunity protein
Descriptor: 1,2-ETHANEDIOL, COLICIN E3, IMMUNITY PROTEIN
Authors:Carr, S, Walker, D, James, R, Kleanthous, C, Hemmings, A.M.
Deposit date:2000-06-28
Release date:2001-06-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Inhibition of a Ribosome Inactivating Ribonuclease: The Crystal Structure of the Cytotoxic Domain of Colicin E3 in Complex with its Immunity Protein
Structure, 8, 2000
2QVM
DownloadVisualize
BU of 2qvm by Molmil
The second Ca2+-binding domain of the Na+-Ca2+ exchanger is essential for regulation: crystal structures and mutational analysis
Descriptor: CALCIUM ION, Sodium/calcium exchanger 1
Authors:Chaptal, V, Mercado Besserer, G, Abramson, J, Cascio, D.
Deposit date:2007-08-08
Release date:2007-11-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.703 Å)
Cite:The second Ca2+-binding domain of the Na+ Ca2+ exchanger is essential for regulation: crystal structures and mutational analysis
Proc.Natl.Acad.Sci.Usa, 104, 2007
1E6N
DownloadVisualize
BU of 1e6n by Molmil
Chitinase B from Serratia marcescens inactive mutant E144Q in complex with N-acetylglucosamine-pentamer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHITINASE B, GLYCEROL, ...
Authors:Komander, D, Synstad, B, Eijsink, V.G.H, Van Aalten, D.M.F.
Deposit date:2000-08-21
Release date:2001-06-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural Insights Into the Catalytic Mechanism of a Family 18 Exo-Chitinase
Proc.Natl.Acad.Sci.USA, 98, 2001
1E4X
DownloadVisualize
BU of 1e4x by Molmil
crossreactive binding of a circularized peptide to an anti-TGFalpha antibody Fab-fragment
Descriptor: CYCLIC PEPTIDE, TAB2
Authors:Hahn, M, Winkler, D, Misselwitz, R, Wessner, H, Welfle, K, Zahn, G, Schneider-Mergener, J, Hoehne, W.
Deposit date:2000-07-12
Release date:2001-07-12
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Cross-Reactive Binding of Cyclic Peptides to an Anti-Tgf Alpha Antibody Fab Fragment: An X-Ray Structural and Thermodynamic Analysis
J.Mol.Biol., 314, 2001
2QXZ
DownloadVisualize
BU of 2qxz by Molmil
pectate lyase R236F from Xanthomonas campestris
Descriptor: PHOSPHATE ION, pectate lyase II
Authors:Garron, M.L, Shaya, D.
Deposit date:2007-08-13
Release date:2008-03-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Improvement of the thermostability and activity of a pectate lyase by single amino acid substitutions, using a strategy based on melting-temperature-guided sequence alignment.
Appl.Environ.Microbiol., 74, 2008
2QZB
DownloadVisualize
BU of 2qzb by Molmil
Crystal structure of the uncharacterized protein yfeY from Escherichia coli
Descriptor: Uncharacterized protein yfeY
Authors:Bonanno, J.B, Gilmore, M, Bain, K.T, Wu, B, Romero, R, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-08-16
Release date:2007-08-28
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the uncharacterized protein yfeY from Escherichia coli.
To be Published
2R14
DownloadVisualize
BU of 2r14 by Molmil
Structure of morphinone reductase in complex with tetrahydroNAD
Descriptor: 1,4,5,6-TETRAHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, FLAVIN MONONUCLEOTIDE, Morphinone reductase
Authors:Costello, C.L, Scrutton, N.S, Leys, D.
Deposit date:2007-08-22
Release date:2008-07-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Mutagenesis of morphinone reductase induces multiple reactive configurations and identifies potential ambiguity in kinetic analysis of enzyme tunneling mechanisms.
J.Am.Chem.Soc., 129, 2007
2R24
DownloadVisualize
BU of 2r24 by Molmil
Human Aldose Reductase structure
Descriptor: Aldose reductase, IDD594, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Blakeley, M.P, Ruiz, F, Cachau, R, Hazemann, I, Meilleur, F, Mitschler, A, Ginell, S, Afonine, P, Ventura, O.N, Cousido-Siah, A, Haertlein, M, Joachimiak, A, Myles, D, Podjarny, A.
Deposit date:2007-08-24
Release date:2008-12-23
Last modified:2024-02-21
Method:NEUTRON DIFFRACTION (1.752 Å), X-RAY DIFFRACTION
Cite:Quantum model of catalysis based on mobile proton revealed by subatomic X-Ray and neutron diffraction studies of h-Aldose Reductase
Proc.Natl.Acad.Sci.USA, 105, 2008
2SNM
DownloadVisualize
BU of 2snm by Molmil
IN A STAPHYLOCOCCAL NUCLEASE MUTANT THE SIDE-CHAIN of A LYSINE REPLACING VALINE 66 IS FULLY BURIED IN THE HYDROPHOBIC CORE
Descriptor: CALCIUM ION, STAPHYLOCOCCAL NUCLEASE, THYMIDINE-3',5'-DIPHOSPHATE
Authors:Stites, W.E, Gittis, A.G, Lattman, E.E, Shortle, D.
Deposit date:1991-04-03
Release date:1993-01-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:In a staphylococcal nuclease mutant the side-chain of a lysine replacing valine 66 is fully buried in the hydrophobic core.
J.Mol.Biol., 221, 1991
2R69
DownloadVisualize
BU of 2r69 by Molmil
Crystal structure of Fab 1A1D-2 complexed with E-DIII of Dengue virus at 3.8 angstrom resolution
Descriptor: Heavy chain of 1A1D-2, Light chain of 1A1D-2, Major envelope protein E
Authors:Lok, S.M, Kostyuchenko, V.K, Nybakken, G.E, Holdaway, H.A, Battisti, A.J, Sukupolvi-petty, S, Sedlak, D, Fremont, D.H, Chipman, P.R, Roehrig, J.T, Diamond, M.S, Kuhn, R.J, Rossmann, M.G.
Deposit date:2007-09-05
Release date:2007-12-25
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Binding of a neutralizing antibody to dengue virus alters the arrangement of surface glycoproteins.
Nat.Struct.Mol.Biol., 15, 2008
1EUB
DownloadVisualize
BU of 1eub by Molmil
SOLUTION STRUCTURE OF THE CATALYTIC DOMAIN OF HUMAN COLLAGENASE-3 (MMP-13) COMPLEXED TO A POTENT NON-PEPTIDIC SULFONAMIDE INHIBITOR
Descriptor: 1-METHYLOXY-4-SULFONE-BENZENE, 3-METHYLPYRIDINE, CALCIUM ION, ...
Authors:Zhang, X, Gonnella, N.C, Koehn, J, Pathak, N, Ganu, V, Melton, R, Parker, D, Hu, S.I, Nam, K.Y.
Deposit date:2000-04-14
Release date:2001-04-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the catalytic domain of human collagenase-3 (MMP-13) complexed to a potent non-peptidic sulfonamide inhibitor: binding comparison with stromelysin-1 and collagenase-1.
J.Mol.Biol., 301, 2000
2R8U
DownloadVisualize
BU of 2r8u by Molmil
Structure of fragment of human end-binding protein 1 (EB1) containing the N-terminal domain at 1.35 A resolution
Descriptor: MOLYBDATE ION, Microtubule-associated protein RP/EB family member 1
Authors:Huang, X, Lovelace, L.L, Smith, D, Lebioda, L.
Deposit date:2007-09-11
Release date:2008-09-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structure of fragment of human end-binding protein 1 (EB1) containing the N-terminal domain at 1.35 A resolution
To be Published
2R6S
DownloadVisualize
BU of 2r6s by Molmil
Crystal structure of Gab protein
Descriptor: BICINE, FE (II) ION, GLYCEROL, ...
Authors:Lohkamp, B, Dobritzsch, D.
Deposit date:2007-09-06
Release date:2008-06-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A mixture of fortunes: the curious determination of the structure of Escherichia coli BL21 Gab protein.
Acta Crystallogr.,Sect.D, 64, 2008
2R70
DownloadVisualize
BU of 2r70 by Molmil
Crystal structure of infectious bursal disease virus VP1 polymerase, cocrystallized with an oligopeptide mimicking the VP3 C-terminus.
Descriptor: INFECTIOUS BURSAL VIRUS VP1 POLYMERASE
Authors:Garriga, D, Navarro, A, Querol-Audi, J, Abaitua, F, Rodriguez, J.F, Verdaguer, N.
Deposit date:2007-09-07
Release date:2007-11-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Activation mechanism of a noncanonical RNA-dependent RNA polymerase.
Proc.Natl.Acad.Sci.Usa, 104, 2007
1EGH
DownloadVisualize
BU of 1egh by Molmil
STRUCTURE OF METHYLGLYOXAL SYNTHASE COMPLEXED WITH THE COMPETITIVE INHIBITOR 2-PHOSPHOGLYCOLATE
Descriptor: 2-PHOSPHOGLYCOLIC ACID, METHYLGLYOXAL SYNTHASE
Authors:Saadat, D, Harrison, D.H.T.
Deposit date:2000-02-15
Release date:2000-03-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mirroring perfection: the structure of methylglyoxal synthase complexed with the competitive inhibitor 2-phosphoglycolate.
Biochemistry, 39, 2000
2RB5
DownloadVisualize
BU of 2rb5 by Molmil
X-ray Crystallographic Structures Show Conservation of a Trigonal-Bipyramidal Intermediate in a Phosphoryl-transfer Superfamily.
Descriptor: MAGNESIUM ION, Putative uncharacterized protein, trioxido(oxo)tungsten
Authors:Lu, Z, Dunaway-Mariano, D, Allen, K.N.
Deposit date:2007-09-18
Release date:2008-04-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.03 Å)
Cite:The catalytic scaffold of the haloalkanoic acid dehalogenase enzyme superfamily acts as a mold for the trigonal bipyramidal transition state.
Proc.Natl.Acad.Sci.Usa, 105, 2008
1EI1
DownloadVisualize
BU of 1ei1 by Molmil
DIMERIZATION OF E. COLI DNA GYRASE B PROVIDES A STRUCTURAL MECHANISM FOR ACTIVATING THE ATPASE CATALYTIC CENTER
Descriptor: DNA GYRASE B, GLYCEROL, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Brino, L, Urzhumtsev, A, Oudet, P, Moras, D.
Deposit date:2000-02-23
Release date:2000-03-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Dimerization of Escherichia coli DNA-gyrase B provides a structural mechanism for activating the ATPase catalytic center.
J.Biol.Chem., 275, 2000
1EKB
DownloadVisualize
BU of 1ekb by Molmil
THE SERINE PROTEASE DOMAIN OF ENTEROPEPTIDASE BOUND TO INHIBITOR VAL-ASP-ASP-ASP-ASP-LYS-CHLOROMETHANE
Descriptor: ENTEROPEPTIDASE, VAL-ASP-ASP-ASP-ASP-LYK PEPTIDE, ZINC ION
Authors:Fuetterer, K, Lu, D, Sadler, J.E, Waksman, G.
Deposit date:1999-05-02
Release date:1999-10-14
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of enteropeptidase light chain complexed with an analog of the trypsinogen activation peptide.
J.Mol.Biol., 292, 1999

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon