Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 22322 件

4DPL
DownloadVisualize
BU of 4dpl by Molmil
Structure of malonyl-coenzyme A reductase from crenarchaeota in complex with NadP
分子名称: Malonyl-CoA/succinyl-CoA reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, UNKNOWN LIGAND
著者Demmer, U, Warkentin, E, Srivastava, A, Kockelkorn, D, Fuchs, G, Ermler, U.
登録日2012-02-13
公開日2013-01-16
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Basis for a Bispecific NADP+ and CoA Binding Site in an Archaeal Malonyl-Coenzyme A Reductase.
J.Biol.Chem., 288, 2013
4DQK
DownloadVisualize
BU of 4dqk by Molmil
Crystal structure of the FAD binding domain of cytochrome P450 BM3
分子名称: Bifunctional P-450/NADPH-P450 reductase, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, ...
著者Joyce, M.G, Leys, D.
登録日2012-02-16
公開日2012-03-07
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The crystal structure of the FAD/NADPH-binding domain of flavocytochrome P450 BM3.
Febs J., 279, 2012
4IA9
DownloadVisualize
BU of 4ia9 by Molmil
Crystal structure of human WD REPEAT DOMAIN 5 in complex with 2-chloro-4-fluoro-3-methyl-N-[2-(4-methylpiperazin-1-yl)-5-nitrophenyl]benzamide
分子名称: 1,2-ETHANEDIOL, 2-chloro-4-fluoro-3-methyl-N-[2-(4-methylpiperazin-1-yl)-5-nitrophenyl]benzamide, UNKNOWN ATOM OR ION, ...
著者Dong, A, Dombrovski, L, Bolshan, Y, Getlik, M, Tempel, W, Kuznetsova, E, Wasney, G.A, Hajian, T, Poda, G, Nguyen, K.T, Schapira, M, Brown, P.J, Al-awar, R, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Smil, D, Vedadi, M, Wu, H, Structural Genomics Consortium (SGC)
登録日2012-12-06
公開日2012-12-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Synthesis, Optimization, and Evaluation of Novel Small Molecules as Antagonists of WDR5-MLL Interaction.
ACS Med Chem Lett, 4, 2013
4DWR
DownloadVisualize
BU of 4dwr by Molmil
RNA ligase RtcB/Mn2+ complex
分子名称: MANGANESE (II) ION, SULFATE ION, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose, ...
著者Xia, S, Englert, M, Soll, D, Wang, J.
登録日2012-02-26
公開日2012-09-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Structural and mechanistic insights into guanylylation of RNA-splicing ligase RtcB joining RNA between 3'-terminal phosphate and 5'-OH.
Proc.Natl.Acad.Sci.USA, 109, 2012
4I9Q
DownloadVisualize
BU of 4i9q by Molmil
Crystal structure of the ternary complex of the D714A mutant of RB69 DNA polymerase
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, CALCIUM ION, DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*C)-3'), ...
著者Guja, K.E, Jacewicz, A, Trzemecka, A, Plochocka, D, Yakubovskaya, E, Bebenek, A, Garcia-Diaz, M.
登録日2012-12-05
公開日2013-10-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A Remote Palm Domain Residue of RB69 DNA Polymerase Is Critical for Enzyme Activity and Influences the Conformation of the Active Site.
Plos One, 8, 2013
4DTD
DownloadVisualize
BU of 4dtd by Molmil
Structure and functional characterization of a Vibrio cholerae toxin from the MARTX/VgrG family.
分子名称: GLYCEROL, VgrG protein
著者Durand, E, Audoly, G, Derrez, E, Spinelli, S, Ortiz-Lombardia, M, Cascales, E, Raoult, D, Cambillau, C.
登録日2012-02-21
公開日2012-08-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure and functional characterization of a Vibrio cholerae toxin from the MARTX/VgrG family.
J.Biol.Chem., 2012
4DTL
DownloadVisualize
BU of 4dtl by Molmil
Structure of a VgrG Vibrio cholerae toxin ACD domain in complex with ATP and Mn++
分子名称: ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, MANGANESE (II) ION, ...
著者Durand, E, Audoly, G, Derrez, E, Spinelli, S, Ortiz-Lombardia, M, Cascales, E, Raoult, D, Cambillau, C.
登録日2012-02-21
公開日2012-08-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Structure of a VgrG Vibrio cholerae toxin ACD domain in complex with ATP and Mn++
J.Biol.Chem., 2012
4HVZ
DownloadVisualize
BU of 4hvz by Molmil
Crystal structure of brucella abortus immunogenic BP26 protein
分子名称: 26 kDa periplasmic immunogenic protein
著者Kim, D, Park, J, Oh, B, Song, J.
登録日2012-11-07
公開日2013-01-30
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Brucella Immunogenic BP26 Forms a Channel-like Structure.
J.Mol.Biol., 425, 2013
4HV1
DownloadVisualize
BU of 4hv1 by Molmil
Laser-induced microfragmentation of lysozyme crystals allows X-ray nanodiffraction characterization of individual domains (lb4)
分子名称: Lysozyme C
著者Pechkova, E, Belmonte, L, Riekel, C, Popov, D, Koenig, C, Nicolini, C.
登録日2012-11-05
公開日2013-11-20
最終更新日2014-04-16
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Laser-induced microfragmentation of lysozyme crystals allows X-ray nanodiffraction characterization of individual domains
To be Published
4HV2
DownloadVisualize
BU of 4hv2 by Molmil
Laser-induced microfragmentation of lysozyme crystals allows X-ray nanodiffraction characterization of individual domains (lb5)
分子名称: Lysozyme C
著者Pechkova, E, Belmonte, L, Riekel, C, Popov, D, Koenig, C, Nicolini, C.
登録日2012-11-05
公開日2013-11-20
最終更新日2014-04-16
実験手法X-RAY DIFFRACTION (2.501 Å)
主引用文献Laser-induced microfragmentation of lysozyme crystals allows X-ray nanodiffraction characterization of individual domains
To be Published
4DZZ
DownloadVisualize
BU of 4dzz by Molmil
Structure of ParF-ADP, crystal form 1
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Plasmid partitioning protein ParF
著者Schumacher, M.A, Ye, Q, Barge, M.R, Barilla, D, Hayes, F.
登録日2012-03-01
公開日2012-06-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Mechanism of ATP-induced Polymerization of the Partition Factor ParF: IMPLICATIONS FOR DNA SEGREGATION.
J.Biol.Chem., 287, 2012
4E09
DownloadVisualize
BU of 4e09 by Molmil
Structure of ParF-AMPPCP, I422 form
分子名称: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, Plasmid partitioning protein ParF, SULFATE ION
著者Schumacher, M.A, Ye, Q, Barge, M.R, Barilla, D, Hayes, F.
登録日2012-03-02
公開日2012-06-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献Structural Mechanism of ATP-induced Polymerization of the Partition Factor ParF: IMPLICATIONS FOR DNA SEGREGATION.
J.Biol.Chem., 287, 2012
4I09
DownloadVisualize
BU of 4i09 by Molmil
structure of the mutant Catabolite gene activator protein V132L
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator
著者Pohl, E, Townsend, P.D, Rodgers, T, Burnell, D, McLeish, T.C.B, Wilson, M.R, Cann, M.J.
登録日2012-11-16
公開日2013-10-30
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Modulation of global low-frequency motions underlies allosteric regulation: demonstration in CRP/FNR family transcription factors.
Plos Biol., 11, 2013
4E2T
DownloadVisualize
BU of 4e2t by Molmil
Crystal Structures of RadA intein from Pyrococcus horikoshii
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, Pho radA intein
著者Oeemig, J.S, Zhou, D, Kajander, T, Wlodawer, A, Iwai, H.
登録日2012-03-09
公開日2012-05-16
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献NMR and Crystal Structures of the Pyrococcus horikoshii RadA Intein Guide a Strategy for Engineering a Highly Efficient and Promiscuous Intein.
J.Mol.Biol., 421, 2012
4E04
DownloadVisualize
BU of 4e04 by Molmil
RpBphP2 chromophore-binding domain crystallized by homologue-directed mutagenesis.
分子名称: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium-2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid, Bacteriophytochrome (Light-regulated signal transduction histidine kinase), PhyB1
著者Bellini, D, Papiz, M.Z.
登録日2012-03-02
公開日2012-07-25
最終更新日2013-01-23
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Dimerization properties of the RpBphP2 chromophore-binding domain crystallized by homologue-directed mutagenesis.
Acta Crystallogr.,Sect.D, 68, 2012
4I8L
DownloadVisualize
BU of 4i8l by Molmil
Bovine trypsin at 0.87 resolution
分子名称: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
著者Dauter, Z, Liebschner, D, Dauter, M, Brzuszkiewicz, A.
登録日2012-12-03
公開日2012-12-19
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (0.87 Å)
主引用文献On the reproducibility of protein crystal structures: five atomic resolution structures of trypsin.
Acta Crystallogr.,Sect.D, 69, 2013
4I8Z
DownloadVisualize
BU of 4i8z by Molmil
Crystal structure of wild type HIV-1 protease in complex with non-peptidic inhibitor, GRL008
分子名称: (3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl [(2S,3R)-4-{[(4-carbamoylphenyl)sulfonyl](2-methylpropyl)amino}-3-hydroxy-1-phenylbutan-2-yl]carbamate, Protease
著者Yedidi, R.S, Palmer, I, Das, D, Wingfield, P.T, Ghosh, A.K, Mitsuya, H.
登録日2012-12-04
公開日2013-07-24
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献P2' benzene carboxylic acid moiety is associated with decrease in cellular uptake: evaluation of novel non-peptidic HIV-1 protease inhibitors containing P2 bis-tetrahydrofuran moiety.
Antimicrob.Agents Chemother., 57, 2013
4E1F
DownloadVisualize
BU of 4e1f by Molmil
Structure of a VgrG Vibrio cholerae toxin ACD domain Glu16Gln mutant in complex with ADP and Mn++
分子名称: ADENOSINE-5'-DIPHOSPHATE, MANGANESE (II) ION, SULFATE ION, ...
著者Durand, E, Audoly, G, Derrez, E, Spinelli, S, Ortiz-Lombardia, M, Cascales, E, Raoult, D, Cambillau, C.
登録日2012-03-06
公開日2012-10-10
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure and functional characterization of the Vibrio cholerae toxin from the VgrG/MARTX family.
J.Biol.Chem., 2012
4E2I
DownloadVisualize
BU of 4e2i by Molmil
The Complex Structure of the SV40 Helicase Large T Antigen and p68 Subunit of DNA Polymerase Alpha-Primase
分子名称: DNA polymerase alpha subunit B, Large T antigen, ZINC ION
著者Zhou, B, Arnett, D.R, Yu, X, Brewster, A, Sowd, G.A, Xie, C.L, Vila, S, Gai, D, Fanning, E, Chen, X.S.
登録日2012-03-08
公開日2012-06-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (5 Å)
主引用文献Structural basis for the interaction of a hexameric replicative helicase with the regulatory subunit of human DNA polymerase alpha-primase.
J.Biol.Chem., 287, 2012
4E07
DownloadVisualize
BU of 4e07 by Molmil
ParF-AMPPCP-C2221 form
分子名称: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, Plasmid partitioning protein ParF
著者Schumacher, M.A, Ye, Q, Barge, M.R, Barilla, D, Hayes, F.
登録日2012-03-02
公開日2012-06-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural Mechanism of ATP-induced Polymerization of the Partition Factor ParF: IMPLICATIONS FOR DNA SEGREGATION.
J.Biol.Chem., 287, 2012
4I13
DownloadVisualize
BU of 4i13 by Molmil
Nanobody ca1697 binding to the DHFR.folate binary complex
分子名称: Dihydrofolate reductase, FOLIC ACID, Protein ca1697 (nanobody)
著者Oyen, D, Steyaert, J, Barlow, J.N.
登録日2012-11-19
公開日2013-11-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Exploring an alternative antibody interaction mechanism
To be Published
4HZA
DownloadVisualize
BU of 4hza by Molmil
Crystal Structure of the Immunoglobulin variable domain of Nectin-2 in monoclinic form
分子名称: Poliovirus receptor-related protein 2
著者Ramagopal, U.A, Samanta, D, Nathenson, S.G, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
登録日2012-11-14
公開日2013-01-30
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structure of the Immunoglobulin variable domain of Nectin-2 in monoclinic form
To be published
4HZF
DownloadVisualize
BU of 4hzf by Molmil
structure of the wild type Catabolite gene Activator Protein
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator, GLYCEROL, ...
著者Pohl, E, Townsend, P.D, Rodgers, T, Burnell, D, McLeish, T.C.B, Wilson, M.R, Cann, M.
登録日2012-11-15
公開日2013-10-30
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Modulation of global low-frequency motions underlies allosteric regulation: demonstration in CRP/FNR family transcription factors.
Plos Biol., 11, 2013
4I3E
DownloadVisualize
BU of 4i3e by Molmil
Crystal structure of Staphylococcal IMPase - I complexed with products.
分子名称: GLYCEROL, Inositol monophosphatase family protein, MAGNESIUM ION, ...
著者Bhattacharyya, S, Dutta, A, Dutta, D, Das, A.K.
登録日2012-11-26
公開日2013-12-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of Staphylococcal IMPase - I complexed with products.
To be Published
4E1T
DownloadVisualize
BU of 4e1t by Molmil
X-ray crystal structure of the transmembrane beta-domain from invasin from Yersinia pseudotuberculosis
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Invasin
著者Fairman, J.W, Dautin, N, Wojtowicz, D, Wei, L, Noinaj, N, Barnard, T.J, Udho, E, Finkelstein, A, Przytycka, T.M, Cherezov, V, Buchanan, S.K.
登録日2012-03-07
公開日2012-06-13
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.263 Å)
主引用文献Crystal Structures of the Outer Membrane Domain of Intimin and Invasin from Enterohemorrhagic E. coli and Enteropathogenic Y. pseudotuberculosis.
Structure, 20, 2012

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon