Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 22600 件

4CZ8
DownloadVisualize
BU of 4cz8 by Molmil
Structure of the sodium proton antiporter PaNhaP from Pyrococcus abyssii at pH 8.
分子名称: CITRATE ANION, NA+/H+ ANTIPORTER, PUTATIVE, ...
著者Woehlert, D, Kuhlbrandt, W, Yildiz, O.
登録日2014-04-16
公開日2014-12-17
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Structure and Substrate Ion Binding in the Sodium/Proton Antiporter Panhap.
Elife, 3, 2014
8QFH
DownloadVisualize
BU of 8qfh by Molmil
Room temperature crystal structure of the Photoactivated Adenylate Cyclase OaPAC with ATP bound
分子名称: ADENOSINE-5'-TRIPHOSPHATE, FLAVIN MONONUCLEOTIDE, Family 3 adenylate cyclase, ...
著者Chretien, A, Nagel, M.F, Botha, S, de Wijn, R, Brings, L, Doerner, K, Han, H, C.P.Koliyadu, J, Letrun, R, Round, A, Sato, T, Schmidt, C, Secareanu, R, von Stetten, D, Vakili, M, Wrona, A, Bean, R, Mancuso, A, Schulz, J, R.Pearson, A, Kottke, T, Lorenzen, K, Schubert, R.
登録日2023-09-04
公開日2023-11-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Light-induced Trp in /Met out Switching During BLUF Domain Activation in ATP-bound Photoactivatable Adenylate Cyclase OaPAC.
J.Mol.Biol., 436, 2024
8QFJ
DownloadVisualize
BU of 8qfj by Molmil
Room temperature crystal structure of the Photoactivated Adenylate Cyclase OaPAC after blue light excitation at 2.3 us delay
分子名称: ADENOSINE-5'-TRIPHOSPHATE, FLAVIN MONONUCLEOTIDE, Family 3 adenylate cyclase, ...
著者Chretien, A, Nagel, M.F, Botha, S, de Wijn, R, Brings, L, Doerner, K, Han, H, C.P.Koliyadu, J, Letrun, R, Round, A, Sato, T, Schmidt, C, Secareanu, R, von Stetten, D, Vakili, M, Wrona, A, Bean, R, Mancuso, A, Schulz, J, R.Pearson, A, Kottke, T, Lorenzen, K, Schubert, R.
登録日2023-09-04
公開日2023-11-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Light-induced Trp in /Met out Switching During BLUF Domain Activation in ATP-bound Photoactivatable Adenylate Cyclase OaPAC.
J.Mol.Biol., 436, 2024
4CZA
DownloadVisualize
BU of 4cza by Molmil
Structure of the sodium proton antiporter PaNhaP from Pyrococcus abyssii with bound thallium ion.
分子名称: ACETATE ION, NA+/H+ ANTIPORTER, PUTATIVE, ...
著者Woehlert, D, Kuhlbrandt, W, Yildiz, O.
登録日2014-04-16
公開日2014-12-17
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structure and substrate ion binding in the sodium/proton antiporter PaNhaP.
Elife, 3, 2014
8QFE
DownloadVisualize
BU of 8qfe by Molmil
Cryogenic crystal structure of the Photoactivated Adenylate Cyclase OaPAC
分子名称: FLAVIN MONONUCLEOTIDE, Family 3 adenylate cyclase, MAGNESIUM ION
著者Chretien, A, Nagel, M.F, Botha, S, de Wijn, R, Brings, L, Doerner, K, Han, H, Koliyadu, J, Letrun, R, Round, A, Sato, T, Schmidt, C, Secareanu, R, von Stetten, D, Vakili, M, Wrona, A, Bean, R, Mancuso, A, Schulz, J, Pearson, A, Kottke, T, Lorenzen, K, Schubert, R.
登録日2023-09-04
公開日2023-11-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Light-induced Trp in /Met out Switching During BLUF Domain Activation in ATP-bound Photoactivatable Adenylate Cyclase OaPAC.
J.Mol.Biol., 436, 2024
3JUZ
DownloadVisualize
BU of 3juz by Molmil
Crystal structure of a mutant of RelB dimerization domain(M5)
分子名称: Transcription factor RelB
著者Vu, D, Huang, D.B, Ghosh, G.
登録日2009-09-15
公開日2010-11-24
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Instability of the RelB dimerization domain is functionally important
To be Published
8QFI
DownloadVisualize
BU of 8qfi by Molmil
Room temperature crystal structure of the Photoactivated Adenylate Cyclase OaPAC after blue light excitation at 1.8 us delay
分子名称: ADENOSINE-5'-TRIPHOSPHATE, FLAVIN MONONUCLEOTIDE, Family 3 adenylate cyclase, ...
著者Chretien, A, Nagel, M.F, Botha, S, de Wijn, R, Brings, L, Doerner, K, Han, H, C.P.Koliyadu, J, Letrun, R, Sato, T, Round, A, Schmidt, C, Secareanu, R, von Stetten, D, Vakili, M, Wrona, A, Bean, R, Mancuso, A, Schulz, J, R.Pearson, A, Kottke, T, Lorenzen, K, Schubert, R.
登録日2023-09-04
公開日2023-11-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Light-induced Trp in /Met out Switching During BLUF Domain Activation in ATP-bound Photoactivatable Adenylate Cyclase OaPAC.
J.Mol.Biol., 436, 2024
6S5A
DownloadVisualize
BU of 6s5a by Molmil
CRYSTAL STRUCTURE OF FC P329G LALA WITH ANTI FC P329G FAB
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Fc P329G LALA, ...
著者Ehler, A, Darowski, D, Jost, C, Stubenrauch, K, Wessels, U, Benz, J, Birk, M, Freimoser-Grundschober, A, Bruenker, P, Moessner, E, Umana, P, Kobold, S, Klein, C.
登録日2019-07-01
公開日2019-09-25
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献P329G-CAR-J: a novel Jurkat-NFAT-based CAR-T reporter system recognizing the P329G Fc mutation.
Protein Eng.Des.Sel., 32, 2019
6RXI
DownloadVisualize
BU of 6rxi by Molmil
In-flow serial synchrotron crystallography using a 3D-printed microfluidic device (3D-MiXD): Lysozyme
分子名称: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, Lysozyme C, ...
著者Monteiro, D.C.F, von Stetten, D, Pearson, A.R, Trebbin, M.
登録日2019-06-08
公開日2020-03-18
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献3D-MiXD: 3D-printed X-ray-compatible microfluidic devices for rapid, low-consumption serial synchrotron crystallography data collection in flow.
Iucrj, 7, 2020
8QPC
DownloadVisualize
BU of 8qpc by Molmil
18mer DNA mimic Foldamer with an Aromatic linker in complex with Sac7d V26A/M29A protein
分子名称: DNA-binding protein 7b, N-[2-(2-methyl-1,3-dioxolan-2-yl)phenyl]-2-{[5-(trifluoromethyl)pyridin-2-yl]amino}pyridine-4-carboxamide
著者Deepak, D, Corvaglia, V, Wu, J, Huc, I.
登録日2023-10-01
公開日2023-11-08
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3.24 Å)
主引用文献DNA-Mimic Foldamer Recognition of a Chromosomal Protein
To Be Published
7X13
DownloadVisualize
BU of 7x13 by Molmil
Structure of IgG-Fc hexamer
分子名称: Immunoglobulin gamma-1 heavy chain
著者Yuan, D, Weixin, Y, Xiao, F.
登録日2022-02-23
公開日2023-03-01
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structure of IgG-Fc hexamer
To Be Published
3J1V
DownloadVisualize
BU of 3j1v by Molmil
A refined model of the prototypical Salmonella typhimurium T3SS basal body reveals the molecular basis for its assembly
分子名称: Protein InvG
著者Sgourakis, N.G, Bergeron, J.R.C, Strynadka, N.J.C, Baker, D.
登録日2012-07-08
公開日2013-05-22
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (11.7 Å)
主引用文献A Refined Model of the Prototypical Salmonella SPI-1 T3SS Basal Body Reveals the Molecular Basis for Its Assembly.
Plos Pathog., 9, 2013
6RNU
DownloadVisualize
BU of 6rnu by Molmil
BCL-XL in a complex with a covalent small molecule inhibitor
分子名称: 4-(4-fluorophenyl)-3-fluorosulfonyl-benzoic acid, BROMIDE ION, Bcl-2-like protein 1
著者Hargreaves, D.
登録日2019-05-09
公開日2019-10-02
最終更新日2019-11-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Discovery and optimization of covalent Bcl-xL antagonists.
Bioorg.Med.Chem.Lett., 29, 2019
3J68
DownloadVisualize
BU of 3j68 by Molmil
Structural mechanism of the dynein powerstroke (pre-powerstroke state)
分子名称: Dynein motor domain
著者Lin, J, Okada, K, Raytchev, M, Smith, M.C, Nicastro, D.
登録日2013-12-23
公開日2014-04-23
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (30 Å)
主引用文献Structural mechanism of the dynein power stroke.
Nat.Cell Biol., 16, 2014
6RPL
DownloadVisualize
BU of 6rpl by Molmil
Expanded bat circovirus with DNA VLP
分子名称: Capsid protein
著者Forwood, J.K, Luque, D, Mata, C.P, Das, S, Raidal, S.
登録日2019-05-14
公開日2020-11-25
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.85 Å)
主引用文献expanded bat circovirus with DNA VLP
To Be Published
6RPU
DownloadVisualize
BU of 6rpu by Molmil
Structure of the ternary complex of the IMPDH enzyme from Ashbya gossypii bound to the dinucleoside polyphosphate Ap5G and GDP
分子名称: ACETATE ION, GUANOSINE-5'-DIPHOSPHATE, Inosine-5'-monophosphate dehydrogenase, ...
著者Buey, R.M, Fernandez-Justel, D, Revuelta, J.L.
登録日2019-05-14
公開日2019-08-28
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献The Bateman domain of IMP dehydrogenase is a binding target for dinucleoside polyphosphates.
J.Biol.Chem., 294, 2019
3J67
DownloadVisualize
BU of 3j67 by Molmil
Structural mechanism of the dynein powerstroke (post-powerstroke state)
分子名称: Dynein motor domain
著者Lin, J, Okada, K, Raytchev, M, Smith, M.C, Nicastro, D.
登録日2013-12-22
公開日2014-04-23
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (34 Å)
主引用文献Structural mechanism of the dynein power stroke.
Nat.Cell Biol., 16, 2014
6RS0
DownloadVisualize
BU of 6rs0 by Molmil
GOLGI ALPHA-MANNOSIDASE II in complex with (2S,3S,4R,5R)-1-(2-(Benzyloxy)ethyl)-2-(hydroxymethyl)piperidine-3,4,5-triol
分子名称: (2~{S},3~{S},4~{R})-2-(hydroxymethyl)-1-(2-phenylmethoxyethyl)piperidine-3,4,5-triol, 1,2-ETHANEDIOL, Alpha-mannosidase 2, ...
著者Armstrong, Z, Lahav, D, Johnson, R, Kuo, C.L, Beenakker, T.J.M, de Boer, C, Wong, C.S, van Rijssel, E.R, Debets, M, Geurink, P.P, Ovaa, H, van der Stelt, M, Codee, J.D.C, Aerts, J.M.F.G, Wu, L, Overkleeft, H.S, Davies, G.J.
登録日2019-05-20
公開日2020-07-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Manno- epi -cyclophellitols Enable Activity-Based Protein Profiling of Human alpha-Mannosidases and Discovery of New Golgi Mannosidase II Inhibitors.
J.Am.Chem.Soc., 142, 2020
3J9R
DownloadVisualize
BU of 3j9r by Molmil
Atomic structures of a bactericidal contractile nanotube in its pre- and post-contraction states
分子名称: sheath
著者Ge, P, Scholl, D, Leiman, P.G, Yu, X, Miller, J.F, Zhou, Z.H.
登録日2015-02-17
公開日2015-04-01
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Atomic structures of a bactericidal contractile nanotube in its pre- and postcontraction states.
Nat.Struct.Mol.Biol., 22, 2015
8Q85
DownloadVisualize
BU of 8q85 by Molmil
Outer kinetochore Dam1 protomer monomer Ndc80-Nuf2 coiled-coil complex
分子名称: DASH complex subunit ASK1, DASH complex subunit DAD1, DASH complex subunit DAD2, ...
著者Muir, K.W, Barford, D.
登録日2023-08-17
公開日2023-12-06
最終更新日2023-12-20
実験手法ELECTRON MICROSCOPY (3.97 Å)
主引用文献Structural mechanism of outer kinetochore Dam1-Ndc80 complex assembly on microtubules.
Science, 382, 2023
8R3T
DownloadVisualize
BU of 8r3t by Molmil
Cofactor-free Tau 4R2N isoform
分子名称: Microtubule-associated protein tau
著者Limorenko, G, Tatli, M, Kolla, R, Nazarov, S, Weil, M.T, Schondorf, D.C, Geist, D, Reinhardt, P, Ehrnhoefer, D.E, Stahlberg, H, Gasparini, L, Lashuel, H.A.
登録日2023-11-10
公開日2023-12-06
最終更新日2024-01-24
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Fully co-factor-free ClearTau platform produces seeding-competent Tau fibrils for reconstructing pathological Tau aggregates.
Nat Commun, 14, 2023
6RKB
DownloadVisualize
BU of 6rkb by Molmil
Crystal structure of human monoamine oxidase B in complex with styrylpiperidine analogue 1
分子名称: 4-[(~{E})-2-(4-fluorophenyl)ethenyl]-1-[(~{E})-prop-1-enyl]piperidine, Amine oxidase [flavin-containing] B, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Iacovino, L.G, Knez, D, Colettis, N, Sova, M, Pislar, A, Higgs, J, Kamecki, F, Mangialavori, I, Dolsak, A, Zakelj, S, Trontelj, J, Kos, J, Marder, N.M, Gobec, S, Binda, C.
登録日2019-04-30
公開日2020-01-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Stereoselective Activity of 1-Propargyl-4-styrylpiperidine-like Analogues That Can Discriminate between Monoamine Oxidase Isoforms A and B.
J.Med.Chem., 63, 2020
6RKP
DownloadVisualize
BU of 6rkp by Molmil
Crystal structure of human monoamine oxidase B in complex with styrylpiperidine analogue 84
分子名称: 1-[(~{E})-prop-1-enyl]-4-[(~{E})-2-[4-(trifluoromethyl)phenyl]ethenyl]piperidine, Amine oxidase [flavin-containing] B, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Iacovino, L.G, Knez, D, Colettis, N, Sova, M, Pislar, A, Higgs, J, Kamecki, F, Mangialavori, I, Dolsak, A, Zakelj, S, Trontelj, J, Kos, J, Marder, N.M, Gobec, S, Binda, C.
登録日2019-04-30
公開日2020-01-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Stereoselective Activity of 1-Propargyl-4-styrylpiperidine-like Analogues That Can Discriminate between Monoamine Oxidase Isoforms A and B.
J.Med.Chem., 63, 2020
3JCZ
DownloadVisualize
BU of 3jcz by Molmil
Structure of bovine glutamate dehydrogenase in the unliganded state
分子名称: Glutamate dehydrogenase 1, mitochondrial
著者Borgnia, M.J, Banerjee, S, Merk, A, Matthies, D, Bartesaghi, A, Rao, P, Pierson, J, Earl, L.A, Falconieri, V, Subramaniam, S, Milne, J.L.S.
登録日2016-03-27
公開日2016-04-27
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.26 Å)
主引用文献Using Cryo-EM to Map Small Ligands on Dynamic Metabolic Enzymes: Studies with Glutamate Dehydrogenase.
Mol.Pharmacol., 89, 2016
3JD3
DownloadVisualize
BU of 3jd3 by Molmil
Glutamate dehydrogenase in complex with NADH and GTP, open conformation
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, GUANOSINE-5'-TRIPHOSPHATE, Glutamate dehydrogenase 1, ...
著者Borgnia, M.J, Banerjee, S, Merk, A, Matthies, D, Bartesaghi, A, Rao, P, Pierson, J, Earl, L.A, Falconieri, V, Subramaniam, S, Milne, J.L.S.
登録日2016-03-28
公開日2016-04-27
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Using Cryo-EM to Map Small Ligands on Dynamic Metabolic Enzymes: Studies with Glutamate Dehydrogenase.
Mol.Pharmacol., 89, 2016

226262

件を2024-10-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon