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PDB: 22600 件

7WJ2
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BU of 7wj2 by Molmil
Crystal structure of HLA-C*1402 complexed with 8-mer HIV gag peptide
分子名称: 1,2-ETHANEDIOL, 8-mer peptide, ACETATE ION, ...
著者Kuroha, J, Morita, D, Asa, M, Sugita, M.
登録日2022-01-05
公開日2022-06-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献Crystal structures of N-myristoylated lipopeptide-bound HLA class I complexes indicate reorganization of B-pocket architecture upon ligand binding.
J.Biol.Chem., 298, 2022
2MR6
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BU of 2mr6 by Molmil
Solution NMR Structure of De novo designed protein, Northeast Structural Genomics Consortium (NESG) Target OR462
分子名称: De novo designed Protein OR462
著者Xu, X, Nivon, L, Federizon, J.F, Maglaqui, M, Janjua, H, Mao, L, Xiao, R, Kornhaber, G, Baker, D, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
登録日2014-07-01
公開日2014-08-06
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution NMR Structure of De novo designed protein, Northeast Structural Genomics Consortium (NESG) Target OR462
To be Published
7WT3
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BU of 7wt3 by Molmil
Crystal structure of HLA-A*2402 complexed with 4-mer lipopeptide
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-mer lipopeptide, ...
著者Asa, M, Morita, D, Sugita, M.
登録日2022-02-03
公開日2022-06-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.887655 Å)
主引用文献Crystal structures of N-myristoylated lipopeptide-bound HLA class I complexes indicate reorganization of B-pocket architecture upon ligand binding.
J.Biol.Chem., 298, 2022
7WGT
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BU of 7wgt by Molmil
X-ray structure of thermostabilized Drosophila dopamine transporter with GABA transporter1-like substitutions in the binding site, in complex with NO711.
分子名称: 1-(2-{[(diphenylmethylidene)amino]oxy}ethyl)-1,2,5,6-tetrahydropyridine-3-carboxylic acid, Antibody fragment (9D5) heavy chain, Antibody fragment (9D5) light chain, ...
著者Joseph, D, Penmatsa, A.
登録日2021-12-28
公開日2022-06-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structural insights into GABA transport inhibition using an engineered neurotransmitter transporter.
Embo J., 41, 2022
8PIJ
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Neisseria meningitidis Type IV pilus SB-GATDH variant bound to the C24 nanobody
分子名称: (2~{R})-~{N}-[(2~{R},3~{S},4~{S},5~{R},6~{R})-5-acetamido-2-methyl-4,6-bis(oxidanyl)oxan-3-yl]-2,3-bis(oxidanyl)propanamide, C24 nanobody, Pilin, ...
著者Fernandez-Martinez, D, Dumenil, G.
登録日2023-06-21
公開日2024-04-03
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Cryo-EM structures of type IV pili complexed with nanobodies reveal immune escape mechanisms.
Nat Commun, 15, 2024
8PJP
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BU of 8pjp by Molmil
Neisseria meningitidis PilE, SB-GATDH variant, bound to the F10 nanobody
分子名称: (2~{R})-~{N}-[(2~{R},3~{S},4~{S},5~{R},6~{R})-5-acetamido-2-methyl-4,6-bis(oxidanyl)oxan-3-yl]-2,3-bis(oxidanyl)propanamide, Nanobody F10, Pilin, ...
著者Fernandez-Martinez, D, Dumenil, G.
登録日2023-06-23
公開日2024-04-03
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (2.92 Å)
主引用文献Cryo-EM structures of type IV pili complexed with nanobodies reveal immune escape mechanisms.
Nat Commun, 15, 2024
7WIM
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BU of 7wim by Molmil
Crystal structure of Arabidopsis thaliana FKBP43 N-terminal domain
分子名称: Peptidyl-prolyl cis-trans isomerase FKBP43
著者Singh, A.K, Saharan, K, Baral, S, Vasudevan, D.
登録日2022-01-03
公開日2022-09-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献The plant nucleoplasmin AtFKBP43 needs its extended arms for histone interaction.
Biochim Biophys Acta Gene Regul Mech, 1865, 2022
8PUI
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human PHOX2B C-terminal domain including the polyA fragment at 298K
分子名称: Paired mesoderm homeobox protein 2B
著者Anton, R, Trevino, M.A, Pantoja-Uceda, D, Felix, S, Babu, M, Cabrita, E.J, Zweckstetter, M, Tinnefeld, P, Vera, A.M, Oroz, J.
登録日2023-07-17
公開日2024-03-13
実験手法SOLUTION NMR
主引用文献Alternative low-populated conformations prompt phase transitions in polyalanine repeat expansions.
Nat Commun, 15, 2024
6RRH
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BU of 6rrh by Molmil
GOLGI ALPHA-MANNOSIDASE II
分子名称: 1,2-ETHANEDIOL, Alpha-mannosidase 2, ZINC ION
著者Armstrong, Z, Lahav, D, Johnson, R, Kuo, C.L, Beenakker, T.J.M, de Boer, C, Wong, C.S, van Rijssel, E.R, Debets, M, Geurink, P.P, Ovaa, H, van der Stelt, M, Codee, J.D.C, Aerts, J.M.F.G, Wu, L, Overkleeft, H.S, Davies, G.J.
登録日2019-05-18
公開日2020-07-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Manno- epi -cyclophellitols Enable Activity-Based Protein Profiling of Human alpha-Mannosidases and Discovery of New Golgi Mannosidase II Inhibitors.
J.Am.Chem.Soc., 142, 2020
3ILD
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BU of 3ild by Molmil
Structure of ORF157-K57A from Acidianus filamentous virus 1
分子名称: MAGNESIUM ION, Putative uncharacterized protein
著者Goulet, A, Lichiere, J, Prangishvili, D, van Tilbeurgh, H, Cambillau, C, Campanacci, V.
登録日2009-08-07
公開日2010-03-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献ORF157 from the archaeal virus Acidianus filamentous virus 1 defines a new class of nuclease
J.Virol., 84, 2010
8PTL
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BU of 8ptl by Molmil
human PHOX2B C-terminal domain including the polyA fragment at 278K
分子名称: Paired mesoderm homeobox protein 2B
著者Anton, R, Trevino, M.A, Pantoja-Uceda, D, Felix, S, Babu, M, Cabrita, E.J, Zweckstetter, M, Tinnefeld, P, Vera, A.M, Oroz, J.
登録日2023-07-14
公開日2024-03-13
実験手法SOLUTION NMR
主引用文献Alternative low-populated conformations prompt phase transitions in polyalanine repeat expansions.
Nat Commun, 15, 2024
8PIZ
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BU of 8piz by Molmil
Neisseria meningitidis Type IV pilus SB-DATDH variant bound to the C24 nanobody
分子名称: 2,4-bisacetamido-2,4,6-trideoxy-beta-D-glucopyranose, C24 nanobody, Pilin, ...
著者Fernandez-Martinez, D, Dumenil, G.
登録日2023-06-22
公開日2024-04-03
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (2.75 Å)
主引用文献Cryo-EM structures of type IV pili complexed with nanobodies reveal immune escape mechanisms.
Nat Commun, 15, 2024
7W80
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BU of 7w80 by Molmil
Crystal Structure of the Heterodimeric HIF-2 in Complex with Antagonist Belzutifan
分子名称: 3-{[(1S,2S,3R)-2,3-difluoro-1-hydroxy-7-(methylsulfonyl)-2,3-dihydro-1H-inden-4-yl]oxy}-5-fluorobenzonitrile, Aryl hydrocarbon receptor nuclear translocator, Endothelial PAS domain-containing protein 1
著者Ren, X, Diao, X, Zhuang, J, Wu, D.
登録日2021-12-07
公開日2022-09-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.754 Å)
主引用文献Structural basis for the allosteric inhibition of hypoxia-inducible factor (HIF)-2 by belzutifan.
Mol.Pharmacol., 2022
2N7O
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BU of 2n7o by Molmil
NMR Structure of Peptide PG-990 in DPC micelles
分子名称: Peptide PG-990
著者Carotenuto, A, Merlino, F, Chai, M, Brancaccio, D, Yousif, A, Novellino, E, Hruby, V, Grieco, P.
登録日2015-09-16
公開日2015-12-16
最終更新日2017-10-11
実験手法SOLUTION NMR
主引用文献Discovery of Novel Potent and Selective Agonists at the Melanocortin-3 Receptor.
J.Med.Chem., 58, 2015
3IV5
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BU of 3iv5 by Molmil
Crystal structure of Fis bound to 27 bp optimal binding sequence F1
分子名称: DNA (27-MER), DNA-binding protein fis
著者Stella, S, Cascio, D, Johnson, R.C.
登録日2009-08-31
公開日2010-04-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The shape of the DNA minor groove directs binding by the DNA-bending protein Fis.
Genes Dev., 24, 2010
3IVY
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BU of 3ivy by Molmil
Crystal structure of Mycobacterium tuberculosis cytochrome P450 CYP125, p212121 crystal form
分子名称: Cytochrome P450 CYP125, PROTOPORPHYRIN IX CONTAINING FE
著者McLean, K.J, Levy, C, Munro, A.W, Leys, D.
登録日2009-09-02
公開日2009-11-03
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.352 Å)
主引用文献The Structure of Mycobacterium tuberculosis CYP125: molecular basis for cholesterol binding in a P450 needed for host infection.
J.Biol.Chem., 284, 2009
7WJH
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BU of 7wjh by Molmil
Crystal structure of Bcl-xL bound to the BH3 domain of human Pxt1
分子名称: Bcl-2-like protein 1, MAGNESIUM ION, Peroxisomal testis-specific protein 1, ...
著者Lim, D, Ku, B.
登録日2022-01-06
公開日2022-09-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.698 Å)
主引用文献Structural and biochemical analyses of Bcl-xL in complex with the BH3 domain of peroxisomal testis-specific 1.
Biochem.Biophys.Res.Commun., 625, 2022
3ISH
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BU of 3ish by Molmil
Crystal structure of Helicobacter pylori thioredoxin reductase
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Thioredoxin reductase
著者Sanders, D, Obiero, J, van Straaten, K.
登録日2009-08-25
公開日2009-10-06
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Crystal structure of Helicobacter pylori thioredoxin reductase
To be Published
3IWE
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BU of 3iwe by Molmil
Crystal Structure of human type-I N-myristoyltransferase with bound myristoyl-CoA and inhibitor DDD85646
分子名称: 2,6-dichloro-4-(2-piperazin-1-ylpyridin-4-yl)-N-(1,3,5-trimethyl-1H-pyrazol-4-yl)benzenesulfonamide, Glycylpeptide N-tetradecanoyltransferase 1, TETRADECANOYL-COA
著者Qiu, W, Hutchinson, A, Wernimont, A, Lin, Y.-H, Kania, A, Ravichandran, M, Kozieradzki, I, Cossar, D, Schapira, M, Arrowsmith, C.H, Bountra, C, Weigelt, J, Edwards, A.M, Wyatt, P.G, Ferguson, M.A.J, Frearson, J.A, Brand, S.Y, Robinson, D.A, Bochkarev, A, Hui, R, Structural Genomics Consortium (SGC)
登録日2009-09-02
公開日2009-09-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Crystal Structure of human type-I N-myristoyltransferase with bound myristoyl-CoA and inhibitor DDD85646
To be Published
6S09
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BU of 6s09 by Molmil
C-terminally extended and N-terminally truncated variant of FimA E. coli at 1.5 Angstrom resolution
分子名称: ACETIC ACID, FimA, SODIUM ION, ...
著者Zyla, D, Echeverria, B, Glockshuber, R.
登録日2019-06-14
公開日2020-07-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.502 Å)
主引用文献Donor strand sequence, rather than donor strand orientation, determines the stability and non-equilibrium folding of the type 1 pilus subunit FimA.
J.Biol.Chem., 295, 2020
8PM9
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Crystal structure of human wild type transthyretin in complex with PITB (Pharmacokinetically Improved TTR Binder)
分子名称: (3-fluoranyl-5-oxidanyl-phenyl)-(3-methoxy-5-nitro-4-oxidanyl-phenyl)methanone, Transthyretin
著者Varejao, N, Pinheiro, F, Pallares, I, Ventura, S, Reverter, D.
登録日2023-06-28
公開日2024-05-08
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献PITB: A high affinity transthyretin aggregation inhibitor with optimal pharmacokinetic properties.
Eur.J.Med.Chem., 261, 2023
8PM8
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V30M Transthyretin structure in complex with Tolcalpone
分子名称: Tolcapone, Transthyretin
著者Varejao, N, Pinheiro, F, Pallares, I, Ventura, S, Reverter, D.
登録日2023-06-28
公開日2024-05-08
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献PITB: A high affinity transthyretin aggregation inhibitor with optimal pharmacokinetic properties.
Eur.J.Med.Chem., 261, 2023
8PMA
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Crystal structure of human V30M transthyretin in complex with PITB (Pharmacokinetically Improved TTR Binder)
分子名称: (3-fluoranyl-5-oxidanyl-phenyl)-(3-methoxy-5-nitro-4-oxidanyl-phenyl)methanone, Transthyretin
著者Varejao, N, Pinheiro, F, Pallares, I, Ventura, S, Reverter, D.
登録日2023-06-28
公開日2024-05-08
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献PITB: A high affinity transthyretin aggregation inhibitor with optimal pharmacokinetic properties.
Eur.J.Med.Chem., 261, 2023
3IW2
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Crystal structure of Mycobacterium tuberculosis cytochrome P450 CYP125 in complex with econazole
分子名称: 4-[(2R)-2-[(4-chlorobenzyl)oxy]-2-(2,4-dichlorophenyl)ethyl]-1H-imidazole, Cytochrome P450 CYP125, PROTOPORPHYRIN IX CONTAINING FE
著者McLean, K.J, Levy, C, Munro, A.W, Leys, D.
登録日2009-09-02
公開日2009-11-03
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献The Structure of Mycobacterium tuberculosis CYP125: molecular basis for cholesterol binding in a P450 needed for host infection.
J.Biol.Chem., 284, 2009
8PVT
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Manganese-dependent transcriptional repressor DR2539 complexed with cadmium (SAD 7 keV)
分子名称: CADMIUM ION, Iron dependent repressor, putative
著者Mota, C, De Sanctis, D.
登録日2023-07-18
公開日2024-05-08
最終更新日2024-08-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Metal ion activation and DNA recognition by the Deinococcus radiodurans manganese sensor DR2539.
Febs J., 291, 2024

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