Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 22544 件

5LSX
DownloadVisualize
BU of 5lsx by Molmil
Structure of the Epigenetic Oncogene MMSET and inhibition by N-Alkyl Sinefungin Derivatives
分子名称: Histone-lysine N-methyltransferase SETD2, ZINC ION, [(2~{R},5~{S})-1-[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]-5-azaniumyl-6-oxidanyl-6-oxidanylidene-hexan-2-yl]-(phenylmethyl)azanium
著者Tisi, D, Pathuri, P, Heightman, T.
登録日2016-09-05
公開日2016-10-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of the Epigenetic Oncogene MMSET and Inhibition by N-Alkyl Sinefungin Derivatives.
ACS Chem. Biol., 11, 2016
5LKX
DownloadVisualize
BU of 5lkx by Molmil
Crystal structure of the p300 acetyltransferase catalytic core with propionyl-coenzyme A.
分子名称: DIMETHYL SULFOXIDE, GLYCEROL, Histone acetyltransferase p300,Histone acetyltransferase p300, ...
著者Kaczmarska, Z, Ortega, E, Marquez, J.A, Panne, D.
登録日2016-07-25
公開日2016-11-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Structure of p300 in complex with acyl-CoA variants.
Nat. Chem. Biol., 13, 2017
6LGW
DownloadVisualize
BU of 6lgw by Molmil
Structure of Rabies virus glycoprotein in complex with neutralizing antibody 523-11 at acidic pH
分子名称: Glycoprotein, scFv 523-11
著者Yang, F.L, Lin, S, Ye, F, Yang, J, Qi, J.X, Chen, Z.J, Lin, X, Wang, J.C, Yue, D, Cheng, Y.W, Chen, Z.M, Chen, H, You, Y, Zhang, Z.L, Yang, Y, Yang, M, Sun, H.L, Li, Y.H, Cao, Y, Yang, S.Y, Wei, Y.Q, Gao, G.F, Lu, G.W.
登録日2019-12-06
公開日2020-02-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.9037 Å)
主引用文献Structural Analysis of Rabies Virus Glycoprotein Reveals pH-Dependent Conformational Changes and Interactions with a Neutralizing Antibody.
Cell Host Microbe, 27, 2020
5LMZ
DownloadVisualize
BU of 5lmz by Molmil
Fluorinase from Streptomyces sp. MA37
分子名称: 1-DEAZA-ADENOSINE, CHLORIDE ION, Fluorinase, ...
著者Mann, G, O'Hagan, D, Naismith, J.H, Bandaranayaka, N.
登録日2016-08-02
公開日2016-08-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Identification of fluorinases from Streptomyces sp MA37, Norcardia brasiliensis, and Actinoplanes sp N902-109 by genome mining.
Chembiochem, 15, 2014
5LXQ
DownloadVisualize
BU of 5lxq by Molmil
Structure of PRL-1 in complex with the Bateman domain of CNNM2
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Metal transporter CNNM2, Protein tyrosine phosphatase type IVA 1, ...
著者GIMENEZ-Mascarell, P, Oyenarte, I, Hardy, S, Breiderhoff, T, Stuiver, M, Kostantin, E, Diercks, T, Pey, A.L, Ereno-ORBEA, J, Martinez-Chantar, M.L, Khalaf-Nazzal, R, Claverie-Martin, F, Muller, D, Tremblay, M, Martinez-Cruz, L.A.
登録日2016-09-22
公開日2016-12-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.335 Å)
主引用文献Structural Basis of the Oncogenic Interaction of Phosphatase PRL-1 with the Magnesium Transporter CNNM2.
J. Biol. Chem., 292, 2017
5LPZ
DownloadVisualize
BU of 5lpz by Molmil
Crystal structure of the BRI1 kinase domain (865-1196) in complex with ADP from Arabidopsis thaliana
分子名称: ADENOSINE-5'-DIPHOSPHATE, Protein BRASSINOSTEROID INSENSITIVE 1
著者Bojar, D, Martinez, J, Hothorn, M.
登録日2016-08-15
公開日2016-08-24
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Crystal structures of the phosphorylated BRI1 kinase domain and implications for brassinosteroid signal initiation.
Plant J., 78, 2014
5LTI
DownloadVisualize
BU of 5lti by Molmil
Crystal structure of the alpha subunit of heme dependent oxidative N-demethylase (HODM) in complex with the dimethylamine substrate
分子名称: DI(HYDROXYETHYL)ETHER, DIMETHYLAMINE, NITRIC OXIDE, ...
著者Ortmayer, M, Leys, D.
登録日2016-09-06
公開日2016-11-09
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献An oxidative N-demethylase reveals PAS transition from ubiquitous sensor to enzyme.
Nature, 539, 2016
5M0P
DownloadVisualize
BU of 5m0p by Molmil
Crystal structure of cytochrome P450 OleT F79A in complex with arachidonic acid
分子名称: PROTOPORPHYRIN IX CONTAINING FE, SODIUM ION, Terminal olefin-forming fatty acid decarboxylase, ...
著者Tee, K.L, Munro, A, Matthews, S, Leys, D, Levy, C.
登録日2016-10-05
公開日2017-01-11
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Catalytic Determinants of Alkene Production by the Cytochrome P450 Peroxygenase OleTJE.
J. Biol. Chem., 292, 2017
4UXX
DownloadVisualize
BU of 4uxx by Molmil
Structure of delta4-DgkA with AMPPCP in 9.9 MAG
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, ...
著者Li, D, Vogeley, L, Caffrey, M.
登録日2014-08-27
公開日2015-09-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.701 Å)
主引用文献Ternary Structure Reveals Mechanism of a Membrane Diacylglycerol Kinase.
Nat.Commun., 6, 2015
4UYO
DownloadVisualize
BU of 4uyo by Molmil
Structure of delta7-DgkA in 7.9 MAG by serial femtosecond crystatallography to 2.18 angstrom resolution
分子名称: (2R)-2,3-dihydroxypropyl (7Z)-hexadec-7-enoate, (2S)-2,3-dihydroxypropyl (7Z)-hexadec-7-enoate, CITRATE ANION, ...
著者Li, D, Howe, N, Other, O, Caffrey, M.
登録日2014-09-02
公開日2015-09-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Ternary Structure Reveals Mechanism of a Membrane Diacylglycerol Kinase.
Nat.Commun., 6, 2015
6LHY
DownloadVisualize
BU of 6lhy by Molmil
Crystal structure of ThsB
分子名称: DUF1863 domain-containing protein
著者Bae, E, Ka, D, Oh, H.
登録日2019-12-10
公開日2020-06-24
実験手法X-RAY DIFFRACTION (1.796 Å)
主引用文献Structural and functional evidence of bacterial antiphage protection by Thoeris defense system via NAD+degradation.
Nat Commun, 11, 2020
5LFP
DownloadVisualize
BU of 5lfp by Molmil
Crystal Structure of the Bacterial Proteasome Activator Bpa of Mycobacterium tuberculosis (space group P6322, SeMet)
分子名称: Bacterial proteasome activator
著者Bolten, M, Delley, C.L, Leibundgut, M, Boehringer, D, Ban, N, Weber-Ban, E.
登録日2016-07-04
公開日2016-11-23
最終更新日2016-12-14
実験手法X-RAY DIFFRACTION (3.303 Å)
主引用文献Structural Analysis of the Bacterial Proteasome Activator Bpa in Complex with the 20S Proteasome.
Structure, 24, 2016
6KXF
DownloadVisualize
BU of 6kxf by Molmil
The ishigamide ketosynthase/chain length factor
分子名称: ACP, Ketosynthase, [(3~{R})-2,2-dimethyl-4-[[3-[2-[[(~{E})-oct-2-enoyl]amino]ethylamino]-3-oxidanylidene-propyl]amino]-3-oxidanyl-4-oxidanylidene-butyl] dihydrogen phosphate
著者Du, D, Katsuyama, Y, Horiuchi, M, Fushinobu, S, Chen, A, Davis, T, Burkart, M, Ohnishi, Y.
登録日2019-09-10
公開日2020-05-06
最終更新日2020-07-08
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Structural basis for selectivity in a highly reducing type II polyketide synthase.
Nat.Chem.Biol., 16, 2020
5LG7
DownloadVisualize
BU of 5lg7 by Molmil
Solution NMR structure of Tryptophan to Arginine mutant of Arkadia RING domain
分子名称: E3 ubiquitin-protein ligase Arkadia, ZINC ION
著者Birkou, M, Chasapis, C.T, Loutsidou, A.K, Bentrop, D, Lelli, M, Herrmann, T, Episkopou, V, Spyroulias, G.A.
登録日2016-07-06
公開日2017-06-28
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献A Residue Specific Insight into the Arkadia E3 Ubiquitin Ligase Activity and Conformational Plasticity.
J. Mol. Biol., 429, 2017
5LKU
DownloadVisualize
BU of 5lku by Molmil
Crystal structure of the p300 acetyltransferase catalytic core with coenzyme A.
分子名称: COENZYME A, Histone acetyltransferase p300,Histone acetyltransferase p300, ZINC ION
著者Kaczmarska, Z, Ortega, E, Marquez, J.A, Panne, D.
登録日2016-07-25
公開日2016-11-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structure of p300 in complex with acyl-CoA variants.
Nat. Chem. Biol., 13, 2017
6KXD
DownloadVisualize
BU of 6kxd by Molmil
The ishigamide ketosynthase/chain length factor
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Ketosynthase, ...
著者Du, D, Katsuyama, Y, Horiuchi, M, Fushinobu, S, Chen, A, Davis, T, Burkart, M, Ohnishi, Y.
登録日2019-09-10
公開日2020-05-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural basis for selectivity in a highly reducing type II polyketide synthase.
Nat.Chem.Biol., 16, 2020
6L1R
DownloadVisualize
BU of 6l1r by Molmil
Crystal structure of N-terminal domain of human SSRP1
分子名称: FACT complex subunit SSRP1
著者Li, H.Y, Hu, T.T, Dou, Y.S, Su, D.
登録日2019-09-30
公開日2020-09-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.7984395 Å)
主引用文献Crystal structure of N-terminal domain of human SSRP1
To Be Published
5LPW
DownloadVisualize
BU of 5lpw by Molmil
Crystal structure of the apo-BRI1 kinase domain (865-1160)
分子名称: Protein BRASSINOSTEROID INSENSITIVE 1
著者Bojar, D, Martinez, J, Hothorn, M.
登録日2016-08-15
公開日2016-08-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.431 Å)
主引用文献Crystal structures of the phosphorylated BRI1 kinase domain and implications for brassinosteroid signal initiation.
Plant J., 78, 2014
5LP6
DownloadVisualize
BU of 5lp6 by Molmil
Crystal structure of Tubulin-Stathmin-TTL-Thiocolchicine Complex
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ...
著者Marangon, J, Christodoulou, M, Casagrande, F, Tiana, G, Dalla Via, L, Aliverti, A, Passarella, D, Cappelletti, G, Ricagno, S.
登録日2016-08-11
公開日2016-09-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Tools for the rational design of bivalent microtubule-targeting drugs.
Biochem. Biophys. Res. Commun., 479, 2016
5LRW
DownloadVisualize
BU of 5lrw by Molmil
Structure of Cezanne/OTUD7B OTU domain bound to ubiquitin
分子名称: GLYCEROL, OTU domain-containing protein 7B, Polyubiquitin-B
著者Mevissen, T.E.T, Kulathu, Y, Mulder, M.P.C, Geurink, P.P, Maslen, S.L, Gersch, M, Elliott, P.R, Burke, J.E, van Tol, B.D.M, Akutsu, M, El Oualid, F, Kawasaki, M, Freund, S.M.V, Ovaa, H, Komander, D.
登録日2016-08-22
公開日2016-10-19
最終更新日2017-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Molecular basis of Lys11-polyubiquitin specificity in the deubiquitinase Cezanne.
Nature, 538, 2016
5LSU
DownloadVisualize
BU of 5lsu by Molmil
Structure of the Epigenetic Oncogene MMSET and inhibition by N-Alkyl Sinefungin Derivatives
分子名称: Histone-lysine N-methyltransferase NSD2, S-ADENOSYLMETHIONINE, ZINC ION
著者Tisi, D, Pathuri, P, Heightman, T.
登録日2016-09-05
公開日2016-10-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Structure of the Epigenetic Oncogene MMSET and Inhibition by N-Alkyl Sinefungin Derivatives.
ACS Chem. Biol., 11, 2016
6LB5
DownloadVisualize
BU of 6lb5 by Molmil
Crystal structure of dimeric RXR-LBD complexed with full agonist NEt-3IB and TIF2 co-activator
分子名称: 6-[ethyl-[3-(2-methylpropoxy)-4-propan-2-yl-phenyl]amino]pyridine-3-carboxylic acid, Nuclear receptor coactivator 2, Retinoic acid receptor RXR-alpha
著者Imai, D, Numoto, N, Nakano, S, Kakuta, H, Ito, N.
登録日2019-11-13
公開日2020-11-18
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for the full and partial agonist activities of retinoid X receptor alpha ligands with an iso-butoxy and an isopropyl group
Biochem.Biophys.Res.Commun., 734, 2024
5LSR
DownloadVisualize
BU of 5lsr by Molmil
Carboxysome shell protein CcmP from Synechococcus elongatus PCC 7942
分子名称: CcmP, THIOCYANATE ION
著者Larsson, A.M, Hasse, D, Valegard, K, Andersson, I.
登録日2016-09-05
公開日2017-04-12
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structures of beta-carboxysome shell protein CcmP: ligand binding correlates with the closed or open central pore.
J. Exp. Bot., 68, 2017
4V0C
DownloadVisualize
BU of 4v0c by Molmil
Crystal Structure of the Kv7.1 proximal C-terminal Domain in Complex with Calmodulin
分子名称: CALCIUM ION, CALMODULIN, POTASSIUM VOLTAGE-GATED CHANNEL SUBFAMILY KQT MEMBER 1, ...
著者Sachyani, D, Hirsch, J.A.
登録日2014-09-14
公開日2014-11-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.86 Å)
主引用文献Structural Basis of a Kv7.1 Potassium Channel Gating Module: Studies of the Intracellular C-Terminal Domain in Complex with Calmodulin.
Structure, 22, 2014
6L97
DownloadVisualize
BU of 6l97 by Molmil
Complex of DNA polymerase IV and L-DNA duplex
分子名称: DNA (5'-D(*(0DG)P*(0DG)P*(0DG)P*(0DG)P*(0DG)P*(0DA)P*(0DA)P*(0DG)P*(0DG)P*(0DA)P*(0DT)P*(0DT)P*(0DC)P*(0DC))-3'), DNA (5'-D(P*(0DG)P*(0DG)P*(0DA)P*(0DA)P*(0DT)P*(0DC)P*(0DC)P*(0DT)P*(0DT)P*(0DC)P*(0DC)P*(0DC)P*(0DC)P*(0DC))-3'), DNA polymerase IV
著者Chung, H.S, An, J, Hwang, D.
登録日2019-11-08
公開日2020-07-08
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.362 Å)
主引用文献The crystal structure of a natural DNA polymerase complexed with mirror DNA.
Chem.Commun.(Camb.), 56, 2020

225946

件を2024-10-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon