Structure of delta4-DgkA with AMPPCP in 9.9 MAG

Summary for 4UXX

Related4UXW 4UXZ
DescriptorDIACYLGLYCEROL KINASE, CHLORIDE ION, SODIUM ION, ... (9 entities in total)
Functional Keywordstransferase, atp analogue, dgka, diacylglyerol kinase, in meso crystallization, lipid cubic phase, lipidic cubic phase, lipid mesophase, lipidic mesophase, membrane protein, 9.9 mag, monoacylglycerol, non- hydrolyzable atp analogue, nucleotide analogue
Biological sourceESCHERICHIA COLI K-12
Total number of polymer chains3
Total molecular weight45896.58
Li, D.,Vogeley, L.,Caffrey, M. (deposition date: 2014-08-27, release date: 2015-09-30, Last modification date: 2019-04-03)
Primary citation
Li, D.,Stansfeld, P.J.,Sansom, M.S.P.,Keogh, A.,Vogeley, L.,Howe, N.,Lyons, J.A.,Aragao, D.,Fromme, P.,Fromme, R.,Basu, S.,Grotjohann, I.,Kupitz, C.,Rendek, K.,Weierstall, U.,Zatsepin, N.A.,Cherezov, V.,Liu, W.,Bandaru, S.,English, N.J.,Gati, C.,Barty, A.,Yefanov, O.,Chapman, H.N.,Diederichs, K.,Messerschmidt, M.,Boutet, S.,Williams, G.J.,Marvin Seibert, M.,Caffrey, M.
Ternary Structure Reveals Mechanism of a Membrane Diacylglycerol Kinase.
Nat.Commun., 6:10140-, 2015
PubMed: 26673816 (PDB entries with the same primary citation)
DOI: 10.1038/NCOMMS10140
MImport into Mendeley
Experimental method

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.256500 6.0%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
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