4UXX
Structure of delta4-DgkA with AMPPCP in 9.9 MAG
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C | DIACYLGLYCEROL KINASE | polymer | 130 | 14240.5 | 3 | UniProt (P0ABN1) Pfam (PF01219) In PDB | ESCHERICHIA COLI K-12 | DAGK, DIGLYCERIDE KINASE, DGK |
2 | A | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) | |||
3 | A, B, C | SODIUM ION | non-polymer | 23.0 | 3 | Chemie (NA) | |||
4 | A, B | ACETATE ION | non-polymer | 59.0 | 3 | Chemie (ACT) | |||
5 | A, B, C | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate | non-polymer | 356.5 | 6 | Chemie (OLC) | |||
6 | B | (4S)-2-METHYL-2,4-PENTANEDIOL | non-polymer | 118.2 | 1 | Chemie (MPD) | |||
7 | C | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
8 | C | PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER | non-polymer | 505.2 | 1 | Chemie (ACP) | |||
9 | water | water | 18.0 | 13 | Chemie (HOH) |
Sequence modifications
A, B, C: 1 - 121 (UniProt: P0ABN1)
PDB | External Database | Details |
---|---|---|
Gly -8 | - | expression tag |
His -7 | - | expression tag |
His -6 | - | expression tag |
His -5 | - | expression tag |
His -4 | - | expression tag |
His -3 | - | expression tag |
His -2 | - | expression tag |
Glu -1 | - | expression tag |
Leu 0 | - | expression tag |
Cys 53 | Ile 54 | engineered mutation |
Leu 70 | Ile 71 | engineered mutation |
Leu 96 | Met 97 | engineered mutation |
Asp 107 | Val 108 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 42721.6 | |
Non-Polymers* | Number of molecules | 17 |
Total formula weight | 3175.0 | |
All* | Total formula weight | 45896.6 |