4UXX
Structure of delta4-DgkA with AMPPCP in 9.9 MAG
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, B, C) | DIACYLGLYCEROL KINASE | polymer | 130 | 14240.5 | 3 | UniProt (P0ABN1) Pfam (PF01219) | ESCHERICHIA COLI K-12 | DAGK, DIGLYCERIDE KINASE, DGK |
| 2 | D (A) | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) | |||
| 3 | E, N, T (A, B, C) | SODIUM ION | non-polymer | 23.0 | 3 | Chemie (NA) | |||
| 4 | F, I, M (A, B) | ACETATE ION | non-polymer | 59.0 | 3 | Chemie (ACT) | |||
| 5 | G, H, K, L, R... (A, B, C) | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate | non-polymer | 356.5 | 6 | Chemie (OLC) | |||
| 6 | J (B) | (4S)-2-METHYL-2,4-PENTANEDIOL | non-polymer | 118.2 | 1 | Chemie (MPD) | |||
| 7 | O, P (C) | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
| 8 | Q (C) | PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER | non-polymer | 505.2 | 1 | Chemie (ACP) | |||
| 9 | U, V, W (A, B, C) | water | water | 18.0 | 13 | Chemie (HOH) |
Sequence modifications
A, B, C: 1 - 121 (UniProt: P0ABN1)
| PDB | External Database | Details |
|---|---|---|
| Gly -8 | - | expression tag |
| His -7 | - | expression tag |
| His -6 | - | expression tag |
| His -5 | - | expression tag |
| His -4 | - | expression tag |
| His -3 | - | expression tag |
| His -2 | - | expression tag |
| Glu -1 | - | expression tag |
| Leu 0 | - | expression tag |
| Cys 53 | Ile 54 | engineered mutation |
| Leu 70 | Ile 71 | engineered mutation |
| Leu 96 | Met 97 | engineered mutation |
| Asp 107 | Val 108 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 42721.6 | |
| Non-Polymers* | Number of molecules | 17 |
| Total formula weight | 3175.0 | |
| All* | Total formula weight | 45896.6 |
