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4UXX

Structure of delta4-DgkA with AMPPCP in 9.9 MAG

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-B
Synchrotron siteAPS
Beamline23-ID-B
Temperature [K]100
Detector technologyCCD
Collection date2012-12-01
DetectorMARRESEARCH
Wavelength(s)1.03320, 1.28238
Spacegroup nameP 31 2 1
Unit cell lengths72.940, 72.940, 195.760
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution53.075 - 2.701
R-factor0.2212
Rwork0.219
R-free0.25770
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3ze5
RMSD bond length0.012
RMSD bond angle0.749
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX ((PHENIX.REFINE))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]53.0702.770
High resolution limit [Å]2.7002.700
Rmerge0.1200.860
Number of reflections17218
<I/σ(I)>11.91.6
Completeness [%]99.394.1
Redundancy9.15.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1LIPIDIC CUBIC PHASE5.62777-10 %(V/V) 2-METHYL-2, 4-PENTANEDIOL (MPD), 0.1 M SODIUM CHLORIDE, 0.1 M LITHIUM NITRATE, 0.1 M SODIUM CITRATE/HCL PH 5.6. CRYSTALLIZED USING THE IN MESO (LIPID CUBIC PHASE) METHOD AT 4 DEGREES CELCIUS WITH THE 9.9 MONOACYLGLYCEROL (MONOOLEIN, 9.9 MAG) AS THE HOSTING LIPID.CRYSTALS WERE SOAKED WITH 5-10 MM AMPPCP, 60 MM ZINC ACETATE BEFORE HARVESTING.

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