4UXX
Structure of delta4-DgkA with AMPPCP in 9.9 MAG
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-12-01 |
Detector | MARRESEARCH |
Wavelength(s) | 1.03320, 1.28238 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 72.940, 72.940, 195.760 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 53.075 - 2.701 |
R-factor | 0.2212 |
Rwork | 0.219 |
R-free | 0.25770 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ze5 |
RMSD bond length | 0.012 |
RMSD bond angle | 0.749 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((PHENIX.REFINE)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 53.070 | 2.770 |
High resolution limit [Å] | 2.700 | 2.700 |
Rmerge | 0.120 | 0.860 |
Number of reflections | 17218 | |
<I/σ(I)> | 11.9 | 1.6 |
Completeness [%] | 99.3 | 94.1 |
Redundancy | 9.1 | 5.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIPIDIC CUBIC PHASE | 5.6 | 277 | 7-10 %(V/V) 2-METHYL-2, 4-PENTANEDIOL (MPD), 0.1 M SODIUM CHLORIDE, 0.1 M LITHIUM NITRATE, 0.1 M SODIUM CITRATE/HCL PH 5.6. CRYSTALLIZED USING THE IN MESO (LIPID CUBIC PHASE) METHOD AT 4 DEGREES CELCIUS WITH THE 9.9 MONOACYLGLYCEROL (MONOOLEIN, 9.9 MAG) AS THE HOSTING LIPID.CRYSTALS WERE SOAKED WITH 5-10 MM AMPPCP, 60 MM ZINC ACETATE BEFORE HARVESTING. |