4UYO

Structure of delta7-DgkA in 7.9 MAG by serial femtosecond crystatallography to 2.18 angstrom resolution

Summary for 4UYO

Related4UXW 4UXX 4UXZ
DescriptorDIACYLGLYCEROL KINASE-DELTA 7, (2S)-2,3-dihydroxypropyl (7Z)-hexadec-7-enoate, (2R)-2,3-dihydroxypropyl (7Z)-hexadec-7-enoate, ... (6 entities in total)
Functional Keywordstransferase, 7.9 mag, in meso crystallization, lipid cubic phase, lipidic cubic phase, lipid mesophase, lipidic mesophase, membrane protein, microcrystals, monoacylglycerol, room temperature crystallography, serial femtosecond crystallography, x-ray free-electron laser
Biological sourceESCHERICHIA COLI K12
Total number of polymer chains6
Total molecular weight88437.6
Authors
Li, D.,Howe, N.,Other, O.,Caffrey, M. (deposition date: 2014-09-02, release date: 2015-09-30, Last modification date: 2019-05-08)
Primary citation
Li, D.,Stansfeld, P.J.,Sansom, M.S.P.,Keogh, A.,Vogeley, L.,Howe, N.,Lyons, J.A.,Aragao, D.,Fromme, P.,Fromme, R.,Basu, S.,Grotjohann, I.,Kupitz, C.,Rendek, K.,Weierstall, U.,Zatsepin, N.A.,Cherezov, V.,Liu, W.,Bandaru, S.,English, N.J.,Gati, C.,Barty, A.,Yefanov, O.,Chapman, H.N.,Diederichs, K.,Messerschmidt, M.,Boutet, S.,Williams, G.J.,Marvin Seibert, M.,Caffrey, M.
Ternary Structure Reveals Mechanism of a Membrane Diacylglycerol Kinase.
Nat.Commun., 6:10140-, 2015
PubMed: 26673816 (PDB entries with the same primary citation)
DOI: 10.1038/NCOMMS10140
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.18 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.19860 1.0% 10.5%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
Download full validation report