Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 22172 件

1SK5
DownloadVisualize
BU of 1sk5 by Molmil
The ultra-high resolution structure of d(CTTTTAAAAG)2: modulation of bending by T-A steps and its role in DNA recognition
分子名称: 5'-D(*CP*TP*TP*TP*TP*AP*AP*AP*AP*G)-3', CALCIUM ION
著者Han, G.W, Langs, D, Kopka, M.L, Dickerson, R.E.
登録日2004-03-04
公開日2005-06-21
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (0.89 Å)
主引用文献The ultra-high resolution structure of d(CTTTTAAAAG)2: modulation of bending by T-A steps and its role in DNA recognition
To be Published
6OI1
DownloadVisualize
BU of 6oi1 by Molmil
Crystal structure of human WDR5 in complex with monomethyl L-arginine
分子名称: (2S)-2-amino-5-[(N-methylcarbamimidoyl)amino]pentanoic acid, GLYCEROL, SULFATE ION, ...
著者Lorton, B.M, Harijan, R.K, Burgos, E, Bonanno, J.B, Almo, S.C, Shechter, D.
登録日2019-04-08
公開日2020-04-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献A Binary Arginine Methylation Switch on Histone H3 Arginine 2 Regulates Its Interaction with WDR5.
Biochemistry, 59, 2020
4PVU
DownloadVisualize
BU of 4pvu by Molmil
Crystal structure of the complex between PPARgamma-LBD and the R enantiomer of Mbx-102 (Metaglidasen)
分子名称: (2R)-(4-chlorophenyl)[3-(trifluoromethyl)phenoxy]ethanoic acid, Peroxisome proliferator-activated receptor gamma
著者Pochetti, G, Montanari, R, Capelli, D, Loiodice, F, Laghezza, A, Piemontese, L, Lavecchia, A.
登録日2014-03-18
公開日2015-02-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献On the metabolically active form of metaglidasen: improved synthesis and investigation of its peculiar activity on peroxisome proliferator-activated receptors and skeletal muscles.
Chemmedchem, 10, 2015
6OTW
DownloadVisualize
BU of 6otw by Molmil
Crystallographic Structure of (HbII-HbIII)-O2 from Lucina pectinata at pH 5.0
分子名称: Hemoglobin II, Hemoglobin III, PROTOPORPHYRIN IX CONTAINING FE
著者Marchany-Rivera, D, Smith, C.A, Rodriguez-Perez, J.D, Lopez-Garriga, J.
登録日2019-05-03
公開日2020-04-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.447 Å)
主引用文献Lucina pectinata oxyhemoglobin (II-III) heterodimer pH susceptibility.
J.Inorg.Biochem., 207, 2020
4X6I
DownloadVisualize
BU of 4x6i by Molmil
Development of N-(Functionalized benzoyl)-homocycloleucyl-glycinonitriles as Potent Cathepsin K Inhibitors.
分子名称: 2-amino-4-bromo-N-{1-[(cyanomethyl)carbamoyl]cyclohexyl}benzamide, Cathepsin K, SULFATE ION
著者Borisek, J, Mohar, B, Vizovisek, M, Sosnowski, P, Turk, D, Turk, B, Novic, M.
登録日2014-12-08
公開日2015-09-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Development of N-(Functionalized benzoyl)-homocycloleucyl-glycinonitriles as Potent Cathepsin K Inhibitors.
J.Med.Chem., 58, 2015
3A1R
DownloadVisualize
BU of 3a1r by Molmil
Neutron crystal structure analysis of bovine pancreatic ribonuclease A
分子名称: Ribonuclease pancreatic
著者Yagi, D, Tanaka, I, Niimura, N.
登録日2009-04-21
公開日2009-09-01
最終更新日2023-11-01
実験手法NEUTRON DIFFRACTION (1.7 Å)
主引用文献A neutron crystallographic analysis of phosphate-free ribonuclease A at 1.7 A resolution
Acta Crystallogr.,Sect.D, 65, 2009
6OTY
DownloadVisualize
BU of 6oty by Molmil
Crystallographic Structure of (HbII-HbIII)-O2 from Lucina pectinata at pH 4.0
分子名称: Hemoglobin II, Hemoglobin III, PROTOPORPHYRIN IX CONTAINING FE
著者Marchany-Rivera, D, Smith, C.A, Rodriguez-Perez, J.D, Lopez-Garriga, J.
登録日2019-05-03
公開日2020-04-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.598 Å)
主引用文献Lucina pectinata oxyhemoglobin (II-III) heterodimer pH susceptibility.
J.Inorg.Biochem., 207, 2020
6O77
DownloadVisualize
BU of 6o77 by Molmil
Structure of the TRPM8 cold receptor by single particle electron cryo-microscopy, calcium-bound state
分子名称: CALCIUM ION, CHOLESTEROL HEMISUCCINATE, Transient receptor potential cation channel subfamily M member 8
著者Diver, M.M, Cheng, Y, Julius, D.
登録日2019-03-07
公開日2019-09-18
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural insights into TRPM8 inhibition and desensitization.
Science, 365, 2019
3A4M
DownloadVisualize
BU of 3a4m by Molmil
Crystal structure of archaeal O-phosphoseryl-tRNA(Sec) kinase
分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, IODIDE ION, ...
著者Araiso, Y, Ishitani, R, Soll, D, Nureki, O.
登録日2009-07-10
公開日2009-10-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.792 Å)
主引用文献Structure of a tRNA-dependent kinase essential for selenocysteine decoding
Proc.Natl.Acad.Sci.USA, 106, 2009
3Q2X
DownloadVisualize
BU of 3q2x by Molmil
Structure of an amyloid forming peptide NKGAII (residues 27-32) from amyloid beta
分子名称: Amyloid beta A4 protein
著者Soriaga, A.B, Sawaya, M.R, Eisenberg, D.
登録日2010-12-20
公開日2011-10-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.451 Å)
主引用文献Molecular basis for amyloid-beta polymorphism.
Proc.Natl.Acad.Sci.USA, 108, 2011
2SFP
DownloadVisualize
BU of 2sfp by Molmil
ALANINE RACEMASE WITH BOUND PROPIONATE INHIBITOR
分子名称: PROPANOIC ACID, PROTEIN (ALANINE RACEMASE), PYRIDOXAL-5'-PHOSPHATE
著者Morollo, A.A, Petsko, G.A, Ringe, D.
登録日1999-02-16
公開日1999-02-24
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of a Michaelis complex analogue: propionate binds in the substrate carboxylate site of alanine racemase.
Biochemistry, 38, 1999
4X2F
DownloadVisualize
BU of 4x2f by Molmil
Selection of fragments for kinase inhibitor design: decoration is key
分子名称: 4-amino-8-(4-aminophenyl)pyrido[2,3-d]pyrimidin-5(8H)-one, SULFATE ION, TGF-beta receptor type-1
著者Czodrowski, P, Hoelzemann, G, Barnickel, G, Greiner, H, Musil, D.
登録日2014-11-26
公開日2015-10-28
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Selection of fragments for kinase inhibitor design: decoration is key.
J.Med.Chem., 58, 2015
4X2N
DownloadVisualize
BU of 4x2n by Molmil
Selection of fragments for kinase inhibitor design: decoration is key
分子名称: SULFATE ION, TGF-beta receptor type-1
著者Czodrowski, P, Hoelzemann, G, Barnickel, G, Greiner, H, Musil, D.
登録日2014-11-26
公開日2014-12-24
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Selection of fragments for kinase inhibitor design: decoration is key.
J.Med.Chem., 58, 2015
6O7W
DownloadVisualize
BU of 6o7w by Molmil
Saccharomyces cerevisiae V-ATPase Stv1-V1VO State 2
分子名称: Putative protein YPR170W-B, V-type proton ATPase subunit B, V-type proton ATPase subunit C, ...
著者Vasanthakumar, T, Bueler, S.A, Wu, D, Beilsten-Edmands, V, Robinson, C.V, Rubinstein, J.L.
登録日2019-03-08
公開日2019-04-03
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (7 Å)
主引用文献Structural comparison of the vacuolar and Golgi V-ATPases fromSaccharomyces cerevisiae.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6OQE
DownloadVisualize
BU of 6oqe by Molmil
X-ray structure of H6N6-NS1 delta(80-84) R38A K41A mutant
分子名称: Non-structural protein 1
著者Mitra, S, Kumar, D, Hu, L, Prasad, B.V.V.
登録日2019-04-26
公開日2019-07-31
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.899 Å)
主引用文献Influenza A Virus Protein NS1 Exhibits Strain-Independent Conformational Plasticity.
J.Virol., 93, 2019
2TDX
DownloadVisualize
BU of 2tdx by Molmil
DIPHTHERIA TOX REPRESSOR (C102D MUTANT) COMPLEXED WITH NICKEL
分子名称: DIPHTHERIA TOX REPRESSOR, NICKEL (II) ION
著者White, A, Ding, X, Zheng, H, Schiering, N, Ringe, D, Murphy, J.R.
登録日1998-06-22
公開日1998-10-14
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of the metal-ion-activated diphtheria toxin repressor/tox operator complex.
Nature, 394, 1998
1F0M
DownloadVisualize
BU of 1f0m by Molmil
MONOMERIC STRUCTURE OF THE HUMAN EPHB2 SAM (STERILE ALPHA MOTIF) DOMAIN
分子名称: EPHRIN TYPE-B RECEPTOR 2
著者Thanos, C.D, Faham, S, Goodwill, K.E, Cascio, D, Phillips, M, Bowie, J.U.
登録日2000-05-16
公開日2000-07-04
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Monomeric structure of the human EphB2 sterile alpha motif domain.
J.Biol.Chem., 274, 1999
6OFZ
DownloadVisualize
BU of 6ofz by Molmil
Crystal structure of human WDR5
分子名称: WD repeat-containing protein 5
著者Lorton, B.M, Harijan, R.K, Burgos, E, Bonanno, J.B, Almo, S.C, Shechter, D.
登録日2019-04-01
公開日2020-04-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献A Binary Arginine Methylation Switch on Histone H3 Arginine 2 Regulates Its Interaction with WDR5.
Biochemistry, 59, 2020
2SOB
DownloadVisualize
BU of 2sob by Molmil
SN-OB, OB-FOLD SUB-DOMAIN OF STAPHYLOCOCCAL NUCLEASE, NMR, 10 STRUCTURES
分子名称: STAPHYLOCOCCAL NUCLEASE
著者Alexandrescu, A.T, Gittis, A.G, Abeygunawardana, C, Shortle, D.
登録日1995-09-15
公開日1995-12-07
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献NMR structure of a stable "OB-fold" sub-domain isolated from staphylococcal nuclease.
J.Mol.Biol., 250, 1995
4WX4
DownloadVisualize
BU of 4wx4 by Molmil
Crystal structure of adenovirus 8 protease in complex with a nitrile inhibitor
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCINE, N-[(2-cyanopyrimidin-4-yl)methyl]-3-[2-(3,5-dichlorophenyl)-2-methylpropanoyl]-4-methoxybenzamide, ...
著者Grosche, P, Sirockin, F, Mac Sweeney, A, Ramage, P, Erbel, P, Melkko, S, Bernardi, A, Hughes, N, Ellis, D, Combrink, K, Jarousse, N, Altmann, E.
登録日2014-11-13
公開日2015-01-14
最終更新日2015-01-28
実験手法X-RAY DIFFRACTION (1.03 Å)
主引用文献Structure-based design and optimization of potent inhibitors of the adenoviral protease.
Bioorg.Med.Chem.Lett., 25, 2015
2ZXY
DownloadVisualize
BU of 2zxy by Molmil
Crystal Structure of Cytochrome c555 from Aquifex aeolicus
分子名称: Cytochrome c552, HEME C
著者Obuchi, M, Kawahara, K, Motooka, D, Nakamura, S, Yamanaka, M, Takeda, T, Uchiyama, S, Kobayashi, Y, Ohkubo, T, Sambongi, Y.
登録日2009-01-09
公開日2009-08-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Hyperstability and crystal structure of cytochrome c(555) from hyperthermophilic Aquifex aeolicus
Acta Crystallogr.,Sect.D, 65, 2009
8HEK
DownloadVisualize
BU of 8hek by Molmil
Crystal Structure of Anti-CRISPR AcrIE2
分子名称: AcrIE2
著者Koo, J, Ka, D, Bae, E.
登録日2022-11-08
公開日2023-09-20
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献Biochemical characterization of type I-E anti-CRISPR proteins, AcrIE2 and AcrIE4
Appl.Biol.Chem., 66, 2023
4WYZ
DownloadVisualize
BU of 4wyz by Molmil
The crystal structure of the A109G mutant of RNase A in complex with 3'UMP
分子名称: 3'-URIDINEMONOPHOSPHATE, Ribonuclease pancreatic
著者French, R.L, Gagne, D, Doucet, N, Simonovic, M.
登録日2014-11-18
公開日2015-11-18
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (1.449 Å)
主引用文献Perturbation of the Conformational Dynamics of an Active-Site Loop Alters Enzyme Activity.
Structure, 23, 2015
4QI4
DownloadVisualize
BU of 4qi4 by Molmil
Dehydrogenase domain of Myriococcum thermophilum cellobiose dehydrogenase, MtDH
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CADMIUM ION, ...
著者Tan, T.C, Gandini, R, Sygmund, C, Kittl, R, Haltrich, D, Ludwig, R, Hallberg, B.M, Divne, C.
登録日2014-05-30
公開日2015-07-15
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis for cellobiose dehydrogenase action during oxidative cellulose degradation.
Nat Commun, 6, 2015
4X6A
DownloadVisualize
BU of 4x6a by Molmil
Crystal structure of yeast RNA polymerase II encountering oxidative Cyclopurine DNA lesions
分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
著者Wang, L, Chong, J, Wang, D.
登録日2014-12-07
公開日2015-02-04
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (3.96 Å)
主引用文献Mechanism of RNA polymerase II bypass of oxidative cyclopurine DNA lesions.
Proc.Natl.Acad.Sci.USA, 112, 2015

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon