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PDB: 53266 results

8OQC
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BU of 8oqc by Molmil
Dirhodium tetraacetate/ribonuclease A adduct in the P3221 space group (1 h soaking)
Descriptor: CHLORIDE ION, FORMIC ACID, Ribonuclease pancreatic, ...
Authors:Loreto, D, Merlino, A, Maity, B, Ueno, T.
Deposit date:2023-04-12
Release date:2023-06-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Cross-Linked Crystals of Dirhodium Tetraacetate/RNase A Adduct Can Be Used as Heterogeneous Catalysts.
Inorg.Chem., 62, 2023
5ZUO
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BU of 5zuo by Molmil
Crystal Structure of BZ junction in diverse sequence
Descriptor: DNA (5'-D(*AP*CP*GP*GP*TP*TP*TP*AP*TP*CP*GP*CP*GP*CP*GP*CP*G)-3'), DNA (5'-D(*GP*TP*CP*GP*CP*GP*CP*GP*CP*GP*AP*TP*AP*AP*AP*CP*C)-3'), Double-stranded RNA-specific adenosine deaminase
Authors:Kim, K.K, Kim, D.
Deposit date:2018-05-08
Release date:2018-08-29
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.902 Å)
Cite:Sequence preference and structural heterogeneity of BZ junctions.
Nucleic Acids Res., 46, 2018
5L70
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BU of 5l70 by Molmil
CRYSTAL STRUCTURE OF HUMAN CARBONIC ANHYDRASE II IN COMPLEX WITH A QUINOLINE OLIGOAMIDE FOLDAMER
Descriptor: Aromatic foldamer, Carbonic anhydrase 2, GLYCEROL, ...
Authors:Vallade, M, Langlois d'Estaintot, B, Granier, T, Huc, I.
Deposit date:2016-06-01
Release date:2017-06-21
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:CRYSTAL STRUCTURE OF HUMAN CARBONIC ANHYDRASE II IN COMPLEX WITH A QUINOLINE OLIGOAMIDE FOLDAMER
To Be Published
7VJM
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BU of 7vjm by Molmil
Aca1 in complex with 19bp palindromic DNA substrate
Descriptor: DNA (5'-D(*AP*TP*TP*AP*GP*GP*CP*AP*CP*AP*TP*TP*GP*TP*GP*CP*CP*TP*AP*T)-3'), DNA (5'-D(*TP*AP*TP*AP*GP*GP*CP*AP*CP*AP*AP*TP*GP*TP*GP*CP*CP*TP*AP*A)-3'), anti-CRISPR-associated protein Aca1
Authors:Liu, Y.H, Zhang, L.S, Wu, B.X, Huang, H.D.
Deposit date:2021-09-28
Release date:2021-10-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis for anti-CRISPR repression mediated by bacterial operon proteins Aca1 and Aca2.
J.Biol.Chem., 297, 2021
8HQP
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BU of 8hqp by Molmil
Crystal structure of AbHheG mutant from Acidimicrobiia bacterium
Descriptor: AbHheG_m
Authors:Zhou, C.H, Chen, X, Han, X, Liu, W.D, Wu, Q.Q, Zhu, D.M, Ma, Y.H.
Deposit date:2022-12-13
Release date:2023-08-02
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Flipping the Substrate Creates a Highly Selective Halohydrin Dehalogenase for the Synthesis of Chiral 4-Aryl-2-oxazolidinones from Readily Available Epoxides
Acs Catalysis, 13, 2023
8EQ0
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BU of 8eq0 by Molmil
Escherichia coli pyruvate kinase G381A
Descriptor: GLYCINE, Pyruvate kinase
Authors:Donovan, K.A, Coombes, D, Dobson, R.C.J, Cooper, T.F.
Deposit date:2022-10-07
Release date:2023-01-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Beneficial mutations occurring in E. coli pyruvate kinase afford new allosteric mechanisms leading to faster resumption of growth
To Be Published
8EQ3
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BU of 8eq3 by Molmil
Escherichia coli pyruvate kinase A301T
Descriptor: IMIDAZOLE, MALONATE ION, Pyruvate kinase, ...
Authors:Donovan, K.A, Coombes, D, Dobson, R.C.J, Cooper, T.F.
Deposit date:2022-10-07
Release date:2023-01-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Beneficial mutations occurring in E. coli pyruvate kinase afford new allosteric mechanisms leading to faster resumption of growth
To Be Published
5HFK
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BU of 5hfk by Molmil
CRYSTAL STRUCTURE OF A GLUTATHIONE S-TRANSFERASE PROTEIN FROM ESCHERICHIA COLI OCh 157:H7 STR. SAKAI (ECs3186, TARGET EFI-507414) WITH BOUND GLUTATHIONE
Descriptor: Disulfide-bond oxidoreductase YfcG, GLUTATHIONE
Authors:Himmel, D.M, Toro, R, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Stead, M, Attonito, J.D, Scott Glenn, A, Chamala, S, Chowdhury, S, Lafleur, J, Evans, B, Hillerich, B, Love, J, Seidel, R.D, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI), New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2016-01-07
Release date:2016-02-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.551 Å)
Cite:CRYSTAL STRUCTURE OF A GLUTATHIONE S-TRANSFERASE PROTEIN FROM ESCHERICHIA COLI OCh 157:H7 STR. SAKAI (ECs3186, TARGET EFI-507414) WITH BOUND GLUTATHIONE
TO BE PUBLISHED
8OQG
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BU of 8oqg by Molmil
Cross-linked crystal of dirhodium tetraacetate/ribonuclease A adduct in the P3221 space group (high temperature data collection)
Descriptor: CHLORIDE ION, FORMIC ACID, Ribonuclease pancreatic, ...
Authors:Loreto, D, Merlino, A, Maity, B, Ueno, T.
Deposit date:2023-04-12
Release date:2023-06-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Cross-Linked Crystals of Dirhodium Tetraacetate/RNase A Adduct Can Be Used as Heterogeneous Catalysts.
Inorg.Chem., 62, 2023
8SK1
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BU of 8sk1 by Molmil
Bacillus anthracis HPPK in complex with bisubstrate inhibitor HP-73
Descriptor: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase, 5'-S-[(2R,4R)-1-{2-[(2-amino-7,7-dimethyl-4-oxo-3,4,7,8-tetrahydropteridine-6-carbonyl)amino]ethyl}-2-carboxypiperidin-4-yl]-5'-thioadenosine
Authors:Shaw, G.X, Tropea, J.E, Shi, G, Waugh, D.S, Ji, X.
Deposit date:2023-04-18
Release date:2024-07-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Bacillus anthracis HPPK in complex with bisubstrate inhibitor HP-73
To be published
5HIE
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BU of 5hie by Molmil
BRAF Kinase domain b3aC loop deletion mutant in complex with dabrafenib
Descriptor: Dabrafenib, Serine/threonine-protein kinase B-raf
Authors:Whalen, D.M, Foster, S.A, Ozen, A, Wongchenko, M, Yin, J, Schaefer, G, Mayfield, J, Chmielecki, J, Stephens, P, Albacker, L, Yan, Y, Song, K, Hatzivassiliou, G, Eigenbrot, C, Yu, C, Shaw, A.S, Manning, G, Skelton, N.J, Hymowitz, S.G, Malek, S.
Deposit date:2016-01-11
Release date:2016-04-06
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Activation Mechanism of Oncogenic Deletion Mutations in BRAF, EGFR, and HER2.
Cancer Cell, 29, 2016
5LIE
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BU of 5lie by Molmil
Crystal structure of Mycobacterium tuberculosis CYP126A1 in complex with imidazole
Descriptor: IMIDAZOLE, PROTOPORPHYRIN IX CONTAINING FE, Putative cytochrome P450 126
Authors:Levy, C, Munro, A.W, Leys, D.
Deposit date:2016-07-14
Release date:2016-12-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.799 Å)
Cite:Structural Characterization and Ligand/Inhibitor Identification Provide Functional Insights into the Mycobacterium tuberculosis Cytochrome P450 CYP126A1.
J. Biol. Chem., 292, 2017
8P4Z
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BU of 8p4z by Molmil
Crystal structure of the human CDK7 kinase domain in complex with LDC4297
Descriptor: 2-[(3R)-piperidin-3-yl]oxy-8-propan-2-yl-N-[(2-pyrazol-1-ylphenyl)methyl]pyrazolo[1,5-a][1,3,5]triazin-4-amine, Cyclin-dependent kinase 7, GLYCEROL, ...
Authors:Laursen, M, Caing-Carlsson, R, Houssari, R, Javadi, A, Kimbung, Y.R, Murina, V, Orozco-Rodriguez, J.M, Svensson, A, Welin, M, Logan, D, Svensson, B, Walse, B.
Deposit date:2023-05-23
Release date:2023-06-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal structure of the human CDK7 kinase domain in complex with LDC4297
To Be Published
7VFL
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BU of 7vfl by Molmil
Crystal structure of SdgB (UDP, NAG, and O-glycosylated SD peptide-binding form)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glycosyl transferase, group 1 family protein, ...
Authors:Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
Deposit date:2021-09-13
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
8EK6
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BU of 8ek6 by Molmil
UCA Y35N (unbound) Fab from CH65-CH67 lineage
Descriptor: UCA Fab heavy chain, UCA Fab light chain
Authors:Maurer, D.P, Schmidt, A.G.
Deposit date:2022-09-20
Release date:2023-01-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.954 Å)
Cite:Hierarchical sequence-affinity landscapes shape the evolution of breadth in an anti-influenza receptor binding site antibody.
Elife, 12, 2023
6LS4
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BU of 6ls4 by Molmil
A novel anti-tumor agent S-40 in complex with tubulin
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3-[(4-cyclopropylphenyl)sulfonylamino]-4-methyl-N-(pyridin-3-ylmethyl)benzamide, GLYCEROL, ...
Authors:Du, T, Lin, S, Ji, M, Xue, N, Liu, Y, Zhang, K, Lu, D, Chen, X, Xu, H.
Deposit date:2020-01-17
Release date:2021-01-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A novel orally active microtubule destabilizing agent S-40 targets the colchicine-binding site and shows potent antitumor activity.
Cancer Lett., 495, 2020
6OBY
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BU of 6oby by Molmil
The nucleotide-binding protein AF_226 in complex with ADP from Archaeoglobus fulgidus with Co found by PIXE. Based on 3KB1.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, COBALT (II) ION, Iron-sulfur cluster carrier protein
Authors:Snell, E.H, Garman, E.F, Lowe, E.D.
Deposit date:2019-03-21
Release date:2019-12-25
Last modified:2020-01-22
Method:X-RAY DIFFRACTION (2.87 Å)
Cite:High-Throughput PIXE as an Essential Quantitative Assay for Accurate Metalloprotein Structural Analysis: Development and Application.
J.Am.Chem.Soc., 142, 2020
6LT6
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BU of 6lt6 by Molmil
Crystal structure of rhesus macaque MHC class I molecule Mamu-B*05104 complexed with lysophosphatidylcholine
Descriptor: (2R)-2,3-dihydroxypropyl hexadecanoate, 1,2-ETHANEDIOL, Beta-2-microglobulin, ...
Authors:Shima, Y, Morita, D.
Deposit date:2020-01-21
Release date:2020-04-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structures of lysophospholipid-bound MHC class I molecules.
J.Biol.Chem., 295, 2020
8OQD
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BU of 8oqd by Molmil
Dirhodium tetraacetate/ribonuclease A adduct in the P3221 space group (1 h soaking)
Descriptor: CHLORIDE ION, FORMIC ACID, Ribonuclease pancreatic, ...
Authors:Loreto, D, Merlino, A, Maity, B, Ueno, T.
Deposit date:2023-04-12
Release date:2023-06-14
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Cross-Linked Crystals of Dirhodium Tetraacetate/RNase A Adduct Can Be Used as Heterogeneous Catalysts.
Inorg.Chem., 62, 2023
8OQE
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BU of 8oqe by Molmil
Dirhodium tetraacetate/ribonuclease A adduct in the P3221 space group (6 h soaking)
Descriptor: CHLORIDE ION, FORMIC ACID, Ribonuclease pancreatic, ...
Authors:Loreto, D, Merlino, A, Maity, B, Ueno, T.
Deposit date:2023-04-12
Release date:2023-06-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Cross-Linked Crystals of Dirhodium Tetraacetate/RNase A Adduct Can Be Used as Heterogeneous Catalysts.
Inorg.Chem., 62, 2023
8OQF
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BU of 8oqf by Molmil
Cross-linked crystal of Dirhodium tetraacetate/ribonuclease A adduct in the P3221 space group (low temperature data collection)
Descriptor: (mi2-acetato-O, O')-hexaaquo-dirhodium (II), CHLORIDE ION, ...
Authors:Loreto, D, Merlino, A, Maity, B, Ueno, T.
Deposit date:2023-04-12
Release date:2023-06-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Cross-Linked Crystals of Dirhodium Tetraacetate/RNase A Adduct Can Be Used as Heterogeneous Catalysts.
Inorg.Chem., 62, 2023
6U2X
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BU of 6u2x by Molmil
Structure of ALDH7A1 mutant E399G complexed with NAD
Descriptor: Alpha-aminoadipic semialdehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Tanner, J.J, Korasick, D.A, Laciak, A.R.
Deposit date:2019-08-20
Release date:2019-11-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural analysis of pathogenic mutations targeting Glu427 of ALDH7A1, the hot spot residue of pyridoxine-dependent epilepsy.
J. Inherit. Metab. Dis., 43, 2020
3V7E
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BU of 3v7e by Molmil
Crystal structure of YbxF bound to the SAM-I riboswitch aptamer
Descriptor: COBALT HEXAMMINE(III), MAGNESIUM ION, Ribosome-associated protein L7Ae-like, ...
Authors:Baird, N.J, Zhang, J, Hamma, T, Ferre-D'Amare, A.R.
Deposit date:2011-12-21
Release date:2012-03-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:YbxF and YlxQ are bacterial homologs of L7Ae and bind K-turns but not K-loops.
Rna, 18, 2012
5HS0
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BU of 5hs0 by Molmil
Computationally Designed Cyclic Tetramer ank1C4_7
Descriptor: Ankyrin domain protein ank1C4_7, GLYCEROL, SULFATE ION
Authors:McNamara, D.E, Cascio, D, Fallas, J.A, Baker, D, Yeates, T.O.
Deposit date:2016-01-24
Release date:2017-04-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Computational design of self-assembling cyclic protein homo-oligomers.
Nat Chem, 9, 2017
6UIM
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BU of 6uim by Molmil
Crystal Structure of Danio rerio Histone Deacetylase 10 in Complex with 7-{[(3-aminopropyl)amino]-2-oxoheptyl} thioacetate
Descriptor: 7-[(3-aminopropyl)amino]-1-sulfanylheptan-2-one, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Herbst-Gervasoni, C.J, Christianson, D.W.
Deposit date:2019-10-01
Release date:2019-12-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Binding ofN8-Acetylspermidine Analogues to Histone Deacetylase 10 Reveals Molecular Strategies for Blocking Polyamine Deacetylation.
Biochemistry, 58, 2019

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PDB entries from 2024-09-04

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