Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 44 results

2N2H
DownloadVisualize
BU of 2n2h by Molmil
Solution structure of Sds3 in complex with Sin3A
Descriptor: Paired amphipathic helix protein Sin3a, Sin3 histone deacetylase corepressor complex component SDS3
Authors:Clark, M, Radhakrishnan, I.
Deposit date:2015-05-08
Release date:2015-07-15
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural insights into the assembly of the histone deacetylase-associated Sin3L/Rpd3L corepressor complex.
Proc.Natl.Acad.Sci.USA, 112, 2015
6V1Y
DownloadVisualize
BU of 6v1y by Molmil
Cryo-EM Structure of the Hyperpolarization-Activated Potassium Channel KAT1: Octamer
Descriptor: (2S)-1-(nonanoyloxy)-3-(phosphonooxy)propan-2-yl tetradecanoate, (3beta,5beta,14beta,17alpha)-cholestan-3-ol, Potassium channel KAT1
Authors:Clark, M.D, Contreras, G.F, Shen, R, Perozo, E.
Deposit date:2019-11-21
Release date:2020-06-03
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Electromechanical coupling in the hyperpolarization-activated K + channel KAT1.
Nature, 583, 2020
6V1X
DownloadVisualize
BU of 6v1x by Molmil
Cryo-EM Structure of the Hyperpolarization-Activated Potassium Channel KAT1: Tetramer
Descriptor: (2S)-1-(nonanoyloxy)-3-(phosphonooxy)propan-2-yl tetradecanoate, (3beta,5beta,14beta,17alpha)-cholestan-3-ol, Potassium channel KAT1
Authors:Clark, M.D, Contreras, G.F, Shen, R, Perozo, E.
Deposit date:2019-11-21
Release date:2020-06-03
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Electromechanical coupling in the hyperpolarization-activated K + channel KAT1.
Nature, 583, 2020
6RY9
DownloadVisualize
BU of 6ry9 by Molmil
Winter flounder 1a-1 in SDS micelles
Descriptor: Pleurocidin-like prepropolypeptide
Authors:Clarke, M, Mason, A.J.
Deposit date:2019-06-10
Release date:2020-07-15
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Winter flounder 1a-1 in SDS micelles
To Be Published
6S2D
DownloadVisualize
BU of 6s2d by Molmil
Winter flounder 1 in SDS micelles
Descriptor: Pleurocidin-like prepropolypeptide
Authors:Clarke, M, Mason, A.J.
Deposit date:2019-06-20
Release date:2020-07-15
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Winter flounder 1 in SDS micelles
To Be Published
2MSL
DownloadVisualize
BU of 2msl by Molmil
Solution Structure and Chemical Shift Assignments for the Apo form of the Receiver Domain of Nitrogen Regulatory Protein C (NTRC) at 35C
Descriptor: Nitrogen regulation protein NR(I)
Authors:Clarkson, M.W, Pontiggia, F, Villali, J, Kern, D.
Deposit date:2014-08-04
Release date:2015-07-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Free energy landscape of activation in a signalling protein at atomic resolution.
Nat Commun, 6, 2015
2MSK
DownloadVisualize
BU of 2msk by Molmil
Solution Structure and Chemical Shift Assignments for BeF3 activated Receiver Domain of Nitrogen Regulatory Protein C (NtrC) at 35C
Descriptor: Nitrogen regulation protein NR(I)
Authors:Clarkson, M.W, Pontiggia, F, Villali, J, Kern, D.
Deposit date:2014-08-04
Release date:2015-07-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Free energy landscape of activation in a signalling protein at atomic resolution.
Nat Commun, 6, 2015
8C65
DownloadVisualize
BU of 8c65 by Molmil
Crystal structure of cutinase AdCut from Acidovorax delafieldii (PBS depolymerase)
Descriptor: PBS(A) depolymerase
Authors:Zahn, M, Clark, M.
Deposit date:2023-01-11
Release date:2024-01-24
Method:X-RAY DIFFRACTION (1.491 Å)
Cite:Predictions of the substrate specificities of the plastic-degrading enzymes IsPETase and AdCut
To Be Published
1YWR
DownloadVisualize
BU of 1ywr by Molmil
Crystal Structure Analysis of inactive P38 kinase domain in complex with a Monocyclic Pyrazolone Inhibitor
Descriptor: 4-(4-FLUOROPHENYL)-1-METHYL-5-(2-{[(1S)-1-PHENYLETHYL]AMINO}PYRIMIDIN-4-YL)-2-PIPERIDIN-4-YL-1,2-DIHYDRO-3H-PYRAZOL-3-ONE, Mitogen-activated protein kinase 14
Authors:Golebiowski, A, Townes, J.A, Laufersweiler, M.J, Brugel, T.A, Clark, M.P, Clark, C.M, Djung, J.F, Laughlin, S.K, Sabat, M.P, Bookland, R.G, Vanrens, J.C, De, B, Hsieh, L.C, Janusz, M.J, Walter, R.L, Webster, M.E, Mekel, M.J.
Deposit date:2005-02-18
Release date:2005-05-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The development of monocyclic pyrazolone based cytokine synthesis inhibitors.
Bioorg.Med.Chem.Lett., 15, 2005
6OBA
DownloadVisualize
BU of 6oba by Molmil
The beta2 adrenergic receptor bound to a negative allosteric modulator
Descriptor: (2S)-1-[(1-methylethyl)amino]-3-(2-prop-2-en-1-ylphenoxy)propan-2-ol, 6-bromo-N~2~-phenylquinazoline-2,4-diamine, Beta-2 adrenergic receptor,Lysozyme,Beta-2 adrenergic receptor, ...
Authors:Liu, X, Stobel, A, Kaindl, J, Dengler, D, ClarK, M, Mahoney, J, Korczynska, M, Matt, R.A, Hubner, H, Xu, X, Stanek, M, Hirata, K, Shoichet, B, Sunahara, R, Gmeiner, R, Kobilka, B.K.
Deposit date:2019-03-20
Release date:2020-03-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:An allosteric modulator binds to a conformational hub in the beta2adrenergic receptor.
Nat.Chem.Biol., 16, 2020
7XK9
DownloadVisualize
BU of 7xk9 by Molmil
Structure of human beta2 adrenergic receptor bound to constrained isoproterenol
Descriptor: (5R,6R)-6-(propan-2-ylamino)-5,6,7,8-tetrahydronaphthalene-1,2,5-triol, Camelid Antibody Fragment, Endolysin,Beta-2 adrenergic receptor, ...
Authors:Xu, X, Shonberg, J, Kaindl, J, Clark, M, Stobel, A, Maul, L, Mayer, D, Hubner, H, Venkatakrishnan, A, Dror, R, Kobilka, B.K, Sunahara, R, Liu, X, Gmeiner, P.
Deposit date:2022-04-19
Release date:2023-04-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Constrained catecholamines gain beta 2 AR selectivity through allosteric effects on pocket dynamics.
Nat Commun, 14, 2023
5ZHP
DownloadVisualize
BU of 5zhp by Molmil
M3 muscarinic acetylcholine receptor in complex with a selective antagonist
Descriptor: (1R,2R,4S,5S,7s)-7-({[4-fluoro-2-(thiophen-2-yl)phenyl]carbamoyl}oxy)-9,9-dimethyl-3-oxa-9-azatricyclo[3.3.1.0~2,4~]nonan-9-ium, CITRIC ACID, HEXAETHYLENE GLYCOL, ...
Authors:Liu, H, Hofmann, J, Fish, I, Schaake, B, Eitel, K, Bartuschat, A, Kaindl, J, Rampp, H, Banerjee, A, Hubner, H, Clark, M.J, Vincent, S.G, Fisher, J, Heinrich, M, Hirata, K, Liu, X, Sunahara, R.K, Shoichet, B.K, Kobilka, B.K, Gmeiner, P.
Deposit date:2018-03-13
Release date:2018-11-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure-guided development of selective M3 muscarinic acetylcholine receptor antagonists
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7XKA
DownloadVisualize
BU of 7xka by Molmil
Structure of human beta2 adrenergic receptor bound to constrained epinephrine
Descriptor: (5R,6R)-6-(methylamino)-5,6,7,8-tetrahydronaphthalene-1,2,5-triol, Camelid Antibody Fragment, Endolysin,Beta-2 adrenergic receptor, ...
Authors:Xu, X, Shonberg, J, Kaindl, J, Clark, M, Stobel, A, Maul, L, Mayer, D, Hubner, H, Venkatakrishnan, A, Dror, R, Kobilka, B.K, Sunahara, R, Liu, X, Gmeiner, P.
Deposit date:2022-04-19
Release date:2023-04-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Constrained catecholamines gain beta 2 AR selectivity through allosteric effects on pocket dynamics.
Nat Commun, 14, 2023
7S9E
DownloadVisualize
BU of 7s9e by Molmil
Cryo-EM Structure of dolphin Prestin: Inhibited II (Sulfate +Salicylate) state
Descriptor: 2-HYDROXYBENZOIC ACID, Prestin
Authors:Bavi, N, Clark, M.D, Contreras, G.F, Shen, R, Reddy, B.G, Milewski, W, Perozo, E.
Deposit date:2021-09-20
Release date:2021-11-03
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:The conformational cycle of prestin underlies outer-hair cell electromotility.
Nature, 600, 2021
7S8X
DownloadVisualize
BU of 7s8x by Molmil
Cryo-EM Structure of dolphin Prestin: Sensor Up (compact) state
Descriptor: Prestin
Authors:Bavi, N, Clark, M.D, Contreras, G.F, Shen, R, Reddy, B.G, Milewski, W, Perozo, E.
Deposit date:2021-09-20
Release date:2021-11-03
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:The conformational cycle of prestin underlies outer-hair cell electromotility.
Nature, 600, 2021
7S9C
DownloadVisualize
BU of 7s9c by Molmil
Cryo-EM Structure of dolphin Prestin: Sensor Down II (Expanded II) state
Descriptor: Prestin
Authors:Bavi, N, Clark, M.D, Contreras, G.F, Shen, R, Reddy, B.G, Milewski, W, Perozo, E.
Deposit date:2021-09-20
Release date:2021-11-03
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (6.7 Å)
Cite:The conformational cycle of prestin underlies outer-hair cell electromotility.
Nature, 600, 2021
7S9D
DownloadVisualize
BU of 7s9d by Molmil
Cryo-EM Structure of dolphin Prestin: Intermediate state
Descriptor: Prestin
Authors:Bavi, N, Clark, M.D, Contreras, G.F, Shen, R, Reddy, B.G, Milewski, W, Perozo, E.
Deposit date:2021-09-20
Release date:2021-11-03
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:The conformational cycle of prestin underlies outer-hair cell electromotility.
Nature, 600, 2021
7S9A
DownloadVisualize
BU of 7s9a by Molmil
Cryo-EM Structure of dolphin Prestin: Inhibited I (Chloride + Salicylate)
Descriptor: 2-HYDROXYBENZOIC ACID, Prestin
Authors:Bavi, N, Clark, M.D, Contreras, G.F, Shen, R, Reddy, B.G, Milewski, W, Perozo, E.
Deposit date:2021-09-20
Release date:2021-11-03
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:The conformational cycle of prestin underlies outer-hair cell electromotility.
Nature, 600, 2021
7S9B
DownloadVisualize
BU of 7s9b by Molmil
Cryo-EM Structure of dolphin Prestin: Sensor Down I (Expanded) state
Descriptor: Prestin
Authors:Bavi, N, Clark, M.D, Contreras, G.F, Shen, R, Reddy, B.G, Milewski, W, Perozo, E.
Deposit date:2021-09-20
Release date:2021-11-03
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:The conformational cycle of prestin underlies outer-hair cell electromotility.
Nature, 600, 2021
7BVQ
DownloadVisualize
BU of 7bvq by Molmil
Structure of human beta1 adrenergic receptor bound to carazolol
Descriptor: (2S)-1-(9H-Carbazol-4-yloxy)-3-(isopropylamino)propan-2-ol, (2S)-2,3-dihydroxypropyl (7Z)-tetradec-7-enoate, CHOLESTEROL, ...
Authors:Xu, X, Kaindl, J, Clark, M, Hubner, H, Hirata, K, Sunahara, R, Gmeiner, P, Kobilka, B.K, Liu, X.
Deposit date:2020-04-11
Release date:2020-12-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Binding pathway determines norepinephrine selectivity for the human beta 1 AR over beta 2 AR.
Cell Res., 31, 2021
7BU6
DownloadVisualize
BU of 7bu6 by Molmil
Structure of human beta1 adrenergic receptor bound to norepinephrine and nanobody 6B9
Descriptor: (2S)-2,3-dihydroxypropyl octanoate, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHOLESTEROL, ...
Authors:Xu, X, Kaindl, J, Clark, M, Hubner, H, Hirata, K, Sunahara, R, Gmeiner, P, Kobilka, B.K, Liu, X.
Deposit date:2020-04-04
Release date:2020-12-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Binding pathway determines norepinephrine selectivity for the human beta 1 AR over beta 2 AR.
Cell Res., 31, 2021
7BTS
DownloadVisualize
BU of 7bts by Molmil
Structure of human beta1 adrenergic receptor bound to epinephrine and nanobody 6B9
Descriptor: (2S)-2,3-dihydroxypropyl (7Z)-tetradec-7-enoate, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHOLESTEROL, ...
Authors:Xu, X, Kaindl, J, Clark, M, Hubner, H, Hirata, K, Sunahara, R, Gmeiner, P, Kobilka, B.K, Liu, X.
Deposit date:2020-04-02
Release date:2020-12-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.13 Å)
Cite:Binding pathway determines norepinephrine selectivity for the human beta 1 AR over beta 2 AR.
Cell Res., 31, 2021
7BU7
DownloadVisualize
BU of 7bu7 by Molmil
Structure of human beta1 adrenergic receptor bound to BI-167107 and nanobody 6B9
Descriptor: (2S)-2,3-dihydroxypropyl (7Z)-tetradec-7-enoate, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 8-[(1R)-2-{[1,1-dimethyl-2-(2-methylphenyl)ethyl]amino}-1-hydroxyethyl]-5-hydroxy-2H-1,4-benzoxazin-3(4H)-one, ...
Authors:Xu, X, Kaindl, J, Clark, M, Hubner, H, Hirata, K, Sunahara, R, Gmeiner, P, Kobilka, B.K, Liu, X.
Deposit date:2020-04-04
Release date:2020-12-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Binding pathway determines norepinephrine selectivity for the human beta 1 AR over beta 2 AR.
Cell Res., 31, 2021
4ZQA
DownloadVisualize
BU of 4zqa by Molmil
Crystal Structure of the Sds3 Dimerization Domain
Descriptor: Sin3 histone deacetylase corepressor complex component SDS3
Authors:Chan, C.W, Mondragon, A, Clark, M, Radhakrishnan, I.
Deposit date:2015-05-08
Release date:2015-07-15
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural insights into the assembly of the histone deacetylase-associated Sin3L/Rpd3L corepressor complex.
Proc.Natl.Acad.Sci.USA, 112, 2015
3HA6
DownloadVisualize
BU of 3ha6 by Molmil
Crystal structure of aurora A in complex with TPX2 and compound 10
Descriptor: N~2~-(3,4-dimethoxyphenyl)-N~4~-[2-(2-fluorophenyl)ethyl]-N~6~-quinolin-6-yl-1,3,5-triazine-2,4,6-triamine, Serine/threonine-protein kinase 6, Targeting protein for Xklp2
Authors:Zhao, B, Clark, M.A.
Deposit date:2009-05-01
Release date:2009-08-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Design, synthesis and selection of DNA-encoded small-molecule libraries.
Nat.Chem.Biol., 5, 2009

 

12>

222624

건을2024-07-17부터공개중

PDB statisticsPDBj update infoContact PDBjnumon