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PDB: 913 件

5LI0
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70S ribosome from Staphylococcus aureus
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Khusainov, I, Vicens, Q, Bochler, A, Grosse, F, Myasnikov, A, Menetret, J.F, Chicher, J, Marzi, S, Romby, P, Yusupova, G, Yusupov, M, Hashem, Y.
登録日2016-07-13
公開日2016-12-28
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure of the 70S ribosome from human pathogen Staphylococcus aureus.
Nucleic Acids Res., 44, 2016
5LWR
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Endothiapepsin in complex with a derivative of fragment 177
分子名称: 1,2-ETHANEDIOL, 4-[12-[(1-chloranyl-5,6,7-trimethyl-pyrrolo[3,4-d]pyridazin-3-ium-3-yl)methyl]-10,11-dimethyl-3,4,6,7,11-pentazatricyclo[7.3.0.0^{2,6}]dodeca-1(12),2,4,7,9-pentaen-5-yl]-1,2,5-trimethyl-pyrrole-3-carbaldehyde, ACETATE ION, ...
著者Ehrmann, F.R, Schiebel, J, Heine, A, Klebe, G.
登録日2016-09-19
公開日2017-08-09
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.249 Å)
主引用文献A False-Positive Screening Hit in Fragment-Based Lead Discovery: Watch out for the Red Herring.
Angew. Chem. Int. Ed. Engl., 56, 2017
6KNR
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BU of 6knr by Molmil
Crystal structure of Estrogen-related receptor gamma ligand-binding domain with DN200699
分子名称: (E)-4-(1-(4-(1-cyclopropylpiperidin-4-yl)phenyl)-5-hydroxy-2-phenylpent-1-en-1-yl)phenol, Estrogen-related receptor gamma
著者Yoon, H, Kim, J, Chin, J, Song, J, Cho, S.J.
登録日2019-08-07
公開日2020-08-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.804 Å)
主引用文献An orally available inverse agonist of estrogen-related receptor gamma showed expanded efficacy for the radioiodine therapy of poorly differentiated thyroid cancer.
Eur.J.Med.Chem., 205, 2020
3K6V
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BU of 3k6v by Molmil
M. acetivorans Molybdate-Binding Protein (ModA) in Citrate-Bound Open Form
分子名称: CITRIC ACID, Solute-binding protein MA_0280
著者Chan, S, Giuroiu, I, Chernishof, I, Sawaya, M.R, Chiang, J, Gunsalus, R.P, Arbing, M.A, Perry, L.J.
登録日2009-10-09
公開日2010-01-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Apo and ligand-bound structures of ModA from the archaeon Methanosarcina acetivorans
Acta Crystallogr.,Sect.F, 66, 2010
3ZUE
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BU of 3zue by Molmil
Rabbit Hemorrhagic Disease Virus (RHDV)capsid protein
分子名称: CAPSID STRUCTURAL PROTEIN VP60
著者Luque, D, Gonzalez, J.M, Gomez-Blanco, J, Marabini, R, Chichon, J, Mena, I, Angulo, I, Carrascosa, J.L, Verdaguer, N, Trus, B.L, Barcena, J, Caston, J.R.
登録日2011-07-18
公開日2012-05-23
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (10.3 Å)
主引用文献Epitope Insertion at the N-Terminal Molecular Switch of the Rabbit Hemorrhagic Disease Virus T=3 Capsid Protein Leads to Larger T=4 Capsids.
J.Virol., 86, 2012
2WDU
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BU of 2wdu by Molmil
Fasciola hepatica sigma class GST
分子名称: BROMIDE ION, DIMETHYL SULFOXIDE, GLUTATHIONE, ...
著者Line, K, Isupov, M.N, LaCourse, E.J, Brophy, P.M, Littlechild, J.A.
登録日2009-03-26
公開日2010-04-21
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献The 1.6 Angstrom Crystal Structure of the Fasciola Hepatica Sigma Class Gst
To be Published
4F1E
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BU of 4f1e by Molmil
The Crystal Structure of a Human MitoNEET mutant with Asp 67 replaced by a Gly
分子名称: CDGSH iron-sulfur domain-containing protein 1, FE2/S2 (INORGANIC) CLUSTER
著者Baxter, E.I, Zuris, J.A, Wang, C, Axelrod, H.L, Cohen, A.E, Paddock, M.L, Nechushtai, R, Onuchic, J.N, Jennings, P.A.
登録日2012-05-06
公開日2012-12-26
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Allosteric control in a metalloprotein dramatically alters function.
Proc.Natl.Acad.Sci.USA, 110, 2013
3K6W
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BU of 3k6w by Molmil
Apo and ligand bound structures of ModA from the archaeon Methanosarcina acetivorans
分子名称: MOLYBDATE ION, SULFATE ION, Solute-binding protein MA_0280
著者Chan, S, Chernishof, I, Giuroiu, I, Sawaya, M.R, Chiang, J, Gunsalus, R.P, Arbing, M.A, Perry, L.J.
登録日2009-10-09
公開日2010-01-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Apo and ligand-bound structures of ModA from the archaeon Methanosarcina acetivorans
Acta Crystallogr.,Sect.F, 66, 2010
2WB9
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BU of 2wb9 by Molmil
Fasciola hepatica sigma class GST
分子名称: BROMIDE ION, CYSTEINE, GLUTATHIONE, ...
著者Line, K, Isupov, M.N, LaCourse, J, Brophy, P.M, Littlechild, J.A.
登録日2009-02-23
公開日2010-03-31
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献The 1.6 Angstrom Crystal Structure of the Fasciola Hepatica Sigma Class Gst
To be Published
6A6K
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BU of 6a6k by Molmil
Crystal structure of Estrogen-related Receptor-3 (ERR-gamma) ligand binding domain with DN201000
分子名称: 3-[(~{E})-5-oxidanyl-2-phenyl-1-[4-(4-propan-2-ylpiperazin-1-yl)phenyl]pent-1-enyl]phenol, Estrogen-related receptor gamma
著者Yoon, H, Kim, J, Chin, J, Cho, S.J, Song, J.
登録日2018-06-28
公開日2019-04-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Discovery of Potent, Selective, and Orally Bioavailable Estrogen-Related Receptor-gamma Inverse Agonists To Restore the Sodium Iodide Symporter Function in Anaplastic Thyroid Cancer.
J. Med. Chem., 62, 2019
1P4D
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BU of 1p4d by Molmil
F factor TraI Relaxase Domain
分子名称: 1,2-ETHANEDIOL, MAGNESIUM ION, TraI protein
著者Datta, S, Larkin, C, Schildbach, J.F.
登録日2003-04-22
公開日2003-10-14
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural insights into single-stranded DNA binding and cleavage by F factor TraI.
Structure, 11, 2003
2X53
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BU of 2x53 by Molmil
Structure of the phage p2 baseplate in its activated conformation with Sr
分子名称: ORF15, ORF16, PUTATIVE RECEPTOR BINDING PROTEIN, ...
著者Sciara, G, Bebeacua, C, Bron, P, Tremblay, D, Ortiz-Lombardia, M, Lichiere, J, van Heel, M, Campanacci, V, Moineau, S, Cambillau, C.
登録日2010-02-05
公開日2010-02-16
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献Structure of Lactococcal Phage P2 Baseplate and its Mechanism of Activation.
Proc.Natl.Acad.Sci.USA, 107, 2010
1ONV
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BU of 1onv by Molmil
NMR Structure of a Complex Containing the TFIIF Subunit RAP74 and the RNAP II CTD Phosphatase FCP1
分子名称: Transcription initiation factor IIF, alpha subunit, serine phosphatase FCP1a
著者Nguyen, B.D, Abbott, K.L, Potempa, K, Kobor, M.S, Archambault, J, Greenblatt, J, Legault, P, Omichinski, J.G.
登録日2003-03-02
公開日2003-05-20
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献NMR Structure of a Complex Containing the TFIIF Subunit RAP74 and the RNA polymerase II carboxyl-terminal domain phosphatase FCP1
Proc.Natl.Acad.Sci.USA, 100, 2003
4EHK
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BU of 4ehk by Molmil
Allosteric Modulation of Caspase-3 through Mutagenesis
分子名称: ACE-ASP-GLU-VAL-ASP-CHLOROMETHYLKETONE INHIBITOR, Caspase-3
著者Walters, J, Schipper, J.L, Swartz, P.D, Mattos, C, Clark, A.C.
登録日2012-04-02
公開日2012-06-06
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (1.668 Å)
主引用文献Allosteric modulation of caspase 3 through mutagenesis.
Biosci.Rep., 32, 2012
1B7G
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BU of 1b7g by Molmil
GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE
分子名称: PROTEIN (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE), SULFATE ION
著者Isupov, M.N, Littlechild, J.A.
登録日1999-01-22
公開日1999-10-08
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal structure of the glyceraldehyde-3-phosphate dehydrogenase from the hyperthermophilic archaeon Sulfolobus solfataricus.
J.Mol.Biol., 291, 1999
6ECD
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BU of 6ecd by Molmil
Vlm2 thioesterase domain with genetically encoded 2,3-diaminopropionic acid bound with a tetradepsipeptide
分子名称: Vlm2, tetradepsipeptide
著者Alonzo, D.A, Huguenin-Dezot, N, Heberlig, G.W, Mahesh, M, Nguyen, D.P, Dornan, M.H, Boddy, C.N, Chin, J.W, Schmeing, T.M.
登録日2018-08-07
公開日2018-12-12
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Trapping biosynthetic acyl-enzyme intermediates with encoded 2,3-diaminopropionic acid.
Nature, 565, 2019
4EZF
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BU of 4ezf by Molmil
The Crystal Structure of a Human MitoNEET mutant with an Ala inserted between Asp 67 and Lys 68
分子名称: CDGSH iron-sulfur domain-containing protein 1, FE2/S2 (INORGANIC) CLUSTER
著者Baxter, E.L, Zuris, J.A, Wang, C, Axelrod, H.L, Cohen, A.E, Paddock, M.L, Nechushtai, R, Onuchic, J.N, Jennings, P.A.
登録日2012-05-02
公開日2012-12-26
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献Allosteric control in a metalloprotein dramatically alters function.
Proc.Natl.Acad.Sci.USA, 110, 2013
3U6X
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BU of 3u6x by Molmil
Phage TP901-1 baseplate tripod
分子名称: BPP, BROMIDE ION, ORF48
著者Veesler, D, Spinelli, S, Mahony, J, Lichiere, J, Blangy, S, Bricogne, G, Legrand, P, Ortiz-Lombardia, M, Campanacci, V.I, van Sinderen, D, Cambillau, C.
登録日2011-10-13
公開日2012-07-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of the phage TP901-1 1.8 MDa baseplate suggests an alternative host adhesion mechanism.
Proc.Natl.Acad.Sci.USA, 109, 2012
7ADG
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BU of 7adg by Molmil
Cocktail experiment G: fragments 216 and 338 at 90 mM concentration in complex with Endothiapepsin
分子名称: 2-(1H-imidazol-1-yl)-N-(trans-4-methylcyclohexyl)acetamide, ACETATE ION, DIMETHYL SULFOXIDE, ...
著者Hassaan, E, Klebe, G, Heine, A, Schiebel, J, Koester, H.
登録日2020-09-14
公開日2021-10-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.0794636 Å)
主引用文献Comparison of Cocktail Screening in X-Ray Crystallography vs NMR
To Be Published
7DN2
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BU of 7dn2 by Molmil
Acidic stable capsid structure of Helicobacter pylori bacteriophage KHP30
分子名称: Cement protein gp15, Major structural protein ORF14
著者Kamiya, R, Uchiyama, J, Matsuzaki, S, Murata, K, Iwasaki, K, Miyazaki, N.
登録日2020-12-08
公開日2021-10-27
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Acid-stable capsid structure of Helicobacter pylori bacteriophage KHP30 by single-particle cryoelectron microscopy.
Structure, 30, 2022
6ECE
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BU of 6ece by Molmil
Vlm2 thioesterase domain with genetically encoded 2,3-diaminopropionic acid bound with a dodecadepsipeptide, space group H3
分子名称: Vlm2, dodecadepsipeptide
著者Alonzo, D.A, Huguenin-Dezot, N, Heberlig, G.W, Mahesh, M, Nguyen, D.P, Dornan, M.H, Boddy, C.N, Chin, J.W, Schmeing, T.M.
登録日2018-08-07
公開日2018-12-12
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Trapping biosynthetic acyl-enzyme intermediates with encoded 2,3-diaminopropionic acid.
Nature, 565, 2019
1NHA
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BU of 1nha by Molmil
Solution Structure of the Carboxyl-Terminal Domain of RAP74 and NMR Characterization of the FCP-Binding Sites of RAP74 and CTD of RAP74, the subunit of Human TFIIF
分子名称: Transcription initiation factor IIF, alpha subunit
著者Nguyen, B.D, Chen, H.T, Kobor, M.S, Greenblatt, J, Legault, P, Omichinski, J.G.
登録日2002-12-19
公開日2003-02-25
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution Structure of the Carboxyl-Terminal Domain of RAP74 and NMR Characterization of the FCP1-Binding Sites of RAP74 and Human TFIIB.
Biochemistry, 42, 2003
4GAI
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BU of 4gai by Molmil
Crystal structure of EBI-005, a chimera of human IL-1beta and IL-1Ra
分子名称: EBI-005
著者Hou, J, Townson, S.A, Kovalchin, J.T, Masci, A, Kiner, O, Shu, Y, King, B, Thomas, C, Garcia, K.C, Furfine, E.S, Barnes, T.M.
登録日2012-07-25
公開日2013-02-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Design of a superior cytokine antagonist for topical ophthalmic use.
Proc.Natl.Acad.Sci.USA, 110, 2013
5Y7X
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BU of 5y7x by Molmil
Human Peroxisome proliferator-activated receptor (PPAR) delta in complexed with a potent and selective agonist
分子名称: 2-[2-methyl-4-[[4-methyl-2-[4-(trifluoromethyl)phenyl]-1,3-selenazol-5-yl]methylsulfanyl]phenoxy]ethanoic acid, CHLORIDE ION, POTASSIUM ION, ...
著者Kim, H.L, Chin, J.W, Cho, S.J, Song, J.Y, Yoon, H.S, Bae, J.H.
登録日2017-08-18
公開日2018-08-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.699 Å)
主引用文献Design, synthesis, and the X-ray co-crystal structure of Highly Potent, Selective, and Orally Bioavailable, Novel Peroxisome Proliferator-Activated Receptor delta Agonists
To Be Published
2MBH
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BU of 2mbh by Molmil
NMR structure of EKLF(22-40)/Ubiquitin Complex
分子名称: Krueppel-like factor 1, Ubiquitin
著者Raiola, L, Omichinski, J.G.
登録日2013-07-31
公開日2013-10-09
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural Characterization of a Noncovalent Complex between Ubiquitin and the Transactivation Domain of the Erythroid-Specific Factor EKLF.
Structure, 21, 2013

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