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PDB: 936 results

9K36
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Human RNA Polymerase III de novo transcribing complex 12 (TC12)
Descriptor: 3'-DEOXYADENOSINE-5'-TRIPHOSPHATE, DNA (54-MER), DNA-directed RNA polymerase III subunit RPC1, ...
Authors:Wang, Q, Ren, Y, Jin, Q, Chen, X, Xu, Y.
Deposit date:2024-10-18
Release date:2025-04-16
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:human RNA polymerase III de novo transcribing complex 12
To Be Published
9LXO
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Human RNA Polymerase III de novo transcribing complex 6 (TC6)(without 3'dATP)
Descriptor: DNA (127-MER), DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, ...
Authors:Wang, Q, Ren, Y, Jin, Q, Chen, X, Xu, Y.
Deposit date:2025-02-18
Release date:2025-04-16
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Human RNA Polymerase III de novo transcribing complex 5 (TC5)(without 3'dATP)
To Be Published
9LXN
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Human RNA Polymerase III de novo transcribing complex 5 (TC5)(without 3'dATP)
Descriptor: DNA (127-MER), DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, ...
Authors:Wang, Q, Ren, Y, Jin, Q, Chen, X, Xu, Y.
Deposit date:2025-02-18
Release date:2025-04-16
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Human RNA Polymerase III de novo transcribing complex 5 (TC5)(without 3'dATP)
To Be Published
9K3U
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Human RNA Polymerase III de novo transcribing complex 5 (TC5)
Descriptor: DNA (97-MER), DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, ...
Authors:Wang, Q, Ren, Y, Jin, Q, Chen, X, Xu, Y.
Deposit date:2024-10-20
Release date:2025-04-16
Method:ELECTRON MICROSCOPY (3 Å)
Cite:human RNA polymerase III de novo transcribing complex 4
To Be Published
9K2G
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Human RNA Polymerase III de novo transcribing complex 13 (TC13)
Descriptor: 3'-DEOXYADENOSINE-5'-TRIPHOSPHATE, DNA (104-MER), DNA-directed RNA polymerase III subunit RPC1, ...
Authors:Wang, Q, Ren, Y, Jin, Q, Chen, X, Xu, Y.
Deposit date:2024-10-17
Release date:2025-04-16
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Human RNA Polymerase III de novo transcribing complex 14 (TC14)
To Be Published
9K38
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Human RNA Polymerase III de novo transcribing complex 6 (TC6)
Descriptor: 3'-DEOXYADENOSINE-5'-TRIPHOSPHATE, DNA (51-MER), DNA-directed RNA polymerase III subunit RPC1, ...
Authors:Wang, Q, Ren, Y, Jin, Q, Chen, X, Xu, Y.
Deposit date:2024-10-18
Release date:2025-04-16
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Human RNA Polymerase III de novo transcribing complex 6 (TC6)
To Be Published
9K39
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Human RNA Polymerase III de novo transcribing complex 8 (TC8)
Descriptor: 3'-DEOXYADENOSINE-5'-TRIPHOSPHATE, DNA (50-MER), DNA-directed RNA polymerase III subunit RPC1, ...
Authors:Wang, Q, Ren, Y, Jin, Q, Chen, X, Xu, Y.
Deposit date:2024-10-18
Release date:2025-04-16
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Human RNA Polymerase III de novo transcribing complex 8 (TC8)
To Be Published
9K3V
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Human RNA Polymerase III de novo transcribing complex 4 (TC4)
Descriptor: 3'-DEOXYADENOSINE-5'-TRIPHOSPHATE, DNA (96-MER), DNA-directed RNA polymerase III subunit RPC1, ...
Authors:Wang, Q, Ren, Y, Jin, Q, Chen, X, Xu, Y.
Deposit date:2024-10-20
Release date:2025-04-16
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Human RNA Polymerase III de novo transcribing complex 4 (TC4)
To Be Published
9K3B
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Human RNA Polymerase III de novo transcribing complex 10 overall (TC10-overall)
Descriptor: 3'-DEOXYADENOSINE-5'-TRIPHOSPHATE, DNA (102-MER), DNA-directed RNA polymerase III subunit RPC1, ...
Authors:Wang, Q, Ren, Y, Jin, Q, Chen, X, Xu, Y.
Deposit date:2024-10-18
Release date:2025-04-16
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:human RNA polymerase III de novo transcribing complex 10-overall
To Be Published
7YCX
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The structure of INTAC-PEC complex
Descriptor: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB1,DNA-directed RNA polymerase II subunit RPB1, ...
Authors:Zheng, H, Jin, Q, Wang, X, Qi, Y, Liu, W, Ren, Y, Zhao, D, Chen, F.X, Cheng, J, Chen, X, Xu, Y.
Deposit date:2022-07-02
Release date:2023-03-15
Last modified:2023-09-27
Method:ELECTRON MICROSCOPY (4.18 Å)
Cite:Structural basis of INTAC-regulated transcription.
Protein Cell, 14, 2023
4GHT
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BU of 4ght by Molmil
Crystal structure of EV71 3C proteinase in complex with AG7088
Descriptor: 3C proteinase, 4-{2-(4-FLUORO-BENZYL)-6-METHYL-5-[(5-METHYL-ISOXAZOLE-3-CARBONYL)-AMINO]-4-OXO-HEPTANOYLAMINO}-5-(2-OXO-PYRROLIDIN-3-YL)-PENTANOIC ACID ETHYL ESTER
Authors:Chen, C, Wu, C, Cai, Q, Li, N, Peng, X, Cai, Y, Yin, K, Chen, X, Wang, X, Zhang, R, Liu, L, Chen, S, Li, J, Lin, T.
Deposit date:2012-08-08
Release date:2013-06-26
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structures of Enterovirus 71 3C proteinase (strain E2004104-TW-CDC) and its complex with rupintrivir
Acta Crystallogr.,Sect.D, 69, 2013
1HKA
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6-HYDROXYMETHYL-7,8-DIHYDROPTERIN PYROPHOSPHOKINASE
Descriptor: 6-HYDROXYMETHYL-7,8-DIHYDROPTERIN PYROPHOSPHOKINASE
Authors:Xiao, B, Shi, G, Chen, X, Yan, H, Ji, X.
Deposit date:1998-09-29
Release date:1999-06-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, a potential target for the development of novel antimicrobial agents.
Structure Fold.Des., 7, 1999
4GHQ
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Crystal structure of EV71 3C proteinase
Descriptor: 3C proteinase
Authors:Chen, C, Wu, C, Cai, Q, Li, N, Peng, X, Cai, Y, Yin, K, Chen, X, Wang, X, Zhang, R, Liu, L, Chen, S, Li, J, Lin, T.
Deposit date:2012-08-08
Release date:2013-06-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of Enterovirus 71 3C proteinase (strain E2004104-TW-CDC) and its complex with rupintrivir
Acta Crystallogr.,Sect.D, 69, 2013
9JVP
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BU of 9jvp by Molmil
CryoEM structure of M. tuberculosis ClpC1P1P2 complex bound to bortezomib, conformation 3
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpC1, ...
Authors:Zhou, B, Zhao, H, Gao, Y, Chen, X, Zhang, T, He, J, Xiong, X.
Deposit date:2024-10-09
Release date:2025-03-19
Method:ELECTRON MICROSCOPY (2.15 Å)
Cite:Activation mechanism of caseinolytic chaperone-protease system in Mycobacterium tuberculosis by the anti-cancer drug bortezomib
To Be Published
8Z1E
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A homotrimeric GPCR architecture of the human cytomegalovirus (UL78) revealed by cryo-EM
Descriptor: Uncharacterized protein UL78
Authors:Chen, Y, Li, Y, Zhou, Q, Cong, Z, Lin, S, Yan, J, Chen, X, Yang, D, Ying, T, Wang, M.-W.
Deposit date:2024-04-11
Release date:2024-05-15
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:A homotrimeric GPCR architecture of the human cytomegalovirus revealed by cryo-EM.
Cell Discov, 10, 2024
8XU7
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Crystal structure of Lsd18 in complex with a product
Descriptor: (4R,5S)-3-((2R,3S,4S)-2-ethyl-5-((2R,3R)-2-ethyl-3-(2-((2R,3R)-2-ethyl-3-methyloxiran-2-yl)ethyl)oxiran-2-yl)-3-hydroxy-4-methylpentanoyl)-4-methyl-5-phenyloxazolidin-2-one, CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Deng, Y.M, Chen, X.
Deposit date:2024-01-12
Release date:2025-01-15
Last modified:2025-05-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Basis of Sequential Enantioselective Epoxidation by a Flavin-Dependent Monooxygenase in Lasalocid A Biosynthesis.
Angew.Chem.Int.Ed.Engl., 2025
1WWN
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NMR Solution Structure of BmK-betaIT, an Excitatory Scorpion Toxin from Buthus martensi Karsch
Descriptor: Excitatory insect selective toxin 1
Authors:Wu, H, Tong, X, Chen, X, Zhang, Q, Zheng, X, Zhang, N, Wu, G.
Deposit date:2005-01-10
Release date:2006-01-17
Last modified:2024-10-23
Method:SOLUTION NMR
Cite:NMR solution structure of BmK-betaIT, an excitatory scorpion beta-toxin without a 'hot spot' at the relevant position
Biochem.Biophys.Res.Commun., 349, 2006
8XTZ
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Crystal structure of Lsd18 in complex with a substrate
Descriptor: (4R,5S)-4-methyl-5-phenyl-3-((2R,3S,4S,6E,10E)-2,6,10-triethyl-3-hydroxy-4-methyldodeca-6,10-dienoyl)oxazolidin-2-one, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Deng, Y.M, Hu, Y.L, Chen, X.
Deposit date:2024-01-12
Release date:2025-01-15
Last modified:2025-05-07
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural Basis of Sequential Enantioselective Epoxidation by a Flavin-Dependent Monooxygenase in Lasalocid A Biosynthesis.
Angew.Chem.Int.Ed.Engl., 2025
5GWZ
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The structure of Porcine epidemic diarrhea virus main protease in complex with an inhibitor
Descriptor: N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE, PEDV main protease
Authors:Wang, F, Chen, C, Yang, K, Liu, X, Liu, H, Xu, Y, Chen, X, Liu, X, Cai, Y, Yang, H.
Deposit date:2016-09-14
Release date:2017-03-29
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.444 Å)
Cite:Michael Acceptor-Based Peptidomimetic Inhibitor of Main Protease from Porcine Epidemic Diarrhea Virus
J. Med. Chem., 60, 2017
8YRP
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BU of 8yrp by Molmil
SARS-CoV-2 Delta Spike in complex with JM-1A
Descriptor: JM-1A Heavy Chain, JM-1A Light Chain, Spike glycoprotein
Authors:Nguyen, V.H.T, Chen, X.
Deposit date:2024-03-21
Release date:2024-06-05
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.64 Å)
Cite:The presence of broadly neutralizing anti-SARS-CoV-2 RBD antibodies elicited by primary series and booster dose of COVID-19 vaccine.
Plos Pathog., 20, 2024
8YRO
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SARS-CoV-2 Delta Spike in complex with JL-8C
Descriptor: JL-8C Heavy Chain, JL-8C Light Chain, Spike glycoprotein
Authors:Nguyen, V.H.T, Chen, X.
Deposit date:2024-03-21
Release date:2024-06-05
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (3.27 Å)
Cite:The presence of broadly neutralizing anti-SARS-CoV-2 RBD antibodies elicited by primary series and booster dose of COVID-19 vaccine.
Plos Pathog., 20, 2024
7QZQ
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Crystal structure of the kelch domain of human KBTBD12
Descriptor: 1,2-ETHANEDIOL, Kelch repeat and BTB domain-containing protein 12, SODIUM ION
Authors:Manning, C.E, Chen, Z, Chen, X, Bradshaw, W.J, Bakshi, S, Mckinley, G, Chalk, R, Burgess-Brown, N, von Delft, F, Bullock, A.N.
Deposit date:2022-01-31
Release date:2022-05-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Crystal structure of the kelch domain of human KBTBD12
To Be Published
1WT8
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Solution Structure of BmP08 from the Venom of Scorpion Buthus martensii Karsch, 20 structures
Descriptor: Neurotoxin BmK X
Authors:Wu, H, Chen, X, Tong, X, Li, Y, Zhang, N, Wu, G.
Deposit date:2004-11-17
Release date:2005-04-19
Last modified:2024-10-23
Method:SOLUTION NMR
Cite:Solution structure of BmP08, a novel short-chain scorpion toxin from Buthus martensi Karsch.
Biochem.Biophys.Res.Commun., 330, 2005
8Z98
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Cryo-EM structure of Thogoto virus polymerase in a transcription reception conformation
Descriptor: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-(2'-O-METHYL)-ADENOSINE, Polymerase acidic protein, Polymerase basic protein 2, ...
Authors:Xue, L, Chang, T, Li, Z, Zhao, H, Li, M, He, J, Chen, X, Xiong, X.
Deposit date:2024-04-22
Release date:2024-05-29
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.52 Å)
Cite:Cryo-EM structures of Thogoto virus polymerase reveal unique RNA transcription and replication mechanisms among orthomyxoviruses.
Nat Commun, 15, 2024
8Z90
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Cryo-EM structure of Thogoto virus polymerase in transcription initiation conformation 2
Descriptor: PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, Polymerase acidic protein, Polymerase basic protein 2, ...
Authors:Xue, L, Chang, T, Li, Z, Zhao, H, Li, M, He, J, Chen, X, Xiong, X.
Deposit date:2024-04-22
Release date:2024-05-29
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.87 Å)
Cite:Cryo-EM structures of Thogoto virus polymerase reveal unique RNA transcription and replication mechanisms among orthomyxoviruses.
Nat Commun, 15, 2024

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