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PDB: 437 results

8JDT
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BU of 8jdt by Molmil
Crystal structure of mLDHD in complex with 2-ketobutanoic acid
Descriptor: 2-KETOBUTYRIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, MANGANESE (II) ION, ...
Authors:Jin, S, Chen, X, Yang, J, Ding, J.
Deposit date:2023-05-15
Release date:2023-10-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Lactate dehydrogenase D is a general dehydrogenase for D-2-hydroxyacids and is associated with D-lactic acidosis.
Nat Commun, 14, 2023
8JDG
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BU of 8jdg by Molmil
Crystal structure of H405A mLDHD in complex with D-2-hydroxybutanoic acid
Descriptor: (2R)-2-oxidanylbutanoic acid, FLAVIN-ADENINE DINUCLEOTIDE, Probable D-lactate dehydrogenase, ...
Authors:Jin, S, Chen, X, Yang, J, Ding, J.
Deposit date:2023-05-14
Release date:2023-10-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Lactate dehydrogenase D is a general dehydrogenase for D-2-hydroxyacids and is associated with D-lactic acidosis.
Nat Commun, 14, 2023
8JDQ
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BU of 8jdq by Molmil
Crystal structure of H405A mLDHD in complex with D-2-hydroxyisocaproic acid
Descriptor: (2R)-2-hydroxy-4-methylpentanoic acid, FLAVIN-ADENINE DINUCLEOTIDE, Probable D-lactate dehydrogenase, ...
Authors:Jin, S, Chen, X, Yang, J, Ding, J.
Deposit date:2023-05-15
Release date:2023-10-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Lactate dehydrogenase D is a general dehydrogenase for D-2-hydroxyacids and is associated with D-lactic acidosis.
Nat Commun, 14, 2023
8JDU
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BU of 8jdu by Molmil
Crystal structure of mLDHD in complex with 2-ketovaleric acid
Descriptor: 2-oxopentanoic acid, FLAVIN-ADENINE DINUCLEOTIDE, MANGANESE (II) ION, ...
Authors:Jin, S, Chen, X, Yang, J, Ding, J.
Deposit date:2023-05-15
Release date:2023-10-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Lactate dehydrogenase D is a general dehydrogenase for D-2-hydroxyacids and is associated with D-lactic acidosis.
Nat Commun, 14, 2023
8JDN
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BU of 8jdn by Molmil
Crystal structure of H405A mLDHD in complex with D-2-hydroxyvaleric acid
Descriptor: (2R)-2-oxidanylpentanoic acid, FLAVIN-ADENINE DINUCLEOTIDE, Probable D-lactate dehydrogenase, ...
Authors:Jin, S, Chen, X, Yang, J, Ding, J.
Deposit date:2023-05-15
Release date:2023-10-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Lactate dehydrogenase D is a general dehydrogenase for D-2-hydroxyacids and is associated with D-lactic acidosis.
Nat Commun, 14, 2023
8JDX
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BU of 8jdx by Molmil
Crystal structure of mLDHD in complex with 2-ketoisovaleric acid
Descriptor: 3-METHYL-2-OXOBUTANOIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, MANGANESE (II) ION, ...
Authors:Jin, S, Chen, X, Yang, J, Ding, J.
Deposit date:2023-05-15
Release date:2023-10-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Lactate dehydrogenase D is a general dehydrogenase for D-2-hydroxyacids and is associated with D-lactic acidosis.
Nat Commun, 14, 2023
8JDC
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BU of 8jdc by Molmil
Crystal structure of mLDHD in apo form
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Probable D-lactate dehydrogenase, mitochondrial
Authors:Jin, S, Chen, X, Yang, J, Ding, J.
Deposit date:2023-05-13
Release date:2023-10-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.696 Å)
Cite:Lactate dehydrogenase D is a general dehydrogenase for D-2-hydroxyacids and is associated with D-lactic acidosis.
Nat Commun, 14, 2023
8JDO
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BU of 8jdo by Molmil
Crystal structure of H405A mLDHD in complex with D-2-hydroxyhexanoic acid
Descriptor: (2R)-2-hydroxyhexanoic acid, FLAVIN-ADENINE DINUCLEOTIDE, Probable D-lactate dehydrogenase, ...
Authors:Jin, S, Chen, X, Yang, J, Ding, J.
Deposit date:2023-05-15
Release date:2023-10-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Lactate dehydrogenase D is a general dehydrogenase for D-2-hydroxyacids and is associated with D-lactic acidosis.
Nat Commun, 14, 2023
8JDZ
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BU of 8jdz by Molmil
Crystal structure of mLDHD in complex with 2-keto-3-methylvaleric acid
Descriptor: (3S)-3-methyl-2-oxopentanoic acid, FLAVIN-ADENINE DINUCLEOTIDE, MANGANESE (II) ION, ...
Authors:Jin, S, Chen, X, Yang, J, Ding, J.
Deposit date:2023-05-15
Release date:2023-10-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Lactate dehydrogenase D is a general dehydrogenase for D-2-hydroxyacids and is associated with D-lactic acidosis.
Nat Commun, 14, 2023
8JDF
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BU of 8jdf by Molmil
Crystal structure of H405A mLDHD in complex with D-lactate
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, LACTIC ACID, Probable D-lactate dehydrogenase, ...
Authors:Jin, S, Chen, X, Yang, J, Ding, J.
Deposit date:2023-05-13
Release date:2023-10-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Lactate dehydrogenase D is a general dehydrogenase for D-2-hydroxyacids and is associated with D-lactic acidosis.
Nat Commun, 14, 2023
8JDE
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BU of 8jde by Molmil
Crystal structure of mLDHD in complex with D-lactate
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, LACTIC ACID, MANGANESE (II) ION, ...
Authors:Jin, S, Chen, X, Yang, J, Ding, J.
Deposit date:2023-05-13
Release date:2023-10-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.729 Å)
Cite:Lactate dehydrogenase D is a general dehydrogenase for D-2-hydroxyacids and is associated with D-lactic acidosis.
Nat Commun, 14, 2023
8JDV
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BU of 8jdv by Molmil
Crystal structure of mLDHD in complex with 2-ketohexanoic acid
Descriptor: 2-Ketohexanoic acid, FLAVIN-ADENINE DINUCLEOTIDE, MANGANESE (II) ION, ...
Authors:Jin, S, Chen, X, Yang, J, Ding, J.
Deposit date:2023-05-15
Release date:2023-10-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Lactate dehydrogenase D is a general dehydrogenase for D-2-hydroxyacids and is associated with D-lactic acidosis.
Nat Commun, 14, 2023
8JDS
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BU of 8jds by Molmil
Crystal structure of mLDHD in complex with Pyruvate
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, MANGANESE (II) ION, PYRUVIC ACID, ...
Authors:Jin, S, Chen, X, Yang, J, Ding, J.
Deposit date:2023-05-15
Release date:2023-10-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.636 Å)
Cite:Lactate dehydrogenase D is a general dehydrogenase for D-2-hydroxyacids and is associated with D-lactic acidosis.
Nat Commun, 14, 2023
8JDY
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BU of 8jdy by Molmil
Crystal structure of mLDHD in complex with 2-ketoisocaproic acid
Descriptor: 2-OXO-4-METHYLPENTANOIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, MANGANESE (II) ION, ...
Authors:Jin, S, Chen, X, Yang, J, Ding, J.
Deposit date:2023-05-15
Release date:2023-10-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Lactate dehydrogenase D is a general dehydrogenase for D-2-hydroxyacids and is associated with D-lactic acidosis.
Nat Commun, 14, 2023
8JDP
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BU of 8jdp by Molmil
Crystal structure of H405A mLDHD in complex with D-2-hydroxyisovaleric acid
Descriptor: DEAMINOHYDROXYVALINE, FLAVIN-ADENINE DINUCLEOTIDE, Probable D-lactate dehydrogenase, ...
Authors:Jin, S, Chen, X, Yang, J, Ding, J.
Deposit date:2023-05-15
Release date:2023-10-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Lactate dehydrogenase D is a general dehydrogenase for D-2-hydroxyacids and is associated with D-lactic acidosis.
Nat Commun, 14, 2023
8JDR
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BU of 8jdr by Molmil
Crystal structure of H405A mLDHD in complex with D-2-hydroxy-3-methyl-valeric acid
Descriptor: (2R,3S)-3-methyl-2-oxidanyl-pentanoic acid, FLAVIN-ADENINE DINUCLEOTIDE, Probable D-lactate dehydrogenase, ...
Authors:Jin, S, Chen, X, Yang, J, Ding, J.
Deposit date:2023-05-15
Release date:2023-10-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Lactate dehydrogenase D is a general dehydrogenase for D-2-hydroxyacids and is associated with D-lactic acidosis.
Nat Commun, 14, 2023
2NYT
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BU of 2nyt by Molmil
The APOBEC2 Crystal Structure and Functional Implications for AID
Descriptor: Probable C->U-editing enzyme APOBEC-2, ZINC ION
Authors:Prochnow, C, Bransteitter, R, Klein, M, Goodman, M, Chen, X.
Deposit date:2006-11-21
Release date:2007-01-09
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The APOBEC-2 crystal structure and functional implications for the deaminase AID.
Nature, 445, 2007
6BVH
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BU of 6bvh by Molmil
Trypsin complexed with a modified sunflower trypsin inhibitor, SFTI-TCTR(N12,N14)
Descriptor: CALCIUM ION, Cationic trypsin, GLYCEROL, ...
Authors:Riley, B.T, Chen, X.
Deposit date:2017-12-13
Release date:2018-12-19
Last modified:2019-01-30
Method:X-RAY DIFFRACTION (1.927 Å)
Cite:Potent, multi-target serine protease inhibition achieved by a simplified beta-sheet motif.
PLoS ONE, 14, 2019
6CKK
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BU of 6ckk by Molmil
N. meningitidis CMP-sialic acid synthetase in the presence of CTP and Ca2+
Descriptor: CALCIUM ION, CYTIDINE-5'-TRIPHOSPHATE, N-acylneuraminate cytidylyltransferase
Authors:Matthews, M.M, Fisher, A.J, Chen, X.
Deposit date:2018-02-28
Release date:2019-03-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Catalytic Cycle ofNeisseria meningitidisCMP-Sialic Acid Synthetase Illustrated by High-Resolution Protein Crystallography.
Biochemistry, 2019
6CKM
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BU of 6ckm by Molmil
N. meningitidis CMP-sialic acid synthetase in the presence of CMP-sialic acid and Ca2+
Descriptor: CALCIUM ION, CYTIDINE-5'-MONOPHOSPHATE-5-N-ACETYLNEURAMINIC ACID, GLYCEROL, ...
Authors:Matthews, M.M, Fisher, A.J, Chen, X.
Deposit date:2018-02-28
Release date:2019-03-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.543 Å)
Cite:Catalytic Cycle ofNeisseria meningitidisCMP-Sialic Acid Synthetase Illustrated by High-Resolution Protein Crystallography.
Biochemistry, 2019
6CKJ
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BU of 6ckj by Molmil
N. meningitidis CMP-sialic acid synthetase, ligand-free
Descriptor: ACETATE ION, CALCIUM ION, N-acylneuraminate cytidylyltransferase
Authors:Matthews, M.M, Fisher, A.J, Chen, X.
Deposit date:2018-02-28
Release date:2019-03-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Catalytic Cycle ofNeisseria meningitidisCMP-Sialic Acid Synthetase Illustrated by High-Resolution Protein Crystallography.
Biochemistry, 2019
6CKL
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BU of 6ckl by Molmil
N. meningitidis CMP-sialic acid synthetase in the presence of CMP and Neu5Ac2en
Descriptor: 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID, CHLORIDE ION, CITRATE ANION, ...
Authors:Matthews, M.M, Fisher, A.J, Chen, X.
Deposit date:2018-02-28
Release date:2019-03-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.684 Å)
Cite:Catalytic Cycle ofNeisseria meningitidisCMP-Sialic Acid Synthetase Illustrated by High-Resolution Protein Crystallography.
Biochemistry, 2019
6CU1
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BU of 6cu1 by Molmil
X-ray structure of the S. typhimurium YrlA effector-binding module
Descriptor: MAGNESIUM ION, SULFATE ION, YrlA effector-binding module
Authors:Wang, W, Chen, X, Wolin, S.L, Xiong, Y.
Deposit date:2018-03-23
Release date:2018-10-31
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Basis for tRNA Mimicry by a Bacterial Y RNA.
Structure, 26, 2018
6CXC
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BU of 6cxc by Molmil
3.9A Cryo-EM structure of murine antibody bound at a novel epitope of respiratory syncytial virus fusion protein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fusion glycoprotein F0, Envelope glycoprotein chimera, ...
Authors:Xie, Q, Wang, Z, Chen, X, Ni, F, Ma, J, Wang, Q.
Deposit date:2018-04-02
Release date:2019-07-31
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structure basis of neutralization by a novel site II/IV antibody against respiratory syncytial virus fusion protein.
Plos One, 14, 2019
6IZJ
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BU of 6izj by Molmil
Structural characterization of mutated NreA protein in nitrate binding site from Staphylococcus aureus
Descriptor: 1,2-ETHANEDIOL, NITRATE ION, NreA
Authors:Sangare, L, Chen, W, Wang, C, Chen, X, Wu, M, Zhang, X, Zang, J.
Deposit date:2018-12-19
Release date:2020-01-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural insights into the conformational change of Staphylococcus aureus NreA at C-terminus.
Biotechnol.Lett., 42, 2020

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