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PDB: 274 results

6BT5
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Human mGlu8 Receptor complexed with L-AP4
Descriptor: (2S)-2-amino-4-phosphonobutanoic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, Metabotropic glutamate receptor 8
Authors:Schkeryantz, J.M, Chen, Q, Ho, J.D, Atwell, S, Zhang, A, Vargas, M.C, Wang, J, Monn, J.A, Hao, J.
Deposit date:2017-12-05
Release date:2018-02-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:Determination of L-AP4-bound human mGlu8 receptor amino terminal domain structure and the molecular basis for L-AP4's group III mGlu receptor functional potency and selectivity.
Bioorg. Med. Chem. Lett., 28, 2018
5DZL
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BU of 5dzl by Molmil
Crystal structure of the protein human CEACAM1
Descriptor: Carcinoembryonic antigen-related cell adhesion molecule 1
Authors:Huang, Y.H, Russell, A, Gandhi, A.K, Kondo, Y, Chen, Q, Petsko, G.A, Blumberg, R.S.
Deposit date:2015-09-25
Release date:2015-10-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.4006 Å)
Cite:CEACAM1 regulates TIM-3-mediated tolerance and exhaustion.
Nature, 517, 2015
6C96
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BU of 6c96 by Molmil
Cryo-EM structure of mouse TPC1 channel in the apo state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, SODIUM ION, ...
Authors:She, J, Guo, J, Chen, Q, Bai, X, Jiang, Y.
Deposit date:2018-01-25
Release date:2018-04-04
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural insights into the voltage and phospholipid activation of the mammalian TPC1 channel.
Nature, 556, 2018
5E8L
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BU of 5e8l by Molmil
Crystal structure of geranylgeranyl pyrophosphate synthase 11 from Arabidopsis thaliana
Descriptor: Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic
Authors:Wang, C, Chen, Q, Fan, D, Li, J, Wang, G, Zhang, P.
Deposit date:2015-10-14
Release date:2015-11-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.807 Å)
Cite:Structural Analyses of Short-Chain Prenyltransferases Identify an Evolutionarily Conserved GFPPS Clade in Brassicaceae Plants.
Mol Plant, 9, 2016
5Y6Y
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BU of 5y6y by Molmil
The crystal structure of VrEH2 mutant M263N
Descriptor: Epoxide hydrolase
Authors:Li, F.L, Yu, H.L, Chen, Q, Kong, X.D, Zhou, J.H, Xu, J.H.
Deposit date:2017-08-15
Release date:2018-09-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Regioselectivity Engineering of Epoxide Hydrolase: Near-Perfect Enantioconvergence through a Single Site Mutation
Acs Catalysis, 8, 2018
6KY5
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BU of 6ky5 by Molmil
Crystal structure of a hydrolase mutant
Descriptor: PET hydrolase, SULFATE ION
Authors:Cui, Y.L, Chen, Y.C, Liu, X.Y, Dong, S.J, Han, J, Xiang, H, Chen, Q, Liu, H.Y, Han, X, Liu, W.D, Tang, S.Y, Wu, B.
Deposit date:2019-09-16
Release date:2020-09-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.631 Å)
Cite:Computational redesign of PETase for plasticbiodegradation by GRAPE strategy.
Biorxiv, 2020
4F8H
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BU of 4f8h by Molmil
X-ray Structure of the Anesthetic Ketamine Bound to the GLIC Pentameric Ligand-gated Ion Channel
Descriptor: (R)-ketamine, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Proton-gated ion channel, ...
Authors:Pan, J.J, Chen, Q, Willenbring, D, Kong, X.P, Cohen, A, Xu, Y, Tang, P.
Deposit date:2012-05-17
Release date:2012-08-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Structure of the Pentameric Ligand-Gated Ion Channel GLIC Bound with Anesthetic Ketamine.
Structure, 20, 2012
6K9V
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BU of 6k9v by Molmil
Crystal structure of tubulin in complex with inhibitor D64
Descriptor: (5-methoxy-1H-indol-2-yl)-phenyl-methanone, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Yu, Y, Chen, Q.
Deposit date:2019-06-18
Release date:2019-08-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.543 Å)
Cite:Structural insights into the design of indole derivatives as tubulin polymerization inhibitors.
Febs Lett., 594, 2020
7YKT
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BU of 7ykt by Molmil
Cryo-EM structure of Drg1 hexamer in helical state treated with ADP/AMPPNP/benzo-diazaborine
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATPase family gene 2 protein
Authors:Ma, C.Y, Wu, D.M, Chen, Q, Gao, N.
Deposit date:2022-07-23
Release date:2022-12-14
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (5.9 Å)
Cite:Structural dynamics of AAA + ATPase Drg1 and mechanism of benzo-diazaborine inhibition.
Nat Commun, 13, 2022
7YKZ
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Cryo-EM structure of Drg1 hexamer in the planar state treated with ADP/AMPPNP/Diazaborine
Descriptor: 2-(TOLUENE-4-SULFONYL)-2H-BENZO[D][1,2,3]DIAZABORININ-1-OL, ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Ma, C.Y, Wu, D.M, Chen, Q, Gao, N.
Deposit date:2022-07-25
Release date:2022-12-14
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structural dynamics of AAA + ATPase Drg1 and mechanism of benzo-diazaborine inhibition.
Nat Commun, 13, 2022
7YKL
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BU of 7ykl by Molmil
Cryo-EM structure of Drg1 hexamer treated with AMPPNP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ATPase family gene 2 protein
Authors:Ma, C.Y, Wu, D.M, Chen, Q, Gao, N.
Deposit date:2022-07-22
Release date:2022-12-14
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (5.6 Å)
Cite:Structural dynamics of AAA + ATPase Drg1 and mechanism of benzo-diazaborine inhibition.
Nat Commun, 13, 2022
7YKK
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BU of 7ykk by Molmil
Cryo-EM structure of Drg1 hexamer treated with ADP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ATPase family gene 2 protein
Authors:Ma, C.Y, Wu, D.M, Chen, Q, Gao, N.
Deposit date:2022-07-22
Release date:2022-12-14
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (5.9 Å)
Cite:Structural dynamics of AAA + ATPase Drg1 and mechanism of benzo-diazaborine inhibition.
Nat Commun, 13, 2022
5XHS
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BU of 5xhs by Molmil
Crystal structure of SIRT5 complexed with a fluorogenic small-molecule substrate SuBKA
Descriptor: (2S)-2-azanyl-6-[(4-hydroxy-4-oxo-butanoyl)amino]hexanoic acid, 7-AMINO-4-METHYL-CHROMEN-2-ONE, NAD-dependent protein deacylase sirtuin-5, ...
Authors:Yu, Y, Li, B, Chen, Q.
Deposit date:2017-04-24
Release date:2018-05-02
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Interactions between sirtuins and fluorogenic small-molecule substrates offer insights into inhibitor design
Rsc Adv, 7, 2017
6EDR
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BU of 6edr by Molmil
Crystal Structure of Human CD38 in Complex with 4'-Thioribose NAD+
Descriptor: ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1, [[(2~{R},3~{S},4~{R},5~{R})-5-(3-aminocarbonylpyridin-1-ium-1-yl)-3,4-bis(oxidanyl)thiolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
Authors:Dai, Z, Zhang, X.N, Nasertorabi, F, Cheng, Q, Pei, H, Louie, S.G, Stevens, C.R, Zhang, Y.
Deposit date:2018-08-10
Release date:2018-11-21
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Facile chemoenzymatic synthesis of a novel stable mimic of NAD.
Chem Sci, 9, 2018
7V6J
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BU of 7v6j by Molmil
LcCOMT in complex with SAM
Descriptor: LcCOMT, S-ADENOSYLMETHIONINE, SODIUM ION
Authors:Yu, Y, CHen, Q.
Deposit date:2021-08-20
Release date:2021-12-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.799 Å)
Cite:Structure basis of the caffeic acid O-methyltransferase from Ligusiticum chuanxiong to understand its selective mechanism.
Int.J.Biol.Macromol., 194, 2022
7V6L
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BU of 7v6l by Molmil
LcCOMT in complex with SAH
Descriptor: LcCOMT, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Yu, Y, CHen, Q.
Deposit date:2021-08-20
Release date:2021-12-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.948 Å)
Cite:Structure basis of the caffeic acid O-methyltransferase from Ligusiticum chuanxiong to understand its selective mechanism.
Int.J.Biol.Macromol., 194, 2022
6J3B
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BU of 6j3b by Molmil
Crystal structure of human DHODH in complex with inhibitor 1289
Descriptor: (6R)-1-[3,5-bis(fluoranyl)-4-[2-fluoranyl-5-(hydroxymethyl)phenyl]phenyl]-6-propan-2-yl-6,7-dihydro-5H-benzotriazol-4-one, ACETATE ION, CHLORIDE ION, ...
Authors:Yu, Y, Chen, Q.
Deposit date:2019-01-04
Release date:2019-08-21
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A novel series of human dihydroorotate dehydrogenase inhibitors discovered by in vitro screening: inhibition activity and crystallographic binding mode.
Febs Open Bio, 9, 2019
6J3C
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BU of 6j3c by Molmil
Crystal structure of human DHODH in complex with inhibitor 1291
Descriptor: (6R)-1-[4-[3-(dimethylamino)phenyl]-3,5-bis(fluoranyl)phenyl]-6-propan-2-yl-6,7-dihydro-5H-benzotriazol-4-one, Dihydroorotate dehydrogenase (quinone), mitochondrial, ...
Authors:Yu, Y, Chen, Q.
Deposit date:2019-01-04
Release date:2019-08-21
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.851 Å)
Cite:A novel series of human dihydroorotate dehydrogenase inhibitors discovered by in vitro screening: inhibition activity and crystallographic binding mode.
Febs Open Bio, 9, 2019
6JME
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BU of 6jme by Molmil
Crystal structure of human DHODH in complex with inhibitor 0946
Descriptor: 3-[3,5-bis(fluoranyl)-4-(2-fluorophenyl)phenyl]benzo[f]benzotriazole-4,9-dione, ACETATE ION, Dihydroorotate dehydrogenase (quinone), ...
Authors:Yu, Y, Chen, Q.
Deposit date:2019-03-08
Release date:2020-03-18
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Bifunctional Naphtho[2,3- d ][1,2,3]triazole-4,9-dione Compounds Exhibit Antitumor Effects In Vitro and In Vivo by Inhibiting Dihydroorotate Dehydrogenase and Inducing Reactive Oxygen Species Production.
J.Med.Chem., 63, 2020
6KYB
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BU of 6kyb by Molmil
Crystal structure of Atg18 from Saccharomyces cerevisiae
Descriptor: Autophagy-related protein 18
Authors:Tang, D, Lei, Y, Liao, G, Chen, Q, Xu, L, Lu, K, Qi, S.
Deposit date:2019-09-17
Release date:2020-09-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The crystal structure of Atg18 reveals a new binding site for Atg2 in Saccharomyces cerevisiae.
Cell.Mol.Life Sci., 78, 2021
6IEV
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BU of 6iev by Molmil
Crystal structure of a designed protein
Descriptor: Designed protein
Authors:Han, M, Liao, S, Chen, Q, Liu, H.
Deposit date:2018-09-17
Release date:2019-09-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Selection and analyses of variants of a designed protein suggest importance of hydrophobicity of partially buried sidechains for protein stability at high temperatures.
Protein Sci., 28, 2019
6JMD
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BU of 6jmd by Molmil
Crystal structure of human DHODH in complex with inhibitor 1223
Descriptor: 3-[3,5-bis(fluoranyl)-4-[3-(hydroxymethyl)phenyl]phenyl]benzo[f]benzotriazole-4,9-dione, ACETATE ION, Dihydroorotate dehydrogenase (quinone), ...
Authors:Yu, Y, Chen, Q.
Deposit date:2019-03-08
Release date:2020-03-18
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.781 Å)
Cite:Bifunctional Naphtho[2,3- d ][1,2,3]triazole-4,9-dione Compounds Exhibit Antitumor Effects In Vitro and In Vivo by Inhibiting Dihydroorotate Dehydrogenase and Inducing Reactive Oxygen Species Production.
J.Med.Chem., 63, 2020
6KYQ
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BU of 6kyq by Molmil
Crystal structure of DCLK1 Autoinhibited Kinase Domain
Descriptor: BETA-MERCAPTOETHANOL, Serine/threonine-protein kinase DCLK1
Authors:Yu, Y, Chen, Q.
Deposit date:2019-09-20
Release date:2020-09-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.141 Å)
Cite:DCLK1 Autoinhibition and Activation in Tumorigenesis
Innovation (N Y), 2021
6KYR
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BU of 6kyr by Molmil
Crystal structure of DCLK1 mutant (P675L) Autoinhibited Kinase Domain
Descriptor: BETA-MERCAPTOETHANOL, Serine/threonine-protein kinase DCLK1
Authors:Yu, Y, Chen, Q.
Deposit date:2019-09-20
Release date:2020-09-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.206 Å)
Cite:DCLK1 Autoinhibition and Activation in Tumorigenesis
Innovation (N Y), 2021
5YQN
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Crystal structure of Sirt2 in complex with selective inhibitor L55
Descriptor: DI(HYDROXYETHYL)ETHER, N-[3-[[3-[2-(4,6-dimethylpyrimidin-2-yl)sulfanylethanoylamino]phenyl]methoxy]phenyl]-1-methyl-pyrazole-4-carboxamide, NAD-dependent protein deacetylase sirtuin-2, ...
Authors:Wang, H, Yu, Y, Li, G, Chen, Q.
Deposit date:2017-11-07
Release date:2018-10-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:X-ray crystal structure guided discovery of new selective, substrate-mimicking sirtuin 2 inhibitors that exhibit activities against non-small cell lung cancer cells.
Eur J Med Chem, 155, 2018

226707

數據於2024-10-30公開中

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