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PDB: 1037 results

5WYR
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Crystal structure and catalytic mechanism of the essential m1G37 tRNA methyltransferase TrmD from Pseudomonas aeruginosa
Descriptor: SINEFUNGIN, tRNA (guanine-N(1)-)-methyltransferase
Authors:Jaroensuk, J, Liew, C.W, Atichartpongkul, S, Chionh, Y.H, Wong, Y.H, Zhong, W.H, McBee, M.E, Thongdee, N, Prestwich, E.G, DeMott, M.S, Mongkolsuk, S, Dedon, P.C, Lescar, J, Fuangthong, M.
Deposit date:2017-01-15
Release date:2017-12-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structure and catalytic mechanism of the essential m1G37 tRNA methyltransferase TrmD fromPseudomonas aeruginosa.
Rna, 2019
6YY6
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BU of 6yy6 by Molmil
Crystal structure of SAICAR Synthetase (PurC) from Mycobacterium abscessus in complex with inhibitor
Descriptor: 1,2-ETHANEDIOL, 4-azanyl-6-(1-ethylpyrazol-4-yl)pyrimidine-5-carbonitrile, Phosphoribosylaminoimidazole-succinocarboxamide synthase, ...
Authors:Thomas, S.E, Charoensutthivarakul, S, Coyne, A.G, Abell, C, Blundell, T.L.
Deposit date:2020-05-04
Release date:2021-05-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.499 Å)
Cite:Development of Inhibitors of SAICAR Synthetase (PurC) from Mycobacterium abscessus Using a Fragment-Based Approach.
Acs Infect Dis., 8, 2022
6YYC
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BU of 6yyc by Molmil
Crystal structure of SAICAR Synthetase (PurC) from Mycobacterium abscessus in complex with inhibitor
Descriptor: 1,2-ETHANEDIOL, 5-chloranyl-6-[1-[(3-fluorophenyl)methyl]pyrazol-4-yl]pyrimidin-4-amine, Phosphoribosylaminoimidazole-succinocarboxamide synthase, ...
Authors:Thomas, S.E, Charoensutthivarakul, S, Coyne, A.G, Abell, C, Blundell, T.L.
Deposit date:2020-05-04
Release date:2021-05-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.274 Å)
Cite:Development of Inhibitors of SAICAR Synthetase (PurC) from Mycobacterium abscessus Using a Fragment-Based Approach.
Acs Infect Dis., 8, 2022
6YVQ
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BU of 6yvq by Molmil
Crystal structure of SAICAR Synthetase (PurC) from Mycobacterium abscessus in apo form
Descriptor: 1,2-ETHANEDIOL, Phosphoribosylaminoimidazole-succinocarboxamide synthase, SULFATE ION
Authors:Thomas, S.E, Charoensutthivarakul, S, Coyne, A.G, Abell, C, Blundell, T.L.
Deposit date:2020-04-28
Release date:2021-05-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Development of Inhibitors of SAICAR Synthetase (PurC) from Mycobacterium abscessus Using a Fragment-Based Approach.
Acs Infect Dis., 8, 2022
6YX3
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BU of 6yx3 by Molmil
Crystal structure of SAICAR Synthetase (PurC) from Mycobacterium abscessus in complex with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Phosphoribosylaminoimidazole-succinocarboxamide synthase, ...
Authors:Thomas, S.E, Charoensutthivarakul, S, Coyne, A.G, Abell, C, Blundell, T.L.
Deposit date:2020-04-30
Release date:2021-05-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Development of Inhibitors of SAICAR Synthetase (PurC) from Mycobacterium abscessus Using a Fragment-Based Approach.
Acs Infect Dis., 8, 2022
6YY9
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BU of 6yy9 by Molmil
Crystal structure of SAICAR Synthetase (PurC) from Mycobacterium abscessus in complex with inhibitor
Descriptor: 1,2-ETHANEDIOL, 4-azanyl-6-[1-(pyridin-3-ylmethyl)pyrazol-4-yl]pyrimidine-5-carbonitrile, Phosphoribosylaminoimidazole-succinocarboxamide synthase, ...
Authors:Thomas, S.E, Charoensutthivarakul, S, Coyne, A.G, Abell, C, Blundell, T.L.
Deposit date:2020-05-04
Release date:2021-05-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.413 Å)
Cite:Development of Inhibitors of SAICAR Synthetase (PurC) from Mycobacterium abscessus Using a Fragment-Based Approach.
Acs Infect Dis., 8, 2022
6YYA
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BU of 6yya by Molmil
Crystal structure of SAICAR Synthetase (PurC) from Mycobacterium abscessus in complex with inhibitor
Descriptor: 1,2-ETHANEDIOL, 4-azanyl-6-[1-[(3-fluorophenyl)methyl]pyrazol-4-yl]pyrimidine-5-carbonitrile, Phosphoribosylaminoimidazole-succinocarboxamide synthase, ...
Authors:Thomas, S.E, Charoensutthivarakul, S, Coyne, A.G, Abell, C, Blundell, T.L.
Deposit date:2020-05-04
Release date:2021-05-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Development of Inhibitors of SAICAR Synthetase (PurC) from Mycobacterium abscessus Using a Fragment-Based Approach.
Acs Infect Dis., 8, 2022
6YY8
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BU of 6yy8 by Molmil
Crystal structure of SAICAR Synthetase (PurC) from Mycobacterium abscessus in complex with inhibitor
Descriptor: 1,2-ETHANEDIOL, 4-azanyl-6-[1-(2-morpholin-4-ylethyl)pyrazol-4-yl]pyrimidine-5-carbonitrile, Phosphoribosylaminoimidazole-succinocarboxamide synthase, ...
Authors:Thomas, S.E, Charoensutthivarakul, S, Coyne, A.G, Abell, C, Blundell, T.L.
Deposit date:2020-05-04
Release date:2021-05-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Development of Inhibitors of SAICAR Synthetase (PurC) from Mycobacterium abscessus Using a Fragment-Based Approach.
Acs Infect Dis., 8, 2022
6YYD
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BU of 6yyd by Molmil
Crystal structure of SAICAR Synthetase (PurC) from Mycobacterium abscessus in complex with inhibitor
Descriptor: 1,2-ETHANEDIOL, 4-azanyl-6-[1-[[3,4-bis(fluoranyl)phenyl]methyl]pyrazol-4-yl]pyrimidine-5-carbonitrile, Phosphoribosylaminoimidazole-succinocarboxamide synthase, ...
Authors:Thomas, S.E, Charoensutthivarakul, S, Coyne, A.G, Abell, C, Blundell, T.L.
Deposit date:2020-05-04
Release date:2021-05-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.387 Å)
Cite:Development of Inhibitors of SAICAR Synthetase (PurC) from Mycobacterium abscessus Using a Fragment-Based Approach.
Acs Infect Dis., 8, 2022
6Z0Q
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BU of 6z0q by Molmil
Crystal structure of SAICAR Synthetase (PurC) from Mycobacterium abscessus in complex with fragment 2
Descriptor: Phosphoribosylaminoimidazole-succinocarboxamide synthase, SULFATE ION, ethyl (2~{S},3~{R})-3-(5-bromanylpyridin-2-yl)-2-fluoranyl-3-oxidanyl-propanoate
Authors:Thomas, S.E, Charoensutthivarakul, S, Coyne, A.G, Abell, C, Blundell, T.L.
Deposit date:2020-05-10
Release date:2021-05-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.535 Å)
Cite:Development of Inhibitors of SAICAR Synthetase (PurC) from Mycobacterium abscessus Using a Fragment-Based Approach.
Acs Infect Dis., 8, 2022
6YY7
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BU of 6yy7 by Molmil
Crystal structure of SAICAR Synthetase (PurC) from Mycobacterium abscessus in complex with inhibitor
Descriptor: 1,2-ETHANEDIOL, Phosphoribosylaminoimidazole-succinocarboxamide synthase, SULFATE ION, ...
Authors:Thomas, S.E, Charoensutthivarakul, S, Coyne, A.G, Abell, C, Blundell, T.L.
Deposit date:2020-05-04
Release date:2021-05-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Development of Inhibitors of SAICAR Synthetase (PurC) from Mycobacterium abscessus Using a Fragment-Based Approach.
Acs Infect Dis., 8, 2022
6Z0R
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BU of 6z0r by Molmil
Crystal structure of SAICAR Synthetase (PurC) from Mycobacterium abscessus in complex with fragment 1
Descriptor: 1,2-ETHANEDIOL, 4-azanylpyrimidine-5-carbonitrile, Phosphoribosylaminoimidazole-succinocarboxamide synthase, ...
Authors:Thomas, S.E, Charoensutthivarakul, S, Coyne, A.G, Abell, C, Blundell, T.L.
Deposit date:2020-05-10
Release date:2021-05-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.308 Å)
Cite:Development of Inhibitors of SAICAR Synthetase (PurC) from Mycobacterium abscessus Using a Fragment-Based Approach.
Acs Infect Dis., 8, 2022
6YYB
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BU of 6yyb by Molmil
Crystal structure of SAICAR Synthetase (PurC) from Mycobacterium abscessus in complex with inhibitor
Descriptor: 4-azanyl-6-[1-[(1~{R})-1-phenylethyl]pyrazol-4-yl]pyrimidine-5-carbonitrile, Phosphoribosylaminoimidazole-succinocarboxamide synthase, SULFATE ION
Authors:Thomas, S.E, Charoensutthivarakul, S, Coyne, A.G, Abell, C, Blundell, T.L.
Deposit date:2020-05-04
Release date:2021-05-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Development of Inhibitors of SAICAR Synthetase (PurC) from Mycobacterium abscessus Using a Fragment-Based Approach.
Acs Infect Dis., 8, 2022
4ZPX
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BU of 4zpx by Molmil
Crystal structure of Lon ATPase domain from Thermococcus onnurineus NA1
Descriptor: ATP-dependent protease Lon, GLYCEROL
Authors:An, Y.J, Kim, M.I, Na, J.H, Cha, S.S.
Deposit date:2015-05-08
Release date:2016-05-11
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structural disparity classifies AAA+ modules of Lon proteases into two distinct clades
To Be Published
6UBT
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BU of 6ubt by Molmil
Full length Glycine receptor reconstituted in lipid nanodisc in Gly-bound desensitized conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCINE, Glycine receptor subunit alphaZ1
Authors:Kumar, A, Basak, S, Chakrapani, S.
Deposit date:2019-09-12
Release date:2020-07-29
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.55 Å)
Cite:Mechanisms of activation and desensitization of full-length glycine receptor in lipid nanodiscs.
Nat Commun, 11, 2020
6UD3
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BU of 6ud3 by Molmil
Full length Glycine receptor reconstituted in lipid nanodisc in Gly/PTX-bound open/blocked conformation
Descriptor: (1aR,2aR,3S,6R,6aS,8aS,8bR,9R)-2a-hydroxy-8b-methyl-9-(prop-1-en-2-yl)hexahydro-3,6-methano-1,5,7-trioxacyclopenta[ij]c yclopropa[a]azulene-4,8(3H)-dione, 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCINE, ...
Authors:Kumar, A, Basak, S, Chakrapani, S.
Deposit date:2019-09-18
Release date:2020-07-29
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Mechanisms of activation and desensitization of full-length glycine receptor in lipid nanodiscs.
Nat Commun, 11, 2020
8J6Y
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BU of 8j6y by Molmil
Crystal structure of class A beta-lactamase PSE-4 WT- Apo state
Descriptor: Beta-lactamase PSE-4, SULFATE ION
Authors:Sarkar, M, Bhattacharya, S, Hazra, S.
Deposit date:2023-04-26
Release date:2024-05-01
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of class A beta-lactamase PSE-4 WT- Apo state
To be published
5F1G
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BU of 5f1g by Molmil
Crystal structure of AmpC BER adenylylated in the cytoplasm
Descriptor: 1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, Beta-lactamase, ...
Authors:An, Y.J, Kim, M.K, Na, J.H, Cha, S.S.
Deposit date:2015-11-30
Release date:2016-12-07
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structural and mechanistic insights into the inhibition of class C beta-lactamases through the adenylylation of the nucleophilic serine.
J.Antimicrob.Chemother., 72, 2017
5F1F
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BU of 5f1f by Molmil
Crystal structure of CMY-10 adenylylated by acetyl-AMP
Descriptor: ADENOSINE MONOPHOSPHATE, Beta-lactamase, CADMIUM ION
Authors:An, Y.J, Kim, M.K, Na, J.H, Cha, S.S.
Deposit date:2015-11-30
Release date:2016-12-07
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.548 Å)
Cite:Structural and mechanistic insights into the inhibition of class C beta-lactamases through the adenylylation of the nucleophilic serine.
J.Antimicrob.Chemother., 72, 2017
5WLS
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BU of 5wls by Molmil
Crystal Structure of a Pollen Receptor Kinase 3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Pollen receptor-like kinase 3
Authors:Xu, G, Chakraborty, S, Pan, H.
Deposit date:2017-07-27
Release date:2018-06-06
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.496 Å)
Cite:The Extracellular Domain of Pollen Receptor Kinase 3 is structurally similar to the SERK family of co-receptors.
Sci Rep, 8, 2018
5WDK
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BU of 5wdk by Molmil
A processive dipeptidyl aminopeptidase secreted from an established commensal bacterium P. distasonis
Descriptor: 5-[(3aS,4R,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]-N-(2-oxopropyl)pentanamide, Aminopeptidase C, POTASSIUM ION
Authors:Wolan, D.W, Xu, J.H, Solania, A, Chatterjee, S, Jiang, Z, ODonoghue, A.J.
Deposit date:2017-07-05
Release date:2018-07-11
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:A Commensal Dipeptidyl Aminopeptidase with Specificity for N-Terminal Glycine Degrades Human-Produced Antimicrobial Peptides in Vitro.
Acs Chem.Biol., 13, 2018
5WDL
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BU of 5wdl by Molmil
A processive dipeptidyl aminopeptidase secreted from an established commensal bacterium P. distasonis
Descriptor: Aminopeptidase C, N-[(3S)-6-carbamimidamido-2-oxohexan-3-yl]glycinamide, POTASSIUM ION
Authors:Wolan, D.W, Xu, J.H, Solania, A, Chatterjee, S, Jiang, Z, ODonoghue, A.J.
Deposit date:2017-07-05
Release date:2018-07-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.625 Å)
Cite:A Commensal Dipeptidyl Aminopeptidase with Specificity for N-Terminal Glycine Degrades Human-Produced Antimicrobial Peptides in Vitro.
Acs Chem.Biol., 13, 2018
6LUF
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BU of 6luf by Molmil
Trans-acting mutant Y290A of the central AAA+ domain of the flagellar regulatory protein FlrC
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Flagellar regulatory protein C
Authors:Dasgupta, J, Chakraborty, S.
Deposit date:2020-01-27
Release date:2020-03-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:Oligomerization of flagellar regulatory protein FlrC is essential for cis-mediated ATP binding while c-di-GMP prefers its monomeric state
To Be Published
6LUA
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BU of 6lua by Molmil
Cis-mutant R349A of the central AAA+ domain of the flagellar regulatory protein FlrC
Descriptor: 1,2-ETHANEDIOL, Flagellar regulatory protein C
Authors:Dasgupta, J, Chakraborty, S.
Deposit date:2020-01-27
Release date:2020-03-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Oligomerization of flagellar regulatory protein FlrC is essential for cis-mediated ATP binding while c-di-GMP prefers its monomeric state
To Be Published
3L18
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BU of 3l18 by Molmil
Ton1285, an Intracellular Protease from Thermococcus onnurineus NA1
Descriptor: Intracellular protease I
Authors:Jung, H.J, Cha, S.S.
Deposit date:2009-12-11
Release date:2010-12-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structure Based Classification of the DJ-1 Superfamily: The Relationship between Homologous Structures and Various Functions
To be Published

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