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PDB: 39 results

5HJR
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BU of 5hjr by Molmil
Murine endoplasmic reticulum alpha-glucosidase II with bound covalent intermediate
Descriptor: 1,2-ETHANEDIOL, 5-fluoro-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Caputo, A.T, Roversi, P, Alonzi, D.S, Kiappes, J.L, Zitzmann, N.
Deposit date:2016-01-13
Release date:2016-07-27
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of mammalian ER alpha-glucosidase II capture the binding modes of broad-spectrum iminosugar antivirals.
Proc.Natl.Acad.Sci.USA, 113, 2016
5IEG
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BU of 5ieg by Molmil
Murine endoplasmic reticulum alpha-glucosidase II with N-9'-methoxynonyl-1-deoxynojirimycin.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, DIMETHYL SULFOXIDE, ...
Authors:Caputo, A.T, Roversi, P, Alonzi, D.S, Kiappes, J.L, Zitzmann, N.
Deposit date:2016-02-25
Release date:2016-07-27
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (1.822 Å)
Cite:Structures of mammalian ER alpha-glucosidase II capture the binding modes of broad-spectrum iminosugar antivirals.
Proc.Natl.Acad.Sci.USA, 113, 2016
6VHI
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BU of 6vhi by Molmil
Crystal structure of the human ILRUN Fw domain
Descriptor: Protein ILRUN
Authors:Caputo, A.T, Adams, T.E.
Deposit date:2020-01-09
Release date:2020-07-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Molecular characterisation of ILRUN, a novel inhibitor of proinflammatory and antimicrobial cytokines.
Heliyon, 6, 2020
7K09
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BU of 7k09 by Molmil
Puromycin N-acetyltransferase in complex with acetyl-CoA
Descriptor: ACETYL COENZYME *A, Puromycin N-acetyltransferase
Authors:Caputo, A.T, Newman, J, Adams, T.E, Peat, T.S.
Deposit date:2020-09-03
Release date:2021-03-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.313 Å)
Cite:Structure-guided selection of puromycin N-acetyltransferase mutants with enhanced selection stringency for deriving mammalian cell lines expressing recombinant proteins.
Sci Rep, 11, 2021
5IEE
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BU of 5iee by Molmil
Murine endoplasmic reticulum alpha-glucosidase II with 1-deoxynojirimycin
Descriptor: 1,2-ETHANEDIOL, 1-DEOXYNOJIRIMYCIN, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Caputo, A.T, Roversi, P, Alonzi, D.S, Kiappes, J.L, Zitzmann, N.
Deposit date:2016-02-25
Release date:2016-07-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structures of mammalian ER alpha-glucosidase II capture the binding modes of broad-spectrum iminosugar antivirals.
Proc.Natl.Acad.Sci.USA, 113, 2016
5IEF
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BU of 5ief by Molmil
Murine endoplasmic reticulum alpha-glucosidase II with N-butyl-1-deoxynojirimycin
Descriptor: (2R,3R,4R,5S)-1-BUTYL-2-(HYDROXYMETHYL)PIPERIDINE-3,4,5-TRIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
Authors:Caputo, A.T, Roversi, P, Alonzi, D.S, Kiappes, J.L, Zitzmann, N.
Deposit date:2016-02-25
Release date:2016-07-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Structures of mammalian ER alpha-glucosidase II capture the binding modes of broad-spectrum iminosugar antivirals.
Proc.Natl.Acad.Sci.USA, 113, 2016
5IED
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BU of 5ied by Molmil
Murine endoplasmic reticulum alpha-glucosidase II with castanospermine
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Caputo, A.T, Roversi, P, Alonzi, D.S, Kiappes, J.L, Zitzmann, N.
Deposit date:2016-02-25
Release date:2016-07-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structures of mammalian ER alpha-glucosidase II capture the binding modes of broad-spectrum iminosugar antivirals.
Proc.Natl.Acad.Sci.USA, 113, 2016
5H9O
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BU of 5h9o by Molmil
Complex of Murine endoplasmic reticulum alpha-glucosidase II with D-Glucose
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Caputo, A.T, Roversi, P, Alonzi, D.S, Kiappes, J.L, Zitzmann, N.
Deposit date:2015-12-29
Release date:2016-07-27
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Structures of mammalian ER alpha-glucosidase II capture the binding modes of broad-spectrum iminosugar antivirals.
Proc.Natl.Acad.Sci.USA, 113, 2016
5HJO
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BU of 5hjo by Molmil
Murine endoplasmic reticulum alpha-glucosidase II with bound substrate analogue
Descriptor: 1,2-ETHANEDIOL, 2-deoxy-alpha-D-arabino-hexopyranose-(1-3)-D-glucal, ACETATE ION, ...
Authors:Caputo, A.T, Roversi, P, Alonzi, D.S, Kiappes, J.L, Zitzmann, N.
Deposit date:2016-01-13
Release date:2016-07-27
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structures of mammalian ER alpha-glucosidase II capture the binding modes of broad-spectrum iminosugar antivirals.
Proc.Natl.Acad.Sci.USA, 113, 2016
5F0E
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BU of 5f0e by Molmil
Murine endoplasmic reticulum alpha-glucosidase II
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Caputo, A.T, Roversi, P, Alonzi, D.S, Kiappes, J.L, Zitzmann, N.
Deposit date:2015-11-27
Release date:2016-07-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Structures of mammalian ER alpha-glucosidase II capture the binding modes of broad-spectrum iminosugar antivirals.
Proc.Natl.Acad.Sci.USA, 113, 2016
7SWU
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BU of 7swu by Molmil
Crystal structure of the chromoprotein spisPINK
Descriptor: Chromoprotein spisPINK
Authors:Caputo, A.T, Newman, J, Scott, C, Ahmed, H.
Deposit date:2021-11-21
Release date:2022-04-20
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (1.444 Å)
Cite:Over the rainbow: structural characterization of the chromoproteins gfasPurple, amilCP, spisPink and eforRed.
Acta Crystallogr D Struct Biol, 78, 2022
7SWT
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BU of 7swt by Molmil
Crystal structure of the chromoprotein eforRED
Descriptor: Chromoprotein eforRED
Authors:Caputo, A.T, Newman, J, Scott, C, Ahmed, H.
Deposit date:2021-11-21
Release date:2022-04-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.005 Å)
Cite:Over the rainbow: structural characterization of the chromoproteins gfasPurple, amilCP, spisPink and eforRed.
Acta Crystallogr D Struct Biol, 78, 2022
7SWS
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BU of 7sws by Molmil
Crystal structure of the chromoprotein amilCP
Descriptor: BROMIDE ION, CHLORIDE ION, Chromoprotein amilCP
Authors:Caputo, A.T, Newman, J, Scott, C, Ahmed, H.
Deposit date:2021-11-21
Release date:2022-04-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.642 Å)
Cite:Over the rainbow: structural characterization of the chromoproteins gfasPurple, amilCP, spisPink and eforRed.
Acta Crystallogr D Struct Biol, 78, 2022
7SWR
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BU of 7swr by Molmil
Crystal structure of the chromoprotein gfasPurple
Descriptor: CHLORIDE ION, Chromoprotein gfasPurple
Authors:Caputo, A.T, Newman, J, Peat, T.S, Scott, C, Ahmed, H.
Deposit date:2021-11-21
Release date:2022-04-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.388 Å)
Cite:Over the rainbow: structural characterization of the chromoproteins gfasPurple, amilCP, spisPink and eforRed.
Acta Crystallogr D Struct Biol, 78, 2022
5NV4
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BU of 5nv4 by Molmil
UDP-Glucose Glycoprotein Glucosyltransferase from Chaetomium thermophilum double mutant D611C:G1050C
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, FORMIC ACID, UDP-glucose-glycoprotein glucosyltransferase-like protein, ...
Authors:Roversi, P, Caputo, A.T, Hill, J, Alonzi, D.S, Zitzmann, N.
Deposit date:2017-05-03
Release date:2017-07-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Interdomain conformational flexibility underpins the activity of UGGT, the eukaryotic glycoprotein secretion checkpoint.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
7K0A
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BU of 7k0a by Molmil
Puromycin N-acetyltransferase in complex with acetylated puromycin and CoA
Descriptor: 1,2-ETHANEDIOL, COENZYME A, DI(HYDROXYETHYL)ETHER, ...
Authors:Peat, T.S, Caputo, A.T, Newman, J, Adams, T.E.
Deposit date:2020-09-03
Release date:2021-03-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-guided selection of puromycin N-acetyltransferase mutants with enhanced selection stringency for deriving mammalian cell lines expressing recombinant proteins.
Sci Rep, 11, 2021
8CRU
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BU of 8cru by Molmil
PETase Ancestral Sequence Reconstruction 008
Descriptor: CITRIC ACID, Poly(ethylene terephthalate) hydrolase
Authors:Joho, Y, Royan, S, Caputo, A.T, Ardevol Grau, A, Jackson, C.
Deposit date:2022-05-11
Release date:2022-09-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Ancestral Sequence Reconstruction Identifies Structural Changes Underlying the Evolution of Ideonella sakaiensis PETase and Variants with Improved Stability and Activity.
Biochemistry, 62, 2023
5N2J
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BU of 5n2j by Molmil
UDP-Glucose Glycoprotein Glucosyltransferase from Chaetomium thermophilum (closed form)
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Roversi, P, Caputo, A.T, Hill, J, Alonzi, D.S, Zitzmann, N.
Deposit date:2017-02-07
Release date:2017-07-26
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (4.4 Å)
Cite:Interdomain conformational flexibility underpins the activity of UGGT, the eukaryotic glycoprotein secretion checkpoint.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5MZO
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BU of 5mzo by Molmil
UDP-Glucose Glycoprotein Glucosyltransferase from Chaetomium thermophilum (open conformation)
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Roversi, P, Caputo, A.T, Hill, J, Alonzi, D.S, Zitzmann, N.
Deposit date:2017-02-01
Release date:2017-07-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.48 Å)
Cite:Interdomain conformational flexibility underpins the activity of UGGT, the eukaryotic glycoprotein secretion checkpoint.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5MU1
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BU of 5mu1 by Molmil
UDP-Glucose Glycoprotein Glucosyltransferase from Chaetomium thermophilum soaked with K2PtI6
Descriptor: CALCIUM ION, IODIDE ION, PLATINUM (II) ION, ...
Authors:Roversi, P, Caputo, A.T, Hill, J, Alonzi, D.S, Zitzmann, N.
Deposit date:2017-01-11
Release date:2017-07-26
Last modified:2023-03-08
Method:X-RAY DIFFRACTION (3.48 Å)
Cite:Interdomain conformational flexibility underpins the activity of UGGT, the eukaryotic glycoprotein secretion checkpoint.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
8VEK
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BU of 8vek by Molmil
IsPETase - ACC mutant
Descriptor: GLYCEROL, Poly(ethylene terephthalate) hydrolase, SULFATE ION
Authors:Joho, Y, Royan, S, Newton, S, Caputo, A.T, Ardevol Grau, A, Jackson, C.
Deposit date:2023-12-19
Release date:2024-06-19
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Enhancing PET Degrading Enzymes: A Combinatory Approach.
Chembiochem, 25, 2024
8VE9
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BU of 8ve9 by Molmil
IsPETase - ACCCETN mutant - CombiPETase
Descriptor: CHLORIDE ION, GLYCEROL, Poly(ethylene terephthalate) hydrolase
Authors:Joho, Y, Royan, S, Newton, S, Caputo, A.T, Ardevol Grau, A, Jackson, C.
Deposit date:2023-12-18
Release date:2024-06-19
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Enhancing PET Degrading Enzymes: A Combinatory Approach.
Chembiochem, 25, 2024
8VEM
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BU of 8vem by Molmil
IsPETase - ACCE mutant
Descriptor: Poly(ethylene terephthalate) hydrolase, SULFATE ION
Authors:Joho, Y, Royan, S, Newton, S, Caputo, A.T, Ardevol Grau, A, Jackson, C.
Deposit date:2023-12-19
Release date:2024-06-19
Method:X-RAY DIFFRACTION (1.711 Å)
Cite:Enhancing PET Degrading Enzymes: A Combinatory Approach.
Chembiochem, 25, 2024
8VEL
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BU of 8vel by Molmil
IsPETase - ACCCC mutant
Descriptor: Poly(ethylene terephthalate) hydrolase, SULFATE ION
Authors:Joho, Y, Royan, S, Newton, S, Caputo, A.T, Ardevol Grau, A, Jackson, C.
Deposit date:2023-12-19
Release date:2024-06-19
Method:X-RAY DIFFRACTION (1.624 Å)
Cite:Enhancing PET Degrading Enzymes: A Combinatory Approach.
Chembiochem, 25, 2024
5MHF
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BU of 5mhf by Molmil
Murine endoplasmic reticulum alpha-glucosidase I with N-9'-methoxynonyl-1-deoxynojirimycin.
Descriptor: 2,5,8,11,14,17,20,23-OCTAOXAPENTACOSAN-25-OL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Mannosyl-oligosaccharide glucosidase, ...
Authors:Hill, J.C, Caputo, A.T, Roversi, P, Zitzmann, N.
Deposit date:2016-11-24
Release date:2017-12-20
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Targeting Endoplasmic Reticulum alpha-Glucosidase I with a Single-Dose Iminosugar Treatment Protects against Lethal Influenza and Dengue Virus Infections.
J.Med.Chem., 2020

 

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PDB entries from 2024-07-17

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