Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 2176 results

5JIX
DownloadVisualize
BU of 5jix by Molmil
PKG II's Carboxyl Terminal Cyclic Nucleotide Binding Domain (CNB-B) in a complex with 8-Br-cGMP
Descriptor: 1,2-ETHANEDIOL, 2-amino-8-bromo-9-[(2R,4aR,6R,7R,7aS)-2,7-dihydroxy-2-oxotetrahydro-2H,4H-2lambda~5~-furo[3,2-d][1,3,2]dioxaphosphinin-6-yl]-1,9-dihydro-6H-purin-6-one, 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, ...
Authors:Campbell, J.C, Kim, C.W.
Deposit date:2016-04-22
Release date:2017-05-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Structural Basis of Analog Specificity in PKG I and II.
ACS Chem. Biol., 12, 2017
5JAX
DownloadVisualize
BU of 5jax by Molmil
PKG I's Carboyl Terminal Cyclic Nucleotide Binding Domain (CNB-B) in a complex with 8-Br-cGMP
Descriptor: 2-amino-8-bromo-9-[(2R,4aR,6R,7R,7aS)-2,7-dihydroxy-2-oxotetrahydro-2H,4H-2lambda~5~-furo[3,2-d][1,3,2]dioxaphosphinin-6-yl]-1,9-dihydro-6H-purin-6-one, CALCIUM ION, SODIUM ION, ...
Authors:Campbell, J.C, Sankaran, B, Kim, C.W.
Deposit date:2016-04-12
Release date:2017-04-19
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.486 Å)
Cite:Structural Basis of Analog Specificity in PKG I and II.
ACS Chem. Biol., 12, 2017
5JD7
DownloadVisualize
BU of 5jd7 by Molmil
PKG I's Carboxyl Terminal Cyclic Nucleotide Binding Domain (CNB-B) in a complex with PET-cGMP
Descriptor: 3-[(2S,4aR,6R,7R,7aS)-2,7-dihydroxy-2-oxotetrahydro-2H,4H-2lambda~5~-furo[3,2-d][1,3,2]dioxaphosphinin-6-yl]-6-phenyl-3,4-dihydro-9H-imidazo[1,2-a]purin-9-one, cGMP-dependent protein kinase 1
Authors:Campbell, J.C, Sankaran, B, Kim, C.W.
Deposit date:2016-04-15
Release date:2017-08-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.749 Å)
Cite:Structural Basis of Analog Specificity in PKG I and II.
ACS Chem. Biol., 12, 2017
1KOZ
DownloadVisualize
BU of 1koz by Molmil
SOLUTION STRUCTURE OF OMEGA-GRAMMOTOXIN SIA
Descriptor: Voltage-dependent Channel Inhibitor
Authors:Takeuchi, K, Park, E.J, Lee, C.W, Kim, J.I, Takahashi, H, Swartz, K.J, Shimada, I.
Deposit date:2001-12-25
Release date:2002-08-28
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution structure of omega-grammotoxin SIA, a gating modifier of P/Q and N-type Ca(2+) channel.
J.Mol.Biol., 321, 2002
6Q7P
DownloadVisualize
BU of 6q7p by Molmil
Crystal structure of OE1.2
Descriptor: 1,2-ETHANEDIOL, 1-PHENYLETHANONE, MAGNESIUM ION, ...
Authors:Levy, C.W.
Deposit date:2018-12-13
Release date:2019-06-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Design and evolution of an enzyme with a non-canonical organocatalytic mechanism.
Nature, 570, 2019
6Q7R
DownloadVisualize
BU of 6q7r by Molmil
Crystal structure of OE1.3 alkylated with the mechanistic inhibitor 2-bromoacetophenone
Descriptor: 1-PHENYLETHANONE, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Levy, C.W.
Deposit date:2018-12-13
Release date:2019-06-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Design and evolution of an enzyme with a non-canonical organocatalytic mechanism.
Nature, 570, 2019
6Q7O
DownloadVisualize
BU of 6q7o by Molmil
Crystal structure of OE1
Descriptor: CALCIUM ION, OE1
Authors:Levy, C.W.
Deposit date:2018-12-13
Release date:2019-06-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Design and evolution of an enzyme with a non-canonical organocatalytic mechanism.
Nature, 570, 2019
6Q7N
DownloadVisualize
BU of 6q7n by Molmil
Crystal structure of BH32 alkylated with the mechanistic inhibitor 2-bromoacetophenone
Descriptor: 1-PHENYLETHANONE, BH32
Authors:Levy, C.W.
Deposit date:2018-12-13
Release date:2019-06-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Design and evolution of an enzyme with a non-canonical organocatalytic mechanism.
Nature, 570, 2019
6Q7Q
DownloadVisualize
BU of 6q7q by Molmil
Crystal structure of OE1.3
Descriptor: OE1.3
Authors:Levy, C.W.
Deposit date:2018-12-13
Release date:2019-06-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Design and evolution of an enzyme with a non-canonical organocatalytic mechanism.
Nature, 570, 2019
7JIH
DownloadVisualize
BU of 7jih by Molmil
HRAS A59E GppNHp
Descriptor: GLYCEROL, GTPase HRas, MAGNESIUM ION, ...
Authors:Johnson, C.W, Haigis, K.M.
Deposit date:2020-07-23
Release date:2022-03-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.989 Å)
Cite:Regulation of GTPase function by autophosphorylation.
Mol.Cell, 82, 2022
6GKZ
DownloadVisualize
BU of 6gkz by Molmil
Crystal structure of Coclaurine N-Methyltransferase (CNMT) bound to N-methylheliamine and SAH
Descriptor: Coclaurine N-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Dunstan, M.S, Levy, C.W.
Deposit date:2018-05-22
Release date:2019-01-16
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Structure and Biocatalytic Scope of Coclaurine N-Methyltransferase.
Angew. Chem. Int. Ed. Engl., 57, 2018
5BV6
DownloadVisualize
BU of 5bv6 by Molmil
PKG II's Carboxyl Terminal Cyclic Nucleotide Binding Domain (CNB-B) in a complex with cGMP
Descriptor: ACETATE ION, CALCIUM ION, GUANOSINE-3',5'-MONOPHOSPHATE, ...
Authors:Campbell, J.C, Reger, A.S, Huang, G.Y, Sankaran, B, Kim, J.J, Kim, C.W.
Deposit date:2015-06-04
Release date:2016-01-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structural Basis of Cyclic Nucleotide Selectivity in cGMP-dependent Protein Kinase II.
J.Biol.Chem., 291, 2016
6GKY
DownloadVisualize
BU of 6gky by Molmil
Crystal structure of Coclaurine N-Methyltransferase (CNMT) bound to N-methylheliamine and SAH
Descriptor: 6,7-dimethoxy-2,4-dihydro-1~{H}-isoquinolin-3-one, Coclaurine N-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Dunstan, M.S, Levy, C.W.
Deposit date:2018-05-22
Release date:2018-06-06
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.847 Å)
Cite:Structure and Biocatalytic Scope of Coclaurine N-Methyltransferase.
Angew. Chem. Int. Ed. Engl., 57, 2018
6GI9
DownloadVisualize
BU of 6gi9 by Molmil
Crystal structure of pentaerythritol tetranitrate reductase (PETNR) mutant I107L
Descriptor: ACETATE ION, FLAVIN MONONUCLEOTIDE, Pentaerythritol tetranitrate reductase
Authors:Levy, C.W.
Deposit date:2018-05-10
Release date:2019-03-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Nonequivalence of Second Sphere "Noncatalytic" Residues in Pentaerythritol Tetranitrate Reductase in Relation to Local Dynamics Linked to H-Transfer in Reactions with NADH and NADPH Coenzymes.
Acs Catalysis, 8, 2018
5C5T
DownloadVisualize
BU of 5c5t by Molmil
The crystal structure of viral collagen prolyl hydroxylase vCPH from Paramecium Bursaria Chlorella virus-1 - 2OG complex
Descriptor: 2-OXOGLUTARIC ACID, MANGANESE (II) ION, Prolyl 4-hydroxylase, ...
Authors:Levy, C.W.
Deposit date:2015-06-22
Release date:2015-09-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.598 Å)
Cite:Structure and Mechanism of a Viral Collagen Prolyl Hydroxylase.
Biochemistry, 54, 2015
5C5U
DownloadVisualize
BU of 5c5u by Molmil
The crystal structure of viral collagen prolyl hydroxylase vCPH from Paramecium Bursaria Chlorella virus-1 - Truncated Construct
Descriptor: ACETATE ION, MANGANESE (II) ION, Prolyl 4-hydroxylase, ...
Authors:Longbotham, J.E, Levy, C.W, Johannisen, L.O, Tarhonskaya, H, Jiang, S, Loenarz, C, Flashman, E, Hay, S, Schofiled, C.J, Scrutton, N.S.
Deposit date:2015-06-22
Release date:2015-09-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure and Mechanism of a Viral Collagen Prolyl Hydroxylase.
Biochemistry, 54, 2015
4Z43
DownloadVisualize
BU of 4z43 by Molmil
Crystal structure of Tryptophan 7-halogenase (PrnA) Mutant E450K
Descriptor: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Flavin-dependent tryptophan halogenase PrnA, ...
Authors:Levy, C.W.
Deposit date:2015-04-01
Release date:2016-01-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Extending the biocatalytic scope of regiocomplementary flavin-dependent halogenase enzymes.
Chem Sci, 6, 2015
5C6C
DownloadVisualize
BU of 5c6c by Molmil
PKG II's Amino Terminal Cyclic Nucleotide Binding Domain (CNB-A) in a complex with cAMP
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, CADMIUM ION, ...
Authors:Campbell, J.C, Reger, A.S, Huang, G.Y, Sankaran, B, Kim, J.J, Kim, C.W.
Deposit date:2015-06-22
Release date:2016-01-20
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural Basis of Cyclic Nucleotide Selectivity in cGMP-dependent Protein Kinase II.
J.Biol.Chem., 291, 2016
5C8W
DownloadVisualize
BU of 5c8w by Molmil
PKG II's Amino Terminal Cyclic Nucleotide Binding Domain (CNB-A) in a complex with cGMP
Descriptor: CYCLIC GUANOSINE MONOPHOSPHATE, MALONIC ACID, SODIUM ION, ...
Authors:Campbell, J.C, Reger, A.S, Huang, G.Y, Sankaran, B, Kim, J.J, Kim, C.W.
Deposit date:2015-06-26
Release date:2016-01-20
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis of Cyclic Nucleotide Selectivity in cGMP-dependent Protein Kinase II.
J.Biol.Chem., 291, 2016
7O1D
DownloadVisualize
BU of 7o1d by Molmil
A de novo Enzyme for the Morita-Baylis-Hillman Reaction BH32.7
Descriptor: BH32.7 protein
Authors:Levy, C.W.
Deposit date:2021-03-29
Release date:2021-11-03
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Engineering an efficient and enantioselective enzyme for the Morita-Baylis-Hillman reaction.
Nat.Chem., 14, 2022
7LRD
DownloadVisualize
BU of 7lrd by Molmil
Cryo-EM of the SLFN12-PDE3A complex: Consensus subset model
Descriptor: (4~{R})-3-[4-(diethylamino)-3-[oxidanyl(oxidanylidene)-$l^{4}-azanyl]phenyl]-4-methyl-4,5-dihydro-1~{H}-pyridazin-6-one, MAGNESIUM ION, MANGANESE (II) ION, ...
Authors:Fuller, J.R, Garvie, C.W, Lemke, C.T.
Deposit date:2021-02-16
Release date:2021-06-09
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.22 Å)
Cite:Structure of PDE3A-SLFN12 complex reveals requirements for activation of SLFN12 RNase.
Nat Commun, 12, 2021
7LRE
DownloadVisualize
BU of 7lre by Molmil
Cryo-EM of the SLFN12-PDE3A complex: SLFN12 body refinement
Descriptor: Schlafen family member 12, ZINC ION
Authors:Fuller, J.R, Garvie, C.W, Lemke, C.T.
Deposit date:2021-02-16
Release date:2021-06-09
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:Structure of PDE3A-SLFN12 complex reveals requirements for activation of SLFN12 RNase.
Nat Commun, 12, 2021
7LRC
DownloadVisualize
BU of 7lrc by Molmil
Cryo-EM of the SLFN12-PDE3A complex: PDE3A body refinement
Descriptor: (4~{R})-3-[4-(diethylamino)-3-[oxidanyl(oxidanylidene)-$l^{4}-azanyl]phenyl]-4-methyl-4,5-dihydro-1~{H}-pyridazin-6-one, MAGNESIUM ION, MANGANESE (II) ION, ...
Authors:Fuller, J.R, Garvie, C.W, Lemke, C.T.
Deposit date:2021-02-16
Release date:2021-06-09
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:Structure of PDE3A-SLFN12 complex reveals requirements for activation of SLFN12 RNase.
Nat Commun, 12, 2021
7LJP
DownloadVisualize
BU of 7ljp by Molmil
Structure of Thermotoga maritima SmpB
Descriptor: 1,4-DIETHYLENE DIOXIDE, GLYCEROL, SULFATE ION, ...
Authors:Chan, C.W, Mondragon, A.
Deposit date:2021-01-29
Release date:2022-02-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of Thermotoga maritima SmpB reveals its C-terminal tail domain in a helical conformation mimicking that of a ribosome-bound state
To Be Published
7LHC
DownloadVisualize
BU of 7lhc by Molmil
NMR Solution Structure of [T20K]kalata B1
Descriptor: Kalata-B1
Authors:Harvey, P.J, Craik, D.J, Gruber, C.W.
Deposit date:2021-01-22
Release date:2021-10-20
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Importance of the Cyclic Cystine Knot Structural Motif for Immunosuppressive Effects of Cyclotides.
Acs Chem.Biol., 16, 2021

224004

PDB entries from 2024-08-21

PDB statisticsPDBj update infoContact PDBjnumon