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PDB: 123 results

6PXF
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BU of 6pxf by Molmil
Structure of human Cathepsin K with an ectosteric inhibitor at 1.85 Angstrom resolution
Descriptor: 1,6,6-trimethyl-10,11-dioxo-6,7,8,9,10,11-hexahydrophenanthro[1,2-b]furan-2-sulfonic acid, Cathepsin K
Authors:Law, S, Aguda, A.H, Nguyen, N.T, Brayer, G.D, Bromme, D.
Deposit date:2019-07-25
Release date:2020-07-29
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of human Cathepsin K with an ectosteric inhibitor at 1.85 Angstrom resolution
To Be Published
4X0N
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BU of 4x0n by Molmil
Porcine pancreatic alpha-amylase in complex with helianthamide, a novel proteinaceous inhibitor
Descriptor: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
Authors:Williams, L.K, Brayer, G.D.
Deposit date:2014-11-21
Release date:2015-11-25
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.6001 Å)
Cite:Structural Templating and Guided Refolding of the Potent Naturally Occurring Peptide Helianthamide Within the Active Site of Amylase, a Diabetes and Obesity Therapeutic Target
To Be Published
1SGC
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BU of 1sgc by Molmil
THE 1.8 ANGSTROMS STRUCTURE OF THE COMPLEX BETWEEN CHYMOSTATIN AND STREPTOMYCES GRISEUS PROTEASE A. A MODEL FOR SERINE PROTEASE CATALYTIC TETRAHEDRAL INTERMEDIATES
Descriptor: CHYMOSTATIN A, PROTEINASE A
Authors:Delbaere, L.T.J, Brayer, G.D.
Deposit date:1986-04-18
Release date:1986-07-14
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The 1.8 A structure of the complex between chymostatin and Streptomyces griseus protease A. A model for serine protease catalytic tetrahedral intermediates.
J.Mol.Biol., 183, 1985
4YV8
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BU of 4yv8 by Molmil
Crystal structure of cathepsin K bound to the covalent inhibitor lichostatinal
Descriptor: Cathepsin K, Lichostatinal, SULFATE ION
Authors:Aguda, A.H, Nguyen, N.T, Bromme, D, Brayer, G.D.
Deposit date:2015-03-19
Release date:2016-05-04
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Affinity Crystallography: A New Approach to Extracting High-Affinity Enzyme Inhibitors from Natural Extracts.
J.Nat.Prod., 79, 2016
4YVA
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BU of 4yva by Molmil
Cathepsin K co-crystallized with actinomycetes extract
Descriptor: Cathepsin K, SULFATE ION
Authors:Aguda, A.H, Nguyen, N.T, Bromme, D, Brayer, G.D.
Deposit date:2015-03-19
Release date:2016-05-04
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Affinity Crystallography: A New Approach to Extracting High-Affinity Enzyme Inhibitors from Natural Extracts.
J.Nat.Prod., 79, 2016
1WLA
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BU of 1wla by Molmil
MYOGLOBIN (HORSE HEART) RECOMBINANT WILD-TYPE
Descriptor: MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Maurus, R, Brayer, G.D.
Deposit date:1997-09-24
Release date:1998-01-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A myoglobin variant with a polar substitution in a conserved hydrophobic cluster in the heme binding pocket.
Biochim.Biophys.Acta, 1341, 1997
1XCH
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BU of 1xch by Molmil
MYOGLOBIN (HORSE HEART) MUTANT WITH LEU 104 REPLACED BY ASN (L104N)
Descriptor: MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Maurus, R, Brayer, G.D.
Deposit date:1997-06-06
Release date:1997-09-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A myoglobin variant with a polar substitution in a conserved hydrophobic cluster in the heme binding pocket.
Biochim.Biophys.Acta, 1341, 1997
2QV4
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BU of 2qv4 by Molmil
Human pancreatic alpha-amylase complexed with nitrite and acarbose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4,6-dideoxy-4-{[(1S,4R,5R,6S)-4-{[alpha-D-glucopyranosyl-(1->4)-alpha-D-glucopyranosyl-(1->4)-alpha-D-glucopyranosyl]oxy}-5,6-dihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose, CALCIUM ION, ...
Authors:Williams, L.K, Maurus, R, Brayer, G.D.
Deposit date:2007-08-07
Release date:2008-03-25
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Alternative catalytic anions differentially modulate human alpha-amylase activity and specificity
Biochemistry, 47, 2008
2QMK
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BU of 2qmk by Molmil
Human pancreatic alpha-amylase complexed with nitrite
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, NITRITE ION, ...
Authors:Williams, L.K, Maurus, R, Brayer, G.D.
Deposit date:2007-07-16
Release date:2008-03-25
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Alternative catalytic anions differentially modulate human alpha-amylase activity and specificity
Biochemistry, 47, 2008
4X9Y
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BU of 4x9y by Molmil
Wild-Type Human Pancreatic Alpha-Amylase at True Atomic Resolution (1.07 A)
Descriptor: CALCIUM ION, CHLORIDE ION, Pancreatic alpha-amylase
Authors:Caner, S, Brayer, G.D.
Deposit date:2014-12-11
Release date:2014-12-31
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.07 Å)
Cite:Wild-Type Human Pancreatic Alpha-Amylase at True Atomic Resolution (1.07 A)
To be published
1KGX
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Three Dimensional Structure Analysis of the R195Q Variant of Human Pancreatic Alpha Amylase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ALPHA-AMYLASE, PANCREATIC, ...
Authors:Numao, S, Maurus, R, Sidhu, G, Wang, Y, Overall, C.M, Brayer, G.D, Withers, S.G.
Deposit date:2001-11-28
Release date:2002-01-16
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Probing the role of the chloride ion in the mechanism of human pancreatic alpha-amylase.
Biochemistry, 41, 2002
1KGU
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BU of 1kgu by Molmil
THREE DIMENSIONAL STRUCTURE ANALYSIS OF THE R337A VARIANT OF HUMAN PANCREATIC ALPHA-AMYLASE
Descriptor: ALPHA-AMYLASE, PANCREATIC, CALCIUM ION
Authors:Numao, S, Maurus, R, Sidhu, G, Wang, Y, Overall, C.M, Brayer, G.D, Withers, S.G.
Deposit date:2001-11-28
Release date:2002-01-16
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Probing the role of the chloride ion in the mechanism of human pancreatic alpha-amylase.
Biochemistry, 41, 2002
5TDI
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BU of 5tdi by Molmil
Crystal structure of Cathepsin K with a covalently-linked inhibitor at 1.4 Angstrom resolution.
Descriptor: 4-fluoro-N-{1-[(Z)-iminomethyl]cyclopropyl}-N~2~-{(1S)-2,2,2-trifluoro-1-[4'-(methylsulfonyl)[1,1'-biphenyl]-4-yl]ethyl }-L-leucinamide, Cathepsin K
Authors:Law, S, Aguda, A, Nguyen, N, Brayer, G, Bromme, D.
Deposit date:2016-09-19
Release date:2017-01-25
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Identification of mouse cathepsin K structural elements that regulate the potency of odanacatib.
Biochem. J., 474, 2017
5T6U
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BU of 5t6u by Molmil
Crystal structure of mouse cathepsin K at 2.9 Angstroms resolution.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cathepsin K, SULFATE ION
Authors:Law, S, Aguda, A, Nguyen, N, Brayer, G, Bromme, D.
Deposit date:2016-09-01
Release date:2017-01-18
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Identification of mouse cathepsin K structural elements that regulate the potency of odanacatib.
Biochem. J., 474, 2017
1KGW
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BU of 1kgw by Molmil
THREE DIMENSIONAL STRUCTURE ANALYSIS OF THE R337Q VARIANT OF HUMAN PANCREATIC ALPHA-MYLASE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ALPHA-AMYLASE, PANCREATIC, ...
Authors:Numao, S, Maurus, R, Sidhu, G, Wang, Y, Overall, C.M, Brayer, G.D, Withers, S.G.
Deposit date:2001-11-28
Release date:2002-01-16
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Probing the role of the chloride ion in the mechanism of human pancreatic alpha-amylase.
Biochemistry, 41, 2002
1KBB
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BU of 1kbb by Molmil
Mechanistic Analyses of Catalysis in Human Pancreatic alpha-Amylase: Detailed Kinetic and Structural Studies of Mutants of Three Conserved Carboxylic Acids
Descriptor: ALPHA-AMYLASE, PANCREATIC, CALCIUM ION, ...
Authors:Rydberg, E.H, Li, C, Maurus, R, Overall, C.M, Brayer, G.D, Withers, S.G.
Deposit date:2001-11-05
Release date:2002-04-10
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Mechanistic analyses of catalysis in human pancreatic alpha-amylase: detailed kinetic and structural studies of mutants of three conserved carboxylic acids.
Biochemistry, 41, 2002
1KBK
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BU of 1kbk by Molmil
Mechanistic Analyses of Catalysis in Human Pancreatic Alpha-Amylase: Detailed Kinetic and Structural Studies of Mutants of Three Conserved Carboxylic Acids
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ALPHA-AMYLASE, PANCREATIC, ...
Authors:Rydberg, E.H, Li, C, Maurus, R, Overall, C.M, Brayer, G.D, Withers, S.G.
Deposit date:2001-11-06
Release date:2002-04-10
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Mechanistic analyses of catalysis in human pancreatic alpha-amylase: detailed kinetic and structural studies of mutants of three conserved carboxylic acids.
Biochemistry, 41, 2002
1U33
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BU of 1u33 by Molmil
In situ extension as an approach for identifying novel alpha-amylase inhibitors
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4'-O-METHYL-MALTOSYL-ALPHA (1,4)-(Z, 3S,4S,5R,6R)-3,4,5-TRIHYDROXY-6-HYDROXYMETHYL-PIPERIDIN-2-ONE, ...
Authors:Numao, S, Li, C, Damager, I, Wrodnigg, T.M, Begum, A, Overall, C.M, Brayer, G.D, Withers, S.G.
Deposit date:2004-07-20
Release date:2004-09-07
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:In Situ Extension as an Approach for Identifying Novel alpha-Amylase Inhibitors.
J.Biol.Chem., 279, 2004
1U30
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In situ extension as an approach for identifying novel alpha-amylase inhibitors, structure containing maltosyl-alpha (1,4)-D-gluconhydroximo-1,5-lactam
Descriptor: (2S,3S,4R,5R)-6-(HYDROXYAMINO)-2-(HYDROXYMETHYL)-2,3,4,5-TETRAHYDROPYRIDINE-3,4,5-TRIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-amylase, ...
Authors:Numao, S, Li, C, Damager, I, Wrodnigg, T.M, Begum, A, Overall, C.M, Brayer, G.D, Withers, S.G.
Deposit date:2004-07-20
Release date:2004-09-07
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:In Situ Extension as an Approach for Identifying Novel alpha-Amylase Inhibitors.
J.Biol.Chem., 279, 2004
1U2Y
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BU of 1u2y by Molmil
In situ extension as an approach for identifying novel alpha-amylase inhibitors, structure containing D-gluconhydroximo-1,5-lactam
Descriptor: (2S,3S,4R,5R)-6-(HYDROXYAMINO)-2-(HYDROXYMETHYL)-2,3,4,5-TETRAHYDROPYRIDINE-3,4,5-TRIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-amylase, ...
Authors:Numao, S, Li, C, Damager, I, Wrodnigg, T.M, Begum, A, Overall, C.M, Brayer, G.D, Withers, S.G.
Deposit date:2004-07-20
Release date:2004-09-07
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:In Situ Extension as an Approach for Identifying Novel alpha-Amylase Inhibitors.
J.Biol.Chem., 279, 2004
1BVV
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BU of 1bvv by Molmil
SUGAR RING DISTORTION IN THE GLYCOSYL-ENZYME INTERMEDIATE OF A FAMILY G/11 XYLANASE
Descriptor: ENDO-1,4-BETA-XYLANASE, beta-D-xylopyranose-(1-4)-1,5-anhydro-2-deoxy-2-fluoro-D-xylitol
Authors:Sidhu, G, Brayer, G.D.
Deposit date:1998-09-18
Release date:1999-06-08
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Sugar ring distortion in the glycosyl-enzyme intermediate of a family G/11 xylanase.
Biochemistry, 38, 1999
2ALP
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BU of 2alp by Molmil
REFINED STRUCTURE OF ALPHA-LYTIC PROTEASE AT 1.7 ANGSTROMS RESOLUTION. ANALYSIS OF HYDROGEN BONDING AND SOLVENT STRUCTURE
Descriptor: ALPHA-LYTIC PROTEASE, SULFATE ION
Authors:Fujinaga, M, Delbaere, L.T.J, Brayer, G.D, James, M.N.G.
Deposit date:1985-03-07
Release date:1985-07-17
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Refined structure of alpha-lytic protease at 1.7 A resolution. Analysis of hydrogen bonding and solvent structure.
J.Mol.Biol., 184, 1985
1RSE
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BU of 1rse by Molmil
MYOGLOBIN (HORSE HEART) MUTANT WITH SER 92 REPLACED BY ASP (S92D)
Descriptor: HORSE HEART MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Burk, D.L, Brayer, G.D.
Deposit date:1996-06-20
Release date:1996-12-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Electrostatic modification of the active site of myoglobin: characterization of the proximal Ser92Asp variant.
Biochemistry, 35, 1996
1YMC
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BU of 1ymc by Molmil
THREE-DIMENSIONAL STRUCTURE OF CYANOMET-SULFMYOGLOBIN C
Descriptor: CYANIDE ION, CYANOMET-SULFMYOGLOBIN, SULFATE ION, ...
Authors:Evans, S.V, Brayer, G.D.
Deposit date:1993-09-27
Release date:1994-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Three-dimensional structure of cyanomet-sulfmyoglobin C.
Proc.Natl.Acad.Sci.USA, 91, 1994
1YMA
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BU of 1yma by Molmil
STRUCTURAL CHARACTERIZATION OF HEME LIGATION IN THE HIS64-->TYR VARIANT OF MYOGLOBIN
Descriptor: MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Maurus, R, Brayer, G.D.
Deposit date:1993-09-27
Release date:1994-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural characterization of heme ligation in the His64-->Tyr variant of myoglobin.
J.Biol.Chem., 269, 1994

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