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PDB: 123 results

3FFV
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BU of 3ffv by Molmil
Crystal Structure Analysis of Syd
Descriptor: Protein syd
Authors:Maurus, R, Brayer, G.D.
Deposit date:2008-12-04
Release date:2009-01-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure, Binding, and Activity of Syd, a SecY-interacting Protein
J.Biol.Chem., 284, 2009
4GQR
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BU of 4gqr by Molmil
Human Pancreatic alpha-amylase in complex with myricetin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3,5,7-TRIHYDROXY-2-(3,4,5-TRIHYDROXYPHENYL)-4H-CHROMEN-4-ONE, CALCIUM ION, ...
Authors:Williams, L.K, Brayer, G.D.
Deposit date:2012-08-23
Release date:2012-10-24
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Order and disorder: differential structural impacts of myricetin and ethyl caffeate on human amylase, an antidiabetic target.
J.Med.Chem., 55, 2012
4G6B
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BU of 4g6b by Molmil
Three dimensional structure analysis of the type II citrate synthase from e.coli
Descriptor: Citrate synthase, SULFATE ION
Authors:Nguyen, N.T, Maurus, R, Stokell, D.J, Ayed, A, Duckworth, H.W, Brayer, G.D.
Deposit date:2012-07-18
Release date:2013-11-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Comparative Analysis of Folding and Substrate Binding Sites between Regulated Hexameric Type II Citrate Synthases and Unregulated Dimeric Type I Enzymes.
Biochemistry, 40, 2001
3IJ7
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BU of 3ij7 by Molmil
Directed 'in situ' Elongation as a Strategy to Characterize the Covalent Glycosyl-Enzyme Catalytic Intermediate of Human Pancreatic a-Amylase
Descriptor: 4-O-methyl-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranosyl fluoride, 4-O-methyl-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-2)-5-fluoro-alpha-L-idopyranose, CALCIUM ION, ...
Authors:Li, C, Zhang, R, Withers, S.G, Brayer, G.D.
Deposit date:2009-08-03
Release date:2009-10-27
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Directed "in situ" inhibitor elongation as a strategy to structurally characterize the covalent glycosyl-enzyme intermediate of human pancreatic alpha-amylase
Biochemistry, 48, 2009
2ALP
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BU of 2alp by Molmil
REFINED STRUCTURE OF ALPHA-LYTIC PROTEASE AT 1.7 ANGSTROMS RESOLUTION. ANALYSIS OF HYDROGEN BONDING AND SOLVENT STRUCTURE
Descriptor: ALPHA-LYTIC PROTEASE, SULFATE ION
Authors:Fujinaga, M, Delbaere, L.T.J, Brayer, G.D, James, M.N.G.
Deposit date:1985-03-07
Release date:1985-07-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Refined structure of alpha-lytic protease at 1.7 A resolution. Analysis of hydrogen bonding and solvent structure.
J.Mol.Biol., 184, 1985
1YCC
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BU of 1ycc by Molmil
HIGH-RESOLUTION REFINEMENT OF YEAST ISO-1-CYTOCHROME C AND COMPARISONS WITH OTHER EUKARYOTIC CYTOCHROMES C
Descriptor: CYTOCHROME C, HEME C, SULFATE ION
Authors:Louie, G.V, Brayer, G.D.
Deposit date:1990-05-09
Release date:1991-07-15
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:High-resolution refinement of yeast iso-1-cytochrome c and comparisons with other eukaryotic cytochromes c.
J.Mol.Biol., 214, 1990
4N8W
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BU of 4n8w by Molmil
cathepsin K - chondroitin sulfate complex
Descriptor: 2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose-(1-4)-beta-D-glucopyranuronic acid, Cathepsin K
Authors:Aguda, A.H, Nguyen, N.T, Bromme, D, Brayer, G.D.
Deposit date:2013-10-18
Release date:2014-11-26
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Structural basis of collagen fiber degradation by cathepsin K.
Proc.Natl.Acad.Sci.USA, 111, 2014
4N79
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Structure of Cathepsin K-dermatan sulfate complex
Descriptor: Cathepsin K, alpha-L-idopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose-(1-4)-alpha-L-idopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose-(1-4)-alpha-L-idopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose
Authors:Aguda, A.H, Nguyen, N.T, Bromme, D, Brayer, G.D.
Deposit date:2013-10-15
Release date:2014-11-26
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Structural basis of collagen fiber degradation by cathepsin K.
Proc.Natl.Acad.Sci.USA, 111, 2014
4JAG
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BU of 4jag by Molmil
STRUCTURAL DETERMINATION OF THE A50T:S279G:S280K:V281K:K282E:H283N VARIANT OF CITRATE SYNTHASE FROM E. COLI COMPLEXED WITH oxaloacetate
Descriptor: Citrate synthase, OXALOACETATE ION, SULFATE ION
Authors:Maurus, R, Brayer, G.D.
Deposit date:2013-02-18
Release date:2013-07-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Enzyme-substrate complexes of allosteric citrate synthase: Evidence for a novel intermediate in substrate binding.
Biochim.Biophys.Acta, 1834, 2013
4JAD
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BU of 4jad by Molmil
STRUCTURAL DETERMINATION OF THE A50T:S279G:S280K:V281K:K282E:H283N VARIANT OF CITRATE SYNTHASE from E. COLI
Descriptor: Citrate synthase, SULFATE ION
Authors:Maurus, R, Brayer, G.D.
Deposit date:2013-02-18
Release date:2013-07-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Enzyme-substrate complexes of allosteric citrate synthase: Evidence for a novel intermediate in substrate binding.
Biochim.Biophys.Acta, 1834, 2013
1RAP
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BU of 1rap by Molmil
THE STRUCTURE AND FUNCTION OF OMEGA LOOP A REPLACEMENTS IN CYTOCHROME C
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, REP A2 ISO-1-CYTOCHROME C, SULFATE ION
Authors:Murphy, M.E.P, Brayer, G.D.
Deposit date:1992-08-25
Release date:1993-10-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The structure and function of omega loop A replacements in cytochrome c.
Protein Sci., 2, 1993
1RAQ
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BU of 1raq by Molmil
THE STRUCTURE AND FUNCTION OF OMEGA LOOP A REPLACEMENTS IN CYTOCHROME C
Descriptor: HEME C, REP A2 ISO-1-CYTOCHROME C, SULFATE ION
Authors:Murphy, M.E.P, Brayer, G.D.
Deposit date:1992-08-25
Release date:1993-10-31
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The structure and function of omega loop A replacements in cytochrome c.
Protein Sci., 2, 1993
4JAF
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BU of 4jaf by Molmil
STRUCTURAL DETERMINATION OF THE A50T:S279G:S280K:V281K:K282E:H283N VARIANT OF CITRATE SYNTHASE FROM E. COLI COMPLEXED with NADH
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Citrate synthase, SULFATE ION
Authors:Maurus, R, Brayer, G.D.
Deposit date:2013-02-18
Release date:2013-07-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Enzyme-substrate complexes of allosteric citrate synthase: Evidence for a novel intermediate in substrate binding.
Biochim.Biophys.Acta, 1834, 2013
4JAE
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BU of 4jae by Molmil
STRUCTURAL DETERMINATION OF THE A50T:S279G:S280K:V281K:K282E:H283N VARIANT OF CITRATE SYNTHASE FROM E. COLI complexed WITH S-CARBOXYMETHYL-COA
Descriptor: CARBOXYMETHYL COENZYME *A, Citrate synthase, SULFATE ION
Authors:Maurus, R, Brayer, G.D.
Deposit date:2013-02-18
Release date:2013-07-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Enzyme-substrate complexes of allosteric citrate synthase: Evidence for a novel intermediate in substrate binding.
Biochim.Biophys.Acta, 1834, 2013
1YMC
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BU of 1ymc by Molmil
THREE-DIMENSIONAL STRUCTURE OF CYANOMET-SULFMYOGLOBIN C
Descriptor: CYANIDE ION, CYANOMET-SULFMYOGLOBIN, SULFATE ION, ...
Authors:Evans, S.V, Brayer, G.D.
Deposit date:1993-09-27
Release date:1994-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Three-dimensional structure of cyanomet-sulfmyoglobin C.
Proc.Natl.Acad.Sci.USA, 91, 1994
1YMA
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BU of 1yma by Molmil
STRUCTURAL CHARACTERIZATION OF HEME LIGATION IN THE HIS64-->TYR VARIANT OF MYOGLOBIN
Descriptor: MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Maurus, R, Brayer, G.D.
Deposit date:1993-09-27
Release date:1994-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural characterization of heme ligation in the His64-->Tyr variant of myoglobin.
J.Biol.Chem., 269, 1994
5T6U
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BU of 5t6u by Molmil
Crystal structure of mouse cathepsin K at 2.9 Angstroms resolution.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cathepsin K, SULFATE ION
Authors:Law, S, Aguda, A, Nguyen, N, Brayer, G, Bromme, D.
Deposit date:2016-09-01
Release date:2017-01-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Identification of mouse cathepsin K structural elements that regulate the potency of odanacatib.
Biochem. J., 474, 2017
5TDI
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BU of 5tdi by Molmil
Crystal structure of Cathepsin K with a covalently-linked inhibitor at 1.4 Angstrom resolution.
Descriptor: 4-fluoro-N-{1-[(Z)-iminomethyl]cyclopropyl}-N~2~-{(1S)-2,2,2-trifluoro-1-[4'-(methylsulfonyl)[1,1'-biphenyl]-4-yl]ethyl }-L-leucinamide, Cathepsin K
Authors:Law, S, Aguda, A, Nguyen, N, Brayer, G, Bromme, D.
Deposit date:2016-09-19
Release date:2017-01-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Identification of mouse cathepsin K structural elements that regulate the potency of odanacatib.
Biochem. J., 474, 2017
3BAX
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BU of 3bax by Molmil
N298S Variant of Human Pancreatic Alpha-Amylase in Complex with Azide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, AZIDE ION, CALCIUM ION, ...
Authors:Maurus, R, Brayer, G.D.
Deposit date:2007-11-08
Release date:2008-03-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Alternative catalytic anions differentially modulate human alpha-amylase activity and specificity
Biochemistry, 47, 2008
3BAW
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BU of 3baw by Molmil
Human pancreatic alpha-amylase complexed with azide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, AZIDE ION, CALCIUM ION, ...
Authors:Maurus, R, Brayer, G.D.
Deposit date:2007-11-08
Release date:2008-03-25
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Alternative catalytic anions differentially modulate human alpha-amylase activity and specificity
Biochemistry, 47, 2008
2QMK
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BU of 2qmk by Molmil
Human pancreatic alpha-amylase complexed with nitrite
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, NITRITE ION, ...
Authors:Williams, L.K, Maurus, R, Brayer, G.D.
Deposit date:2007-07-16
Release date:2008-03-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Alternative catalytic anions differentially modulate human alpha-amylase activity and specificity
Biochemistry, 47, 2008
2QV4
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BU of 2qv4 by Molmil
Human pancreatic alpha-amylase complexed with nitrite and acarbose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4,6-dideoxy-4-{[(1S,4R,5R,6S)-4-{[alpha-D-glucopyranosyl-(1->4)-alpha-D-glucopyranosyl-(1->4)-alpha-D-glucopyranosyl]oxy}-5,6-dihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose, CALCIUM ION, ...
Authors:Williams, L.K, Maurus, R, Brayer, G.D.
Deposit date:2007-08-07
Release date:2008-03-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Alternative catalytic anions differentially modulate human alpha-amylase activity and specificity
Biochemistry, 47, 2008
1HV0
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BU of 1hv0 by Molmil
DISSECTING ELECTROSTATIC INTERACTIONS AND THE PH-DEPENDENT ACTIVITY OF A FAMILY 11 GLYCOSIDASE
Descriptor: ENDO-1,4-BETA-XYLANASE
Authors:Joshi, M.D, Sidhu, G, Nielsen, J.E, Brayer, G.D, Withers, S.G, McIntosh, L.P.
Deposit date:2001-01-05
Release date:2001-09-14
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Dissecting the electrostatic interactions and pH-dependent activity of a family 11 glycosidase.
Biochemistry, 40, 2001
5TD4
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BU of 5td4 by Molmil
Starch binding sites on the Human pancreatic alpha amylase D300N variant complexed with an octaose substrate.
Descriptor: CALCIUM ION, CHLORIDE ION, Pancreatic alpha-amylase, ...
Authors:Caner, S, Brayer, G.D.
Deposit date:2016-09-16
Release date:2016-11-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Evaluation of the Significance of Starch Surface Binding Sites on Human Pancreatic alpha-Amylase.
Biochemistry, 55, 2016
3BAK
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BU of 3bak by Molmil
N298S mutant of Human Pancreatic Alpha-Amylase in complex with nitrate
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, NITRATE ION, ...
Authors:Fredriksen, J.R, Maurus, R, Brayer, G.D.
Deposit date:2007-11-08
Release date:2008-03-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Alternative catalytic anions differentially modulate human alpha-amylase activity and specificity
Biochemistry, 47, 2008

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