Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 37 results

6U08
DownloadVisualize
BU of 6u08 by Molmil
Double-stranded DNA-specific cytidine deaminase type VI secretion system effector and cognate immunity complex from Burkholderia cenocepacia
Descriptor: DddI, Double-stranded DNA-specific cytidine deaminase, ZINC ION
Authors:Bosch, D.E, de Moraes, M.M.H, Mougous, J.D.
Deposit date:2019-08-13
Release date:2020-07-15
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.491 Å)
Cite:A bacterial cytidine deaminase toxin enables CRISPR-free mitochondrial base editing.
Nature, 583, 2020
8FZY
DownloadVisualize
BU of 8fzy by Molmil
Bacteroides spp. Ntox15 domain type VI secretion system effector Tde1
Descriptor: 1,2-ETHANEDIOL, Ntox15 domain-containing protein, SULFATE ION
Authors:Bosch, D.E, Mougous, J.D.
Deposit date:2023-01-30
Release date:2023-07-05
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural disruption of Ntox15 nuclease effector domains by immunity proteins protects against type VI secretion system intoxication in Bacteroidales.
Mbio, 14, 2023
8FZZ
DownloadVisualize
BU of 8fzz by Molmil
Phocaeicola vulgatus type VI secretion system Ntox15 effector and immunity Tde2/Tdi2
Descriptor: DUF1851 domain-containing protein, Ntox15 domain-containing protein
Authors:Bosch, D.E, Mougous, J.D.
Deposit date:2023-01-30
Release date:2023-07-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Structural disruption of Ntox15 nuclease effector domains by immunity proteins protects against type VI secretion system intoxication in Bacteroidales.
Mbio, 14, 2023
8G0K
DownloadVisualize
BU of 8g0k by Molmil
Bacteroides multispecies type VI secretion system Ntox15 domain effector and immunity Tde1/Tdi1
Descriptor: DUF1851 domain-containing protein, Ntox15 domain-containing protein
Authors:Bosch, D.E, Mougous, J.D.
Deposit date:2023-01-31
Release date:2023-07-05
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural disruption of Ntox15 nuclease effector domains by immunity proteins protects against type VI secretion system intoxication in Bacteroidales.
Mbio, 14, 2023
4MIT
DownloadVisualize
BU of 4mit by Molmil
Crystal structure of E. histolytica RacC bound to the EhPAK4 PBD
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Rho family GTPase, ...
Authors:Bosch, D.E, Siderovski, D.P.
Deposit date:2013-09-02
Release date:2014-09-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Entamoeba histolytica RacC Selectively Engages p21-Activated Kinase Effectors.
Biochemistry, 54, 2015
7JTU
DownloadVisualize
BU of 7jtu by Molmil
Cytidine deaminase T6S toxin from Pseudomonas syringae
Descriptor: SsdA, SsdAI
Authors:Bosch, D.E, Hsu, F, de Moraes, M.H, Mougous, J.D.
Deposit date:2020-08-18
Release date:2021-03-31
Last modified:2021-04-07
Method:X-RAY DIFFRACTION (3 Å)
Cite:An interbacterial DNA deaminase toxin directly mutagenizes surviving target populations.
Elife, 10, 2021
4GU2
DownloadVisualize
BU of 4gu2 by Molmil
Crystal structure of ubiquitin from Entamoeba histolytica to 1.35 Angstrom
Descriptor: Ubiquitin
Authors:Bosch, D.E, Siderovski, D.P.
Deposit date:2012-08-29
Release date:2012-12-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural Determinants of Ubiquitin Conjugation in Entamoeba histolytica.
J.Biol.Chem., 288, 2013
4GPR
DownloadVisualize
BU of 4gpr by Molmil
Crystal structure of EhUbc5, a ubiquitin conjugating enzyme from Entamoeba histolytica
Descriptor: COBALT (II) ION, Ubiquitin-conjugating enzyme family protein
Authors:Bosch, D.E, Siderovski, D.P.
Deposit date:2012-08-21
Release date:2012-12-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Determinants of Ubiquitin Conjugation in Entamoeba histolytica.
J.Biol.Chem., 288, 2013
6DRH
DownloadVisualize
BU of 6drh by Molmil
ADP-ribosyltransferase toxin/immunity pair
Descriptor: ADP-ribosyl-(Dinitrogen reductase) hydrolase, MAGNESIUM ION, PAAR repeat-containing protein, ...
Authors:Bosch, D.E, Ting, S, Allaire, M, Mougous, J.D.
Deposit date:2018-06-11
Release date:2018-10-31
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.299 Å)
Cite:Bifunctional Immunity Proteins Protect Bacteria against FtsZ-Targeting ADP-Ribosylating Toxins.
Cell, 175, 2018
4FID
DownloadVisualize
BU of 4fid by Molmil
Crystal structure of a heterotrimeric G-Protein subunit from entamoeba histolytica, EHG-ALPHA-1
Descriptor: G protein alpha subunit, GUANOSINE-5'-DIPHOSPHATE
Authors:Bosch, D.E, Kimple, A.J, Muller, R.E, Gigure, P.M, Willard, F.S, Machius, M, Temple, B.R, Siderovski, D.P.
Deposit date:2012-06-08
Release date:2012-11-28
Last modified:2013-06-26
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Heterotrimeric G-protein Signaling Is Critical to Pathogenic Processes in Entamoeba histolytica.
Plos Pathog., 8, 2012
4DVG
DownloadVisualize
BU of 4dvg by Molmil
Crystal structure of E. histolytica Formin1 bound to EhRho1-GTPgammaS
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, Diaphanous protein, MAGNESIUM ION, ...
Authors:Bosch, D.E, Siderovski, D.P.
Deposit date:2012-02-23
Release date:2012-11-14
Last modified:2012-11-28
Method:X-RAY DIFFRACTION (2.604 Å)
Cite:Entamoeba histolytica Rho1 Regulates Actin Polymerization through a Divergent, Diaphanous-Related Formin.
Biochemistry, 51, 2012
6DRE
DownloadVisualize
BU of 6dre by Molmil
ADP-ribosyltransferase toxin/immunity pair
Descriptor: ADP-ribosyl-(Dinitrogen reductase) hydrolase, MAGNESIUM ION, PAAR repeat-containing protein
Authors:Bosch, D.E, Ting, S, Allaire, M, Mougous, J.D.
Deposit date:2018-06-11
Release date:2018-10-31
Last modified:2018-11-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Bifunctional Immunity Proteins Protect Bacteria against FtsZ-Targeting ADP-Ribosylating Toxins.
Cell, 175, 2018
4GOU
DownloadVisualize
BU of 4gou by Molmil
Crystal structure of an RGS-RhoGEF from Entamoeba histolytica
Descriptor: EhRGS-RhoGEF
Authors:Bosch, D.E, Kimple, A.J, Muller, R.E, Willard, F.S, Machius, M, Siderovski, D.P.
Deposit date:2012-08-20
Release date:2013-01-09
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Determinants of RGS-RhoGEF Signaling Critical to Entamoeba histolytica Pathogenesis.
Structure, 21, 2013
4GSW
DownloadVisualize
BU of 4gsw by Molmil
Crystal structure of ubiquitin from Entamoeba histolytica to 2.15 Angstrom
Descriptor: SULFATE ION, Ubiquitin
Authors:Bosch, D.E, Siderovski, D.P.
Deposit date:2012-08-28
Release date:2012-12-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural Determinants of Ubiquitin Conjugation in Entamoeba histolytica.
J.Biol.Chem., 288, 2013
3REG
DownloadVisualize
BU of 3reg by Molmil
Crystal structure of EhRho1 bound to a GTP analog and Magnesium
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, MAGNESIUM ION, Rho-like small GTPase
Authors:Bosch, D.E, Qiu, C, Siderovski, D.P.
Deposit date:2011-04-04
Release date:2011-09-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Unique structural and nucleotide exchange features of the Rho1 GTPase of Entamoeba histolytica.
J.Biol.Chem., 286, 2011
3REF
DownloadVisualize
BU of 3ref by Molmil
Crystal structure of EhRho1 bound to GDP and Magnesium
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Rho-like small GTPase, ...
Authors:Bosch, D.E, Qiu, C, Siderovski, D.P.
Deposit date:2011-04-04
Release date:2011-09-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Unique structural and nucleotide exchange features of the Rho1 GTPase of Entamoeba histolytica.
J.Biol.Chem., 286, 2011
2XNS
DownloadVisualize
BU of 2xns by Molmil
Crystal Structure Of Human G alpha i1 Bound To A Designed Helical Peptide Derived From The Goloco Motif Of RGS14
Descriptor: GUANINE NUCLEOTIDE-BINDING PROTEIN G(I) SUBUNIT ALPHA-1, GUANOSINE-5'-DIPHOSPHATE, REGULATOR OF G-PROTEIN SIGNALING 14, ...
Authors:Bosch, D, Sammond, D.W, Butterfoss, G.L, Machius, M, Siderovski, D.P, Kuhlman, B.
Deposit date:2010-08-05
Release date:2011-06-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.41 Å)
Cite:Computational Design of the Sequence and Structure of a Protein-Binding Peptide.
J.Am.Chem.Soc., 133, 2011
3ONW
DownloadVisualize
BU of 3onw by Molmil
Structure of a G-alpha-i1 mutant with enhanced affinity for the RGS14 GoLoco motif.
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Guanine nucleotide-binding protein G(i) subunit alpha-1, Regulator of G-protein signaling 14, ...
Authors:Bosch, D, Kimple, A.J, Sammond, D.W, Miley, M.J, Machius, M, Kuhlman, B, Willard, F.S, Siderovski, D.P.
Deposit date:2010-08-30
Release date:2010-11-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Structural Determinants of Affinity Enhancement between GoLoco Motifs and G-Protein {alpha} Subunit Mutants.
J.Biol.Chem., 286, 2011
3QI2
DownloadVisualize
BU of 3qi2 by Molmil
A Galpha P-loop mutation prevents transition to the activated state: G42R bound to RGS14 GoLoco
Descriptor: GLYCEROL, GUANOSINE-5'-DIPHOSPHATE, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
Authors:Bosch, D.E, Willard, F.S, Kimple, A.J, Miley, M.J, Siderovski, D.P.
Deposit date:2011-01-26
Release date:2012-02-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.797 Å)
Cite:A P-loop Mutation in Galpha Subunits Prevents Transition to the Active State: Implications for G-protein Signaling in Fungal Pathogenesis
Plos Pathog., 8, 2012
3QE0
DownloadVisualize
BU of 3qe0 by Molmil
A Galpha-i1 P-loop mutation prevents transition to the activated state
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Guanine nucleotide-binding protein G(i) subunit alpha-1, KB752 peptide, ...
Authors:Bosch, D.E, Willard, F.S, Kimple, A.J, Miley, M.J, Siderovski, D.P.
Deposit date:2011-01-19
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:A P-loop Mutation in Galpha Subunits Prevents Transition to the Active State: Implications for G-protein Signaling in Fungal Pathogenesis
Plos Pathog., 8, 2012
7K1D
DownloadVisualize
BU of 7k1d by Molmil
Crystal structure of human insulin degrading enzyme (IDE) in complex with compound BDM_77291
Descriptor: (3R)-3-{4-[(3R)-4-(3,4-difluorobenzene-1-carbonyl)morpholin-3-yl]-1H-1,2,3-triazol-1-yl}-N-hydroxy-4-(naphthalen-2-yl)butanamide, 1,4-DIETHYLENE DIOXIDE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Liang, W.G, Deprez, R, Bosc, D, Tang, W.
Deposit date:2020-09-07
Release date:2021-09-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of human insulin degrading enzyme (IDE) in complex with compound 2
To Be Published
7K1F
DownloadVisualize
BU of 7k1f by Molmil
Crystal structure of human insulin degrading enzyme (IDE) in complex with compound BDM_88558
Descriptor: 1,4-DIETHYLENE DIOXIDE, 3,4-difluoro-N-({1-[(2R)-4-(hydroxyamino)-4-oxo-1-(quinolin-7-yl)butan-2-yl]-1H-1,2,3-triazol-4-yl}methyl)benzamide, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Liang, W.G, Deprez, R, Bosc, D, Tang, W.
Deposit date:2020-09-07
Release date:2021-09-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of human insulin degrading enzyme (IDE) in complex with compound 4
To Be Published
7K1E
DownloadVisualize
BU of 7k1e by Molmil
Crystal structure of human insulin degrading enzyme (IDE) in complex with compound BDM_88646
Descriptor: 1,4-DIETHYLENE DIOXIDE, 3,4-difluoro-N-[(1S)-1-{1-[(2R)-4-(hydroxyamino)-4-oxo-1-(5,6,7,8-tetrahydronaphthalen-2-yl)butan-2-yl]-1H-1,2,3-triazol-4-yl}ethyl]benzamide, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Liang, W.G, Deprez, R, Bosc, D, Tang, W.
Deposit date:2020-09-07
Release date:2021-09-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of human insulin degrading enzyme (IDE) in complex with compound 3
To Be Published
3F5P
DownloadVisualize
BU of 3f5p by Molmil
Complex Structure of Insulin-like Growth Factor Receptor and 3-Cyanoquinoline Inhibitor
Descriptor: 4-[[3-chloro-4-(1-methylimidazol-2-yl)sulfanyl-phenyl]amino]-7-[3-(2-hydroxyethyl-methyl-amino)propoxy]-6-methoxy-quinoline-3-carbonitrile, Insulin-like growth factor 1 receptor
Authors:Xu, W, Miller, L.M, Mayer, S.C, Berger, D.M, Boschelli, D.H, Boschelli, F.
Deposit date:2008-11-04
Release date:2008-12-30
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Lead identification to generate 3-cyanoquinoline inhibitors of insulin-like growth factor receptor (IGF-1R) for potential use in cancer treatment
Bioorg.Med.Chem.Lett., 19, 2009
6I4B
DownloadVisualize
BU of 6i4b by Molmil
Plasmodium falciparum dihydroorotate dehydrogenase (DHODH) co-crystallized with 3-Hydroxy-1-methyl-5-((3-(trifluoromethyl)phenoxy)methyl)-1H-pyrazole-4-carboxylic acid
Descriptor: 1-methyl-3-oxidanyl-5-[[3-(trifluoromethyl)phenoxy]methyl]pyrazole-4-carboxylic acid, Dihydroorotate dehydrogenase, FLAVIN MONONUCLEOTIDE, ...
Authors:Goyal, P, Sainas, S, Pippione, A.C, Boschi, D, Al-Kadaraghi, S.
Deposit date:2018-11-09
Release date:2018-12-19
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Hydroxyazole scaffold-based Plasmodium falciparum dihydroorotate dehydrogenase inhibitors: Synthesis, biological evaluation and X-ray structural studies.
Eur J Med Chem, 163, 2018

 

12>

227111

數據於2024-11-06公開中

PDB statisticsPDBj update infoContact PDBjnumon