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PDB: 155 results

3CT4
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BU of 3ct4 by Molmil
Structure of Dha-kinase subunit DhaK from L. Lactis
Descriptor: Dihydroxyacetone, PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit dhaK
Authors:Jeckelmann, J.M, Zurbriggen, A, Christen, S, Baumann, U, Erni, B.
Deposit date:2008-04-11
Release date:2008-10-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.498 Å)
Cite:X-ray Structures of the Three Lactococcus lactis Dihydroxyacetone Kinase Subunits and of a Transient Intersubunit Complex.
J.Biol.Chem., 283, 2008
7NUU
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BU of 7nuu by Molmil
Crystal structure of human AMDHD2 in complex with Zn
Descriptor: GLYCEROL, N-acetylglucosamine-6-phosphate deacetylase, ZINC ION
Authors:Ruegenberg, S, Kroef, V, Baumann, U, Denzel, M.S.
Deposit date:2021-03-14
Release date:2021-04-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.836 Å)
Cite:GFPT2/GFAT2 and AMDHD2 act in tandem to control the hexosamine pathway.
Elife, 11, 2022
7NUT
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BU of 7nut by Molmil
Crystal structure of human AMDHD2 in complex with Zn and GlcN6P
Descriptor: 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, N-acetylglucosamine-6-phosphate deacetylase, ZINC ION
Authors:Ruegenberg, S, Kroef, V, Baumann, U, Denzel, M.S.
Deposit date:2021-03-14
Release date:2021-04-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.898 Å)
Cite:GFPT2/GFAT2 and AMDHD2 act in tandem to control the hexosamine pathway.
Elife, 11, 2022
3CR3
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BU of 3cr3 by Molmil
Structure of a transient complex between Dha-kinase subunits DhaM and DhaL from Lactococcus lactis
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PTS-dependent dihydroxyacetone kinase, ...
Authors:Jeckelmann, J.M, Zurbriggen, A, Christen, S, Baumann, U, Erni, B.
Deposit date:2008-04-04
Release date:2008-10-21
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:X-ray Structures of the Three Lactococcus lactis Dihydroxyacetone Kinase Subunits and of a Transient Intersubunit Complex.
J.Biol.Chem., 283, 2008
7BFI
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BU of 7bfi by Molmil
A double-histidine mutant of HSP47 slows down client release at low pH
Descriptor: 15R8 collagen model peptide, Collagen-binding protein
Authors:Oecal, S, Baumann, U.
Deposit date:2021-01-03
Release date:2021-11-10
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Collagen's primary structure determines collagen:HSP47 complex stoichiometry.
J.Biol.Chem., 297, 2021
4WW0
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BU of 4ww0 by Molmil
Truncated FtsH from A. aeolicus
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent zinc metalloprotease FtsH, ZINC ION
Authors:Vostrukhina, M, Baumann, U, Schacherl, M, Bieniossek, C, Lanz, M, Baumgartner, R.
Deposit date:2014-11-09
Release date:2015-05-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.96 Å)
Cite:The structure of Aquifex aeolicus FtsH in the ADP-bound state reveals a C2-symmetric hexamer.
Acta Crystallogr.,Sect.D, 71, 2015
1W2W
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BU of 1w2w by Molmil
Crystal structure of yeast Ypr118w, a methylthioribose-1-phosphate isomerase related to regulatory eIF2B subunits
Descriptor: 5-METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE, SULFATE ION
Authors:Bumann, M, Djafarzadeh, S, Oberholzer, A.E, Bigler, P, Altmann, M, Trachsel, H, Baumann, U.
Deposit date:2004-07-09
Release date:2004-07-16
Last modified:2019-05-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structure of Yeast Ypr118W, a Methylthioribose-1-Phosphate Isomerase Related to Regulatory Eif2B Subunits
J.Biol.Chem., 279, 2004
1XFO
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BU of 1xfo by Molmil
Crystal Structure of an archaeal aminopeptidase
Descriptor: Frv operon protein FrvX, ZINC ION
Authors:Russo, S, Baumann, U.
Deposit date:2004-09-15
Release date:2004-10-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Crystal structure of a dodecameric tetrahedral shaped aminopeptidase
J.Biol.Chem., 279, 2004
5FYQ
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BU of 5fyq by Molmil
Sirt2 in complex with a 13-mer trifluoroacetylated Ran peptide
Descriptor: NAD-DEPENDENT PROTEIN DEACETYLASE SIRTUIN-2, RAN AA 31-43, SULFATE ION, ...
Authors:Knyphausen, P, de Boor, S, Scislowski, L, Extra, A, Baldus, L, Schacherl, M, Baumann, U, Neundorf, I, Lammers, M.
Deposit date:2016-03-09
Release date:2016-05-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:Insights Into Lysine-Deacetylation of Natively Folded Substrate Proteins by Sirtuins.
J.Biol.Chem., 291, 2016
1H5Q
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BU of 1h5q by Molmil
Mannitol dehydrogenase from Agaricus bisporus
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NADP-DEPENDENT MANNITOL DEHYDROGENASE, NICKEL (II) ION
Authors:Horer, S, Stoop, J, Mooibroek, H, Baumann, U, Sassoon, J.
Deposit date:2001-05-24
Release date:2001-06-21
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The Crystallographic Structure of the Mannitol 2-Dehydrogenase Nadp+ Binary Complex from Agaricus Bisporus
J.Biol.Chem., 276, 2001
6HMP
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BU of 6hmp by Molmil
Crystal structure of human Casein Kinase I delta in complex with a photoswitchable 2-Azoimidazole-based Inhibitor (compound 3)
Descriptor: 3-(2,5-dimethoxyphenyl)-~{N}-[4-[5-(4-fluorophenyl)-2-[(~{E})-(4-fluorophenyl)diazenyl]-3-methyl-imidazol-4-yl]pyridin-2-yl]propanamide, Casein kinase I isoform delta, PHOSPHATE ION
Authors:Pichlo, C, Schehr, M, Charl, J, Brunstein, E, Peifer, C, Baumann, U.
Deposit date:2018-09-12
Release date:2019-09-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.039 Å)
Cite:2-Azo-, 2-diazocine-thiazols and 2-azo-imidazoles as photoswitchable kinase inhibitors: limitations and pitfalls of the photoswitchable inhibitor approach.
Photochem. Photobiol. Sci., 18, 2019
6HMR
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BU of 6hmr by Molmil
Crystal structure of human Casein Kinase I delta in complex with a photoswitchable 2-Azothiazole-based inhibitor (compound 2)
Descriptor: 3-(2,5-dimethoxyphenyl)-~{N}-[4-[4-(4-fluorophenyl)-2-[(~{E})-phenyldiazenyl]-1,3-thiazol-5-yl]pyridin-2-yl]propanamide, Casein kinase I isoform delta, MALONIC ACID
Authors:Pichlo, C, Schehr, M, Charl, J, Brunstein, E, Peifer, C, Baumann, U.
Deposit date:2018-09-12
Release date:2019-09-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.782 Å)
Cite:2-Azo-, 2-diazocine-thiazols and 2-azo-imidazoles as photoswitchable kinase inhibitors: limitations and pitfalls of the photoswitchable inhibitor approach.
Photochem. Photobiol. Sci., 18, 2019
8ADD
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BU of 8add by Molmil
Viral tegument-like DUBs
Descriptor: ATP-dependent DNA helicase
Authors:Erven, I, Abraham, E.T, Hermanns, T, Hofmann, K, Baumann, U.
Deposit date:2022-07-08
Release date:2023-02-15
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A widely distributed family of eukaryotic and bacterial deubiquitinases related to herpesviral large tegument proteins.
Nat Commun, 13, 2022
2J83
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BU of 2j83 by Molmil
Ulilysin metalloprotease in complex with batimastat.
Descriptor: 4-(N-HYDROXYAMINO)-2R-ISOBUTYL-2S-(2-THIENYLTHIOMETHYL)SUCCINYL-L-PHENYLALANINE-N-METHYLAMIDE, CALCIUM ION, GLYCEROL, ...
Authors:Garcia-Castellanos, R, Tallant, C, Marrero, A, Sola, M, Baumann, U, Gomis-Ruth, F.X.
Deposit date:2006-10-18
Release date:2006-12-19
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Substrate Specificity of a Metalloprotease of the Pappalysin Family Revealed by an Inhibitor and a Product Complex.
Arch.Biochem.Biophys., 457, 2007
7NZY
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BU of 7nzy by Molmil
Crystal structure of human Casein Kinase I delta in complex with CGS-15943
Descriptor: 9-chloranyl-2-(furan-2-yl)-[1,2,4]triazolo[1,5-c]quinazolin-5-amine, Casein kinase I isoform delta, MALONATE ION, ...
Authors:Pichlo, C, Baumann, U.
Deposit date:2021-03-24
Release date:2022-10-05
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Phenotypic Discovery of Triazolo[1,5- c ]quinazolines as a First-In-Class Bone Morphogenetic Protein Amplifier Chemotype.
J.Med.Chem., 65, 2022
5FR2
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BU of 5fr2 by Molmil
Farnesylated RhoA-GDP in complex with RhoGDI-alpha, lysine acetylated at K178
Descriptor: FARNESYL, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Kuhlmann, N, Wroblowski, S, Knyphausen, P, de Boor, S, Brenig, J, Zienert, A.Y, Meyer-Teschendorf, K, Praefcke, G.J.K, Nolte, H, Krueger, M, Schacherl, M, Baumann, U, James, L.C, Chin, J.W, Lammers, M.
Deposit date:2015-12-15
Release date:2016-01-13
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Structural and Mechanistic Insights Into the Regulation of the Fundamental Rho-Regulator Rhogdi Alpha by Lysine Acetylation.
J.Biol.Chem., 291, 2016
5G5R
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BU of 5g5r by Molmil
CBS domain tandem of site-2 protease from Archaeoglobus fulgidus in complex with llama Nanobody - apo form
Descriptor: NANOBODY, SITE-2 PROTEASE, SULFATE ION
Authors:Schacherl, M, Baumann, U.
Deposit date:2016-06-02
Release date:2017-05-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystallographic and biochemical characterization of the dimeric architecture of site-2 protease.
Biochim. Biophys. Acta, 1859, 2017
5G5X
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BU of 5g5x by Molmil
CBS domain tandem of site-2 protease from Archaeoglobus fulgidus in complex with llama Nanobody - nucleotide-bound form
Descriptor: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, NANOBODY, ...
Authors:Schacherl, M, Baumann, U.
Deposit date:2016-06-09
Release date:2017-05-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystallographic and biochemical characterization of the dimeric architecture of site-2 protease.
Biochim. Biophys. Acta, 1859, 2017
6ZMJ
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BU of 6zmj by Molmil
Crystal structure of human GFAT-1 R203H
Descriptor: GLUCOSE-6-PHOSPHATE, GLUTAMIC ACID, Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1
Authors:Ruegenberg, S, Mayr, F, Miethe, S, Atanassov, I, Baumann, U, Denzel, M.S.
Deposit date:2020-07-02
Release date:2020-08-05
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.774 Å)
Cite:Protein kinase A controls the hexosamine pathway by tuning the feedback inhibition of GFAT-1.
Nat Commun, 12, 2021
6ZMK
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BU of 6zmk by Molmil
Crystal structure of human GFAT-1 L405R
Descriptor: GLUCOSE-6-PHOSPHATE, GLUTAMIC ACID, Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1
Authors:Ruegenberg, S, Mayr, F, Miethe, S, Atanassov, I, Baumann, U, Denzel, M.S.
Deposit date:2020-07-02
Release date:2020-08-05
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.382 Å)
Cite:Protein kinase A controls the hexosamine pathway by tuning the feedback inhibition of GFAT-1.
Nat Commun, 12, 2021
2WQD
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BU of 2wqd by Molmil
Crystal structure of enzyme I of the phosphoenolpyruvate:sugar phosphotransferase system in the dephosphorylated state
Descriptor: CALCIUM ION, PHOSPHOENOLPYRUVATE-PROTEIN PHOSPHOTRANSFERASE
Authors:Oberholzer, A.E, Schneider, P, Siebold, C, Baumann, U, Erni, B.
Deposit date:2009-08-19
Release date:2009-10-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of Enzyme I of the Phosphoenolpyruvate:Sugar Phosphotransferase System in the Dephosphorylated State.
J.Biol.Chem., 284, 2009
8CMR
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BU of 8cmr by Molmil
Linear specific OTU-type DUB SnOTU from the pathogen S. negenvensis in complex with linear di-ubiquitin
Descriptor: OTU domain-containing protein, Polyubiquitin-B
Authors:Uthoff, M, Hermanns, T, Boll, V, Hofmann, K, Baumann, U.
Deposit date:2023-02-21
Release date:2023-11-22
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Functional and structural diversity in deubiquitinases of the Chlamydia-like bacterium Simkania negevensis.
Nat Commun, 14, 2023
2CE7
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BU of 2ce7 by Molmil
EDTA treated
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CELL DIVISION PROTEIN FTSH, MAGNESIUM ION, ...
Authors:Bieniossek, C, Baumann, U.
Deposit date:2006-02-03
Release date:2006-02-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:The Molecular Architecture of the Metalloprotease Ftsh.
Proc.Natl.Acad.Sci.USA, 103, 2006
2CKI
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BU of 2cki by Molmil
Structure of Ulilysin, a member of the pappalysin family of metzincin metalloendopeptidases.
Descriptor: ARGININE, CALCIUM ION, GLYCEROL, ...
Authors:Tallant, C, Garcia-Castellanos, R, Seco, J, Baumann, U, Gomis-Ruth, F.X.
Deposit date:2006-04-19
Release date:2006-05-09
Last modified:2019-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Molecular Analysis of Ulilysin, the Structural Prototype of a New Family of Metzincin Metalloproteases.
J.Biol.Chem., 281, 2006
2CEA
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BU of 2cea by Molmil
CELL DIVISION PROTEIN FTSH
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CELL DIVISION PROTEIN FTSH, MAGNESIUM ION, ...
Authors:Bieniossek, C, Baumann, U.
Deposit date:2006-02-03
Release date:2006-02-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:The Molecular Architecture of the Metalloprotease Ftsh.
Proc.Natl.Acad.Sci.USA, 103, 2006

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