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PDB: 350 results

2BZG
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BU of 2bzg by Molmil
Crystal structure of thiopurine S-methyltransferase.
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, S-ADENOSYL-L-HOMOCYSTEINE, THIOPURINE S-METHYLTRANSFERASE
Authors:Battaile, K.P, Wu, H, Zeng, H, Loppnau, P, Dong, A, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
Deposit date:2005-08-17
Release date:2005-08-25
Last modified:2019-05-15
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Structural Basis of Allele Variation of Human Thiopurine-S-Methyltransferase.
Proteins, 67, 2007
1RX0
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BU of 1rx0 by Molmil
Crystal structure of isobutyryl-CoA dehydrogenase complexed with substrate/ligand.
Descriptor: 1,2-ETHANEDIOL, ACETIC ACID, Acyl-CoA dehydrogenase family member 8, ...
Authors:Battaile, K.P, Nguyen, T.V, Vockley, J, Kim, J.J.
Deposit date:2003-12-18
Release date:2004-04-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structures of Isobutyryl-CoA Dehydrogenase and Enzyme-Product Complex: COMPARISON WITH ISOVALERYL- AND SHORT-CHAIN ACYL-COA DEHYDROGENASES.
J.Biol.Chem., 279, 2004
1JQI
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BU of 1jqi by Molmil
Crystal Structure of Rat Short Chain Acyl-CoA Dehydrogenase Complexed With Acetoacetyl-CoA
Descriptor: ACETOACETYL-COENZYME A, FLAVIN-ADENINE DINUCLEOTIDE, short chain acyl-CoA dehydrogenase
Authors:Battaile, K.P, Molin-Case, J, Paschke, R, Wang, M, Bennett, D, Vockley, J, Kim, J.-J.P.
Deposit date:2001-08-07
Release date:2002-02-13
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of rat short chain acyl-CoA dehydrogenase complexed with acetoacetyl-CoA: comparison with other acyl-CoA dehydrogenases.
J.Biol.Chem., 277, 2002
5KEF
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BU of 5kef by Molmil
Structure of hypothetical Staphylococcus protein SA0856 with zinc
Descriptor: ACETATE ION, PhnB protein, ZINC ION
Authors:Battaile, K.P, Chirgadze, Y.N, Lam, R, Chan, T, Mihajlovic, V, Romanov, V, Pai, E, Mendez, V, Chirgadze, N.Y.
Deposit date:2016-06-09
Release date:2017-01-18
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Crystal structure of Staphylococcus aureus Zn-glyoxalase I: new subfamily of glyoxalase I family.
J. Biomol. Struct. Dyn., 36, 2018
4PAU
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BU of 4pau by Molmil
Hypothetical protein SA1058 from S. aureus.
Descriptor: CHLORIDE ION, Nitrogen regulatory protein A
Authors:Battaile, K.P, Wu-Brown, J, Romanov, V, Jones, K, Lam, R, Pai, E.F, Chirgadze, N.Y.
Deposit date:2014-04-10
Release date:2015-05-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Hypothetical protein SA1058 from S. aureus.
To Be Published
4P13
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BU of 4p13 by Molmil
Medium chain acyl-CoA dehydrogenase, K304E mutant
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Medium-chain specific acyl-CoA dehydrogenase, mitochondrial
Authors:Battaile, K.P, Mohsen, A.-W, Vockley, J.
Deposit date:2014-02-24
Release date:2015-03-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Medium chain acyl-CoA dehydrogenase, K304E mutant
To Be Published
4PAW
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BU of 4paw by Molmil
Structure of hypothetical protein HP1257.
Descriptor: Orotate phosphoribosyltransferase, PHOSPHATE ION, THIOCYANATE ION, ...
Authors:Battaile, K.P, Lam, R, Lam, K, Romanov, V, Jones, K, Soloveychik, M, Pai, E.F, Chirgadze, N.Y.
Deposit date:2014-04-10
Release date:2015-05-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Structure of hypothetical protein HP1257.
To Be Published
4PAV
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BU of 4pav by Molmil
Structure of hypothetical protein SA1046 from S. aureus.
Descriptor: Glyoxalase family protein
Authors:Battaile, K.P, Mulichak, A, Lam, R, Lam, K, Soloveychik, M, Romanov, V, Jones, K, Pai, E.F, Chirgadze, N.Y.
Deposit date:2014-04-10
Release date:2015-05-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of hypothetical protein SA1046 from S. aureus.
To Be Published
7KEY
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BU of 7key by Molmil
Protein Tyrosine Phosphatase 1B, Apo
Descriptor: ACETATE ION, MAGNESIUM ION, Tyrosine-protein phosphatase non-receptor type 1
Authors:Battaile, K.P, Chirgadze, Y, Ruzanov, M, Romanov, V, Lam, K, Gordon, R, Lin, A, Lam, R, Pai, E, Chirgadze, N.
Deposit date:2020-10-13
Release date:2022-01-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.771 Å)
Cite:Signal transfer in human protein tyrosine phosphatase PTP1B from allosteric inhibitor P00058.
J.Biomol.Struct.Dyn., 2021
7KLX
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BU of 7klx by Molmil
Protein Tyrosine Phosphatase 1B with inhibitor
Descriptor: 2-(2,5-dimethyl-1H-pyrrol-1-yl)-5-hydroxybenzoic acid, MAGNESIUM ION, Tyrosine-protein phosphatase non-receptor type 1
Authors:Battaile, K.P, Chirgadze, Y, Ruzanov, M, Romanov, V, Lam, K, Gordon, R, Lin, A, Lam, R, Pai, E, Chirgadze, N.
Deposit date:2020-11-01
Release date:2022-01-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.839 Å)
Cite:Signal transfer in human protein tyrosine phosphatase PTP1B from allosteric inhibitor P00058.
J.Biomol.Struct.Dyn., 2021
6XMK
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BU of 6xmk by Molmil
1.70 A resolution structure of SARS-CoV-2 3CL protease in complex with inhibitor 7j
Descriptor: (1S,2S)-2-[(N-{[(4,4-difluorocyclohexyl)methoxy]carbonyl}-L-leucyl)amino]-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, 3C-like proteinase, TETRAETHYLENE GLYCOL
Authors:Lovell, S, Kashipathy, M.M, Battaile, K.P, Rathnayake, A.D, Zheng, J, Kim, Y, Nguyen, H.N, Chang, K.O, Groutas, W.C.
Deposit date:2020-06-30
Release date:2020-07-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:3C-like protease inhibitors block coronavirus replication in vitro and improve survival in MERS-CoV-infected mice.
Sci Transl Med, 12, 2020
6MAB
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BU of 6mab by Molmil
1.7A resolution structure of RsbU from Chlamydia trachomatis (periplasmic domain)
Descriptor: ISOPROPYL ALCOHOL, Sigma regulatory family protein-PP2C phosphatase
Authors:Dmitriev, A, Lovell, S, Battaile, K.P, Soules, K, Hefty, P.S.
Deposit date:2018-08-27
Release date:2019-09-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and ligand binding analyses of the periplasmic sensor domain of RsbU in Chlamydia trachomatis support a role in TCA cycle regulation.
Mol.Microbiol., 113, 2020
7RT0
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BU of 7rt0 by Molmil
1.80 A resolution structure of MAO from P. nicotinovorans in complex with FAD
Descriptor: 4-methylaminobutanoate oxidase (methylamine-forming), FLAVIN-ADENINE DINUCLEOTIDE, TETRAETHYLENE GLYCOL
Authors:Lovell, S, Bowman, A, Battaile, K.P, Deay, D.O.
Deposit date:2021-08-12
Release date:2021-08-25
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:To be determined
To be published
3D7R
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BU of 3d7r by Molmil
Crystal structure of a putative esterase from Staphylococcus aureus
Descriptor: BROMIDE ION, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Lam, R, Battaile, K.P, Chan, T, Romanov, V, Lam, K, Soloveychik, M, Wu-Brown, J, Pai, E.F, Chirgadze, N.Y.
Deposit date:2008-05-21
Release date:2009-06-09
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Crystal structure of a putative esterase from Staphylococcus aureus
To be Published
6DV2
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BU of 6dv2 by Molmil
Crystal Structure of Human Mitochondrial Trifunctional Protein
Descriptor: Trifunctional enzyme subunit alpha, mitochondrial, Trifunctional enzyme subunit beta
Authors:Fu, Z, Xia, C, Battaile, K.P, Kim, J.P.
Deposit date:2018-06-22
Release date:2018-09-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Crystal structure of human mitochondrial trifunctional protein, a fatty acid beta-oxidation metabolon.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6E6S
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BU of 6e6s by Molmil
1.45 A resolution structure of the C-terminally truncated [2Fe-2S] ferredoxin (Bfd) R26E/K46Y mutant from Pseudomonas aeruginosa
Descriptor: Bacterioferritin-associated ferredoxin, FE2/S2 (INORGANIC) CLUSTER
Authors:Lovell, S, Wijerathne, H, Battaile, K.P, Yao, H, Wang, Y, Rivera, M.
Deposit date:2018-07-25
Release date:2018-09-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Bfd, a New Class of [2Fe-2S] Protein That Functions in Bacterial Iron Homeostasis, Requires a Structural Anion Binding Site.
Biochemistry, 57, 2018
3E2I
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BU of 3e2i by Molmil
Crystal structure of Thymidine Kinase from S. aureus
Descriptor: GLYCEROL, Thymidine kinase, ZINC ION
Authors:Lam, R, Johns, K, Battaile, K.P, Romanov, V, Lam, K, Pai, E.F, Chirgadze, N.Y.
Deposit date:2008-08-05
Release date:2009-08-11
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Crystal structure of Thymidine Kinase from S. aureus
To be Published
3GPH
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BU of 3gph by Molmil
Human cytochrome P450 2E1 in complex with omega-imidazolyl-decanoic acid
Descriptor: 10-(1H-imidazol-1-yl)decanoic acid, Cytochrome P450 2E1, PROTOPORPHYRIN IX CONTAINING FE
Authors:Porubsky, P.R, Battaile, K.P, Scott, E.E.
Deposit date:2009-03-23
Release date:2010-05-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Human cytochrome P450 2E1 structures with fatty acid analogs reveal a previously unobserved binding mode.
J.Biol.Chem., 285, 2010
6E6Q
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BU of 6e6q by Molmil
1.20 A resolution structure of the C-terminally truncated [2Fe-2S] ferredoxin (Bfd) from Pseudomonas aeruginosa
Descriptor: Bacterioferritin-associated ferredoxin, FE2/S2 (INORGANIC) CLUSTER
Authors:Lovell, S, Wijerathne, H, Battaile, K.P, Yao, H, Wang, Y, Rivera, M.
Deposit date:2018-07-25
Release date:2018-09-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Bfd, a New Class of [2Fe-2S] Protein That Functions in Bacterial Iron Homeostasis, Requires a Structural Anion Binding Site.
Biochemistry, 57, 2018
6E6R
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BU of 6e6r by Molmil
1.50 A resolution structure of the C-terminally truncated [2Fe-2S] ferredoxin (Bfd) R26E mutant from Pseudomonas aeruginosa
Descriptor: Bacterioferritin-associated ferredoxin, FE2/S2 (INORGANIC) CLUSTER
Authors:Lovell, S, Wijerathne, H, Battaile, K.P, Yao, H, Wang, Y, Rivera, M.
Deposit date:2018-07-25
Release date:2018-09-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Bfd, a New Class of [2Fe-2S] Protein That Functions in Bacterial Iron Homeostasis, Requires a Structural Anion Binding Site.
Biochemistry, 57, 2018
3MOM
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BU of 3mom by Molmil
Structure of holo HasAp H32A mutant complexed with imidazole from Pseudomonas aeruginosa to 2.25A Resolution
Descriptor: Heme acquisition protein HasAp, IMIDAZOLE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Lovell, S, Battaile, K.P, Jepkorir, G, Rodriguez, J.C, Rui, H, Im, W, Alontaga, A.Y, Yukl, E, Moenne-Loccoz, P, Rivera, M.
Deposit date:2010-04-22
Release date:2010-07-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural, NMR Spectroscopic, and Computational Investigation of Hemin Loading in the Hemophore HasAp from Pseudomonas aeruginosa.
J.Am.Chem.Soc., 132, 2010
3MHZ
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BU of 3mhz by Molmil
1.7A structure of 2-fluorohistidine labeled Protective Antigen
Descriptor: CALCIUM ION, Protective antigen, TETRAETHYLENE GLYCOL
Authors:Lovell, S, Battaile, K.P, Wimalasena, D.S, Janowiak, B.E, Miyagi, M, Sun, J, Hajduch, J, Pooput, C, Kirk, K.L, Bann, J.G.
Deposit date:2010-04-09
Release date:2010-08-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Evidence that histidine protonation of receptor-bound anthrax protective antigen is a trigger for pore formation.
Biochemistry, 49, 2010
3MOL
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BU of 3mol by Molmil
Structure of dimeric holo HasAp H32A Mutant from Pseudomonas aeruginosa to 1.20A Resolution
Descriptor: Heme acquisition protein HasAp, PROTOPORPHYRIN IX CONTAINING FE
Authors:Lovell, S, Battaile, K.P, Jepkorir, G, Rodriguez, J.C, Rui, H, Im, W, Alontaga, A.Y, Yukl, E, Moenne-Loccoz, P, Rivera, M.
Deposit date:2010-04-22
Release date:2010-07-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural, NMR Spectroscopic, and Computational Investigation of Hemin Loading in the Hemophore HasAp from Pseudomonas aeruginosa.
J.Am.Chem.Soc., 132, 2010
7K7E
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BU of 7k7e by Molmil
Crystal structure of diphtheria toxin from crystals obtained at pH 7.0
Descriptor: Diphtheria toxin
Authors:Lovell, S, Kashipathy, M.M, Battaile, K.P, Rodnin, M.V, Ladokhin, A.S.
Deposit date:2020-09-22
Release date:2020-11-18
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the Diphtheria Toxin at Acidic pH: Implications for the Conformational Switching of the Translocation Domain.
Toxins, 12, 2020
7K0F
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BU of 7k0f by Molmil
1.65 A resolution structure of SARS-CoV-2 3CL protease in complex with a deuterated GC376 alpha-ketoamide analog (compound 5)
Descriptor: 3C-like proteinase, N-{(2S,3R)-4-(benzylamino)-3-hydroxy-4-oxo-1-[(3S)-2-oxopyrrolidin-3-yl]butan-2-yl}-N~2~-[(benzyloxy)carbonyl]-L-leucinamide, TETRAETHYLENE GLYCOL
Authors:Lovell, S, Kashipathy, M.M, Battaile, K.P, Chamandi, S.D, Nguyen, H.N, Kim, Y, Chang, K.O, Groutas, W.C.
Deposit date:2020-09-04
Release date:2021-01-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Postinfection treatment with a protease inhibitor increases survival of mice with a fatal SARS-CoV-2 infection.
Proc.Natl.Acad.Sci.USA, 118, 2021

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PDB entries from 2024-07-17

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