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PDB: 4046 件

5IY6
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Human holo-PIC in the closed state
分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB10, DNA-directed RNA polymerase II subunit RPB11-a, ...
著者He, Y, Yan, C, Fang, J, Inouye, C, Tjian, R, Ivanov, I, Nogales, E.
登録日2016-03-24
公開日2016-05-18
最終更新日2019-11-20
実験手法ELECTRON MICROSCOPY (7.2 Å)
主引用文献Near-atomic resolution visualization of human transcription promoter opening.
Nature, 533, 2016
7KX5
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Crystal structure of the SARS-CoV-2 (COVID-19) main protease in complex with noncovalent inhibitor Jun8-76-3A
分子名称: 3C-like proteinase, GLYCEROL, N-([1,1'-biphenyl]-4-yl)-N-[(1R)-2-oxo-2-{[(1S)-1-phenylethyl]amino}-1-(pyridin-3-yl)ethyl]furan-2-carboxamide
著者Sacco, M, Wang, J, Chen, Y.
登録日2020-12-03
公開日2020-12-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Discovery of Di- and Trihaloacetamides as Covalent SARS-CoV-2 Main Protease Inhibitors with High Target Specificity.
J.Am.Chem.Soc., 143, 2021
3SIQ
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Crystal Structure of autoinhibited dIAP1-BIR1 domain
分子名称: Apoptosis 1 inhibitor, ZINC ION
著者Li, X, Wang, J, Shi, Y.
登録日2011-06-20
公開日2011-08-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural mechanisms of DIAP1 auto-inhibition and DIAP1-mediated inhibition of drICE.
Nat Commun, 2, 2011
5IY9
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Human holo-PIC in the initial transcribing state (no IIS)
分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB10, DNA-directed RNA polymerase II subunit RPB11-a, ...
著者He, Y, Yan, C, Fang, J, Inouye, C, Tjian, R, Ivanov, I, Nogales, E.
登録日2016-03-24
公開日2016-05-18
最終更新日2019-11-20
実験手法ELECTRON MICROSCOPY (6.3 Å)
主引用文献Near-atomic resolution visualization of human transcription promoter opening.
Nature, 533, 2016
4MRN
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BU of 4mrn by Molmil
Structure of a bacterial Atm1-family ABC transporter
分子名称: ABC transporter related protein, LAURYL DIMETHYLAMINE-N-OXIDE, PHOSPHATE ION
著者Lee, J.Y, Yang, J.G, Zhitnitsky, D, Lewinson, O, Rees, D.C.
登録日2013-09-17
公開日2014-03-19
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis for heavy metal detoxification by an Atm1-type ABC exporter.
Science, 343, 2014
4DG3
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BU of 4dg3 by Molmil
Crystal structure of R336A mutant of cAMP-dependent protein kinase with unphosphorylated turn motif.
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, cAMP-dependent protein kinase catalytic subunit alpha, ...
著者Steichen, J.M, Yang, J, Taylor, S.S.
登録日2012-01-24
公開日2013-02-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Turn motif phosphorylation regulates processing of cAMP-dependent protein kinase
To be Published
2MUW
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BU of 2muw by Molmil
NOE-based model of the influenza A virus N31S mutant (19-49) bound to drug 11
分子名称: (3s,5s,7s)-N-[(5-bromothiophen-2-yl)methyl]tricyclo[3.3.1.1~3,7~]decan-1-aminium, Matrix protein 2
著者Wu, Y, Wang, J, DeGrado, W.
登録日2014-09-18
公開日2014-12-24
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Flipping in the Pore: Discovery of Dual Inhibitors That Bind in Different Orientations to the Wild-Type versus the Amantadine-Resistant S31N Mutant of the Influenza A Virus M2 Proton Channel.
J.Am.Chem.Soc., 136, 2014
2MZZ
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NMR structure of APOBEC3G NTD variant, sNTD
分子名称: Apolipoprotein B mRNA-editing enzyme, catalytic polypeptide-like 3G variant, ZINC ION
著者Kouno, T, Luengas, E.M, Shigematu, M, Shandilya, S.M.D, Zhang, J, Chen, L, Hara, M, Schiffer, C.A, Harris, R.S, Matsuo, H.
登録日2015-02-28
公開日2015-05-13
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure of the Vif-binding domain of the antiviral enzyme APOBEC3G.
Nat.Struct.Mol.Biol., 22, 2015
5NR6
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NMR structure and 1H, 13C and 15N signal assignments for Dictyostelium discoidans MATB protein S71A mutant
分子名称: MatB protein
著者Neuhaus, D, Hedgethorne, K, Yang, J.-C.
登録日2017-04-22
公開日2017-09-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Homeodomain-like DNA binding proteins control the haploid-to-diploid transition in Dictyostelium.
Sci Adv, 3, 2017
7V47
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Type 1A alpha-synuclein fibril seeded by cerebrospinal fluid from a preclinical Parkinson's disease patient
分子名称: Alpha-synuclein
著者Fan, Y, Sun, Y.P, Wang, J, Liu, C.
登録日2021-08-12
公開日2022-08-17
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Conformational change of alpha-synuclein fibrils in cerebrospinal fluid from different clinical phases of Parkinson's disease.
Structure, 31, 2023
5IY7
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BU of 5iy7 by Molmil
Human holo-PIC in the open state
分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB10, DNA-directed RNA polymerase II subunit RPB11-a, ...
著者He, Y, Yan, C, Fang, J, Inouye, C, Tjian, R, Ivanov, I, Nogales, E.
登録日2016-03-24
公開日2016-05-18
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (8.6 Å)
主引用文献Near-atomic resolution visualization of human transcription promoter opening.
Nature, 533, 2016
7V48
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BU of 7v48 by Molmil
Type 1D alpha-synuclein fibril seeded by cerebrospinal fluid from a postmortal Parkinson's disease patient
分子名称: Alpha-synuclein
著者Fan, Y, Sun, Y.P, Wang, J, Liu, C.
登録日2021-08-12
公開日2022-08-17
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Conformational change of alpha-synuclein fibrils in cerebrospinal fluid from different clinical phases of Parkinson's disease.
Structure, 31, 2023
5IYB
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BU of 5iyb by Molmil
Human core-PIC in the open state
分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB10, DNA-directed RNA polymerase II subunit RPB11-a, ...
著者He, Y, Yan, C, Fang, J, Inouye, C, Tjian, R, Ivanov, I, Nogales, E.
登録日2016-03-24
公開日2016-05-18
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Near-atomic resolution visualization of human transcription promoter opening.
Nature, 533, 2016
7V49
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BU of 7v49 by Molmil
Type 4 alpha-synuclein fibril seeded by cerebrospinal fluid from a postmortal Parkinson's disease patient
分子名称: Alpha-synuclein
著者Fan, Y, Sun, Y.P, Wang, J, Liu, C.
登録日2021-08-12
公開日2022-08-17
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Conformational change of alpha-synuclein fibrils in cerebrospinal fluid from different clinical phases of Parkinson's disease.
Structure, 31, 2023
5IYD
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BU of 5iyd by Molmil
Human core-PIC in the initial transcribing state (no IIS)
分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB10, DNA-directed RNA polymerase II subunit RPB11-a, ...
著者He, Y, Yan, C, Fang, J, Inouye, C, Tjian, R, Ivanov, I, Nogales, E.
登録日2016-03-24
公開日2016-05-18
最終更新日2019-11-20
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Near-atomic resolution visualization of human transcription promoter opening.
Nature, 533, 2016
4R0X
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BU of 4r0x by Molmil
Allosteric coupling of conformational transitions in the FK1 domain of FKBP51 near the site of steroid receptor interaction
分子名称: Peptidyl-prolyl cis-trans isomerase FKBP5
著者LeMaster, D.M, Mustafi, S.M, Brecher, M, Zhang, J, Heroux, A, Li, H.M, Hernandez, G.
登録日2014-08-02
公開日2015-05-13
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Coupling of Conformational Transitions in the N-terminal Domain of the 51-kDa FK506-binding Protein (FKBP51) Near Its Site of Interaction with the Steroid Receptor Proteins.
J.Biol.Chem., 290, 2015
3S0Z
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BU of 3s0z by Molmil
Crystal structure of New Delhi Metallo-beta-lactamase (NDM-1)
分子名称: Metallo-beta-lactamase, ZINC ION
著者Guo, Y, Wang, J, Niu, G.J, Shui, W.Q, Sun, Y.N, Lou, Z.Y, Rao, Z.H.
登録日2011-05-13
公開日2011-06-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A structural view of the antibiotic degradation enzyme NDM-1 from a superbug.
Protein Cell, 2011
4MRS
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BU of 4mrs by Molmil
Structure of a bacterial Atm1-family ABC transporter
分子名称: ABC transporter related protein, LAURYL DIMETHYLAMINE-N-OXIDE, OXIDIZED GLUTATHIONE DISULFIDE, ...
著者Lee, J.Y, Yang, J.G, Zhitnitsky, D, Lewinson, O, Rees, D.C.
登録日2013-09-17
公開日2014-03-19
最終更新日2019-07-17
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural basis for heavy metal detoxification by an Atm1-type ABC exporter.
Science, 343, 2014
4MSU
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BU of 4msu by Molmil
Human GKRP bound to AMG-6861 and Sorbitol-6-phosphate
分子名称: 1,1,1,3,3,3-hexafluoro-2-{4-[4-(thiophen-2-ylsulfonyl)piperazin-1-yl]phenyl}propan-2-ol, D-SORBITOL-6-PHOSPHATE, GLYCEROL, ...
著者Ashton, K.S, Andrews, K.L, Bryan, M.C, Chen, J, Chen, K, Chen, M, Chmait, S, Croghan, M, Cupples, R, Fotsch, C, Helmering, J, Jordan, S.R, Kurzeja, R.J, Michelsen, K, Pennington, L.D, Poon, S.F, Sivits, G, Van, G, Vonderfecht, S.L, Wahl, R.C, Zhang, J, Lloyd, D.J, Hale, C, St Jean, D.J.
登録日2013-09-18
公開日2014-03-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Small Molecule Disruptors of the Glucokinase-Glucokinase Regulatory Protein Interaction: 1. Discovery of a Novel Tool Compound for in Vivo Proof-of-Concept.
J.Med.Chem., 57, 2014
3RWU
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BU of 3rwu by Molmil
RB69 DNA Polymerase (Y567A) Ternary Complex with dATP Opposite Difluorotoluene Nucleoside
分子名称: 5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*(DOC))-3', 5'-D(*TP*CP*GP*(DFT)P*GP*TP*AP*AP*GP*CP*AP*GP*TP*CP*CP*GP*CP*G)-3', ADENOSINE-5'-TRIPHOSPHATE, ...
著者Xia, S, Konigsberg, W.H, Wang, J.
登録日2011-05-09
公開日2011-06-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Hydrogen-Bonding Capability of a Templating Difluorotoluene Nucleotide Residue in an RB69 DNA Polymerase Ternary Complex.
J.Am.Chem.Soc., 133, 2011
4FG7
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Crystal structure of human calcium/calmodulin-dependent protein kinase I 1-293 in complex with ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Calcium/calmodulin-dependent protein kinase type 1
著者Zha, M, Zhong, C, Ou, Y, Wang, J, Han, L, Ding, J.
登録日2012-06-04
公開日2013-01-23
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structures of human CaMKIalpha reveal insights into the regulation mechanism of CaMKI.
Plos One, 7, 2012
4FJN
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BU of 4fjn by Molmil
RB69 DNA polymerase ternary complex with dTTP/dA
分子名称: CALCIUM ION, DNA polymerase, DNA primer, ...
著者Xia, S, Wang, J, Konigsberg, W.H.
登録日2012-06-11
公開日2012-12-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献DNA mismatch synthesis complexes provide insights into base selectivity of a B family DNA polymerase.
J.Am.Chem.Soc., 135, 2013
3JAZ
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BU of 3jaz by Molmil
Atomic model of cytoplasmic polyhedrosis virus with ATP
分子名称: Capsid protein VP1, Structural protein VP3, Viral structural protein 5
著者Yu, X.K, Jiang, J.S, Sun, J.C, Zhou, Z.H.
登録日2015-07-06
公開日2015-08-12
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献A putative ATPase mediates RNA transcription and capping in a dsRNA virus.
Elife, 4, 2015
5YTD
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large fragment of DNA Polymerase I from Thermus aquaticus in a closed ternary complex with the natural base pair 5fC:dGTP
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*AP*AP*AP*(5FC)P*GP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3'), DNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*(DOC))-3'), ...
著者Zeng, H, Mondal, M, Song, R.Y, Zhang, J, Xia, B, Gao, Y.Q, Yi, C.Q.
登録日2017-11-17
公開日2018-11-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Unnatural Cytosine Bases Recognized as Thymines by DNA Polymerases by the Formation of the Watson-Crick Geometry.
Angew. Chem. Int. Ed. Engl., 58, 2019
3ZON
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BU of 3zon by Molmil
Human TYK2 pseudokinase domain bound to a kinase inhibitor
分子名称: 5-PHENYL-2-UREIDOTHIOPHENE-3-CARBOXAMIDE, NON-RECEPTOR TYROSINE-PROTEIN KINASE TYK2
著者Elkins, J.M, Wang, J, Krojer, T, Savitsky, P, Chalk, R, Daga, N, Salah, E, Berridge, G, Picaud, S, von Delft, F, Bountra, C, Edwards, A, Knapp, S.
登録日2013-02-22
公開日2013-04-10
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Human Tyk2 Pseudokinase Domain Bound to a Kinase Inhibitor
To be Published

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件を2024-07-10に公開中

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