Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 88608 results

7TFE
DownloadVisualize
BU of 7tfe by Molmil
L. monocytogenes GS(12) - apo
Descriptor: Glutamine synthetase, MAGNESIUM ION
Authors:Travis, B.A, Peck, J, Schumacher, M.A.
Deposit date:2022-01-06
Release date:2022-06-29
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Molecular dissection of the glutamine synthetase-GlnR nitrogen regulatory circuitry in Gram-positive bacteria.
Nat Commun, 13, 2022
7T1L
DownloadVisualize
BU of 7t1l by Molmil
Crystal structure of a superbinder Fes SH2 domain (sFesS) in complex with a high affinity phosphopeptide
Descriptor: CHLORIDE ION, SODIUM ION, Synthetic phosphotyrosine-containing Ezrin-derived peptide, ...
Authors:Martyn, G.D, Singer, A.U, Veggiani, G, Kurinov, I, Sicheri, F, Sidhu, S.S.
Deposit date:2021-12-02
Release date:2022-08-24
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Engineered SH2 Domains for Targeted Phosphoproteomics.
Acs Chem.Biol., 17, 2022
7TEP
DownloadVisualize
BU of 7tep by Molmil
Crystal structure of a Cu-bound cytochrome cb562 variant in the presence of reductant
Descriptor: COPPER (II) ION, HEME C, Soluble cytochrome b562
Authors:Kakkis, A, Golub, E.
Deposit date:2022-01-05
Release date:2022-06-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Redox- and metal-directed structural diversification in designed metalloprotein assemblies.
Chem.Commun.(Camb.), 58, 2022
2IXS
DownloadVisualize
BU of 2ixs by Molmil
Structure of SdaI restriction endonuclease
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, SDAI RESTRICTION ENDONUCLEASE, ...
Authors:Tamulaitiene, G, Jakubauskas, A, Urbanke, C, Huber, R, Grazulis, S, Siksnys, V.
Deposit date:2006-07-11
Release date:2006-09-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Crystal Structure of the Rare-Cutting Restriction Enzyme Sdai Reveals Unexpected Domain Architecture
Structure, 14, 2006
2IOA
DownloadVisualize
BU of 2ioa by Molmil
E. coli Bifunctional glutathionylspermidine synthetase/amidase Incomplex with Mg2+ and ADP and phosphinate inhibitor
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Bifunctional glutathionylspermidine synthetase/amidase, D-GAMMA-GLUTAMYL-N-{[(R)-{4-[(4-AMINOBUTYL)AMINO]BUTYL}(PHOSPHONOOXY)PHOSPHORYL]METHYL}-D-ALANINAMIDE, ...
Authors:Pai, C.H, Chiang, B.Y, Ko, T.P, Chou, C.C, Chong, C.M, Yen, F.J, Coward, J.K, Wang, A.H.-J, Lin, C.H.
Deposit date:2006-10-10
Release date:2006-12-12
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Dual binding sites for translocation catalysis by Escherichia coli glutathionylspermidine synthetase
Embo J., 25, 2006
6J7W
DownloadVisualize
BU of 6j7w by Molmil
Crystal Structure of Human BCMA in complex with UniAb(TM) VH
Descriptor: Tumor necrosis factor receptor superfamily member 17, UniAb
Authors:Clarke, S.C, Ma, B, Trinklein, N.D, Schellenberger, U, Osborn, M, Ouisse, L, Boudreau, A, Davison, L, Harris, K.E, Ugamraj, H, Balasubramani, A, Dang, K, Jorgensen, B, Ogana, H, Pham, D, Pratap, P, Sankaran, P, Anegon, I, van Schooten, W, Bruggemann, M, Buelow, R, Force Aldred, S.
Deposit date:2019-01-18
Release date:2019-02-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Multispecific Antibody Development Platform Based on Human Heavy Chain Antibodies
Front Immunol, 9, 2018
7T1J
DownloadVisualize
BU of 7t1j by Molmil
Crystal structure of RUBISCO from Rhodospirillaceae bacterium BRH_c57
Descriptor: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, Ribulose bisphosphate carboxylase
Authors:Pereira, J.H, Liu, A.K, Shih, P.M, Adams, P.D.
Deposit date:2021-12-02
Release date:2022-09-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structural plasticity enables evolution and innovation of RuBisCO assemblies.
Sci Adv, 8, 2022
1T95
DownloadVisualize
BU of 1t95 by Molmil
Crystal Structure of the Shwachman-Bodian-Diamond Syndrome Protein Orthologue from Archaeoglobus fulgidus
Descriptor: Hypothetical protein AF0491
Authors:Shammas, C, Warren, A.J.
Deposit date:2004-05-14
Release date:2004-06-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and mutational analysis of the SBDS protein family. Insight into the leukemia-associated Shwachman-Diamond Syndrome.
J.Biol.Chem., 280, 2005
7SQK
DownloadVisualize
BU of 7sqk by Molmil
Cryo-EM structure of the human augmin complex
Descriptor: HAUS augmin-like complex subunit 1, HAUS augmin-like complex subunit 2, HAUS augmin-like complex subunit 3, ...
Authors:Gabel, C.A, Chang, L.
Deposit date:2021-11-05
Release date:2022-09-21
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (8 Å)
Cite:Molecular architecture of the augmin complex.
Nat Commun, 13, 2022
4S20
DownloadVisualize
BU of 4s20 by Molmil
Structural basis for transcription reactivation by RapA
Descriptor: 5'-D(P*AP*CP*GP*AP*CP*TP*GP*AP*GP*CP*CP*GP*AP*TP*G)-3', 5'-R(P*AP*UP*CP*GP*GP*CP*UP*CP*A)-3', DNA-directed RNA polymerase subunit alpha, ...
Authors:Liu, B, Zuo, Y, Steitz, T.A.
Deposit date:2015-01-16
Release date:2015-02-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (4.7 Å)
Cite:Structural basis for transcription reactivation by RapA.
Proc.Natl.Acad.Sci.USA, 112, 2015
7T2V
DownloadVisualize
BU of 7t2v by Molmil
SARS CoV2 Mpro C145S mutant
Descriptor: 3C-Like Protease
Authors:Mathews, I.I, Hameedi, M.A, Wakatsuki, S.
Deposit date:2021-12-06
Release date:2022-09-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Structural and functional characterization of NEMO cleavage by SARS-CoV-2 3CLpro.
Nat Commun, 13, 2022
7T2U
DownloadVisualize
BU of 7t2u by Molmil
SARS-CoV2 3C-Like protease complexed with Nemo peptide
Descriptor: 3C-Like Protease, NEMO peptide
Authors:Wakatsuki, S, Mathews, I.I, Hameedi, M.A.
Deposit date:2021-12-06
Release date:2022-09-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and functional characterization of NEMO cleavage by SARS-CoV-2 3CLpro.
Nat Commun, 13, 2022
7STO
DownloadVisualize
BU of 7sto by Molmil
Chitin Synthase 2 from Candida albicans bound to polyoxin D
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 1-{(2R,3R,4S,5R)-5-[(S)-{[(2S,3S,4S)-2-amino-5-(carbamoyloxy)-3,4-dihydroxypentanoyl]amino}(carboxy)methyl]-3,4-dihydroxyoxolan-2-yl}-2,4-dioxo-1,2,3,4-tetrahydropyrimidine-5-carboxylic acid (non-preferred name), Chitin synthase
Authors:Ren, Z, Chhetri, A, Lee, S, Yokoyama, K.
Deposit date:2021-11-14
Release date:2022-07-13
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Structural basis for inhibition and regulation of a chitin synthase from Candida albicans.
Nat.Struct.Mol.Biol., 29, 2022
7STM
DownloadVisualize
BU of 7stm by Molmil
Chitin Synthase 2 from Candida albicans bound to UDP-GlcNAc
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, Chitin synthase, MAGNESIUM ION, ...
Authors:Ren, Z, Chhetri, A, Lee, S, Yokoyama, K.
Deposit date:2021-11-14
Release date:2022-07-13
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.02 Å)
Cite:Structural basis for inhibition and regulation of a chitin synthase from Candida albicans.
Nat.Struct.Mol.Biol., 29, 2022
7STN
DownloadVisualize
BU of 7stn by Molmil
Chitin Synthase 2 from Candida albicans bound to Nikkomycin Z
Descriptor: (2S)-{[(2S,3S,4S)-2-amino-4-hydroxy-4-(5-hydroxypyridin-2-yl)-3-methylbutanoyl]amino}[(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxyoxolan-2-yl]acetic acid (non-preferred name), 1,2-Distearoyl-sn-glycerophosphoethanolamine, Chitin synthase
Authors:Ren, Z, Chhetri, A, Lee, S, Yokoyama, K.
Deposit date:2021-11-14
Release date:2022-07-13
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.19 Å)
Cite:Structural basis for inhibition and regulation of a chitin synthase from Candida albicans.
Nat.Struct.Mol.Biol., 29, 2022
2I26
DownloadVisualize
BU of 2i26 by Molmil
Crystal structure analysis of the nurse shark new antigen receptor ancestral variable domain in complex with lysozyme
Descriptor: Lysozyme C, New Antigen Receptor Ancestral, SULFATE ION
Authors:Stanfield, R.L, Wilson, I.A.
Deposit date:2006-08-15
Release date:2007-03-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Maturation of Shark Single-domain (IgNAR) Antibodies: Evidence for Induced-fit Binding.
J.Mol.Biol., 367, 2007
4QQG
DownloadVisualize
BU of 4qqg by Molmil
Crystal structure of an N-terminal HTATIP fragment
Descriptor: Histone acetyltransferase KAT5, UNKNOWN ATOM OR ION
Authors:Liu, Y, Tempel, W, Wernimont, A.K, Dobrovetsky, E, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2014-06-27
Release date:2014-07-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and histone binding studies of the chromo barrel domain of TIP60.
FEBS Lett., 592, 2018
3E4U
DownloadVisualize
BU of 3e4u by Molmil
Crystal Structure of the Wild-Type Human BCL6 BTB/POZ Domain
Descriptor: B-cell lymphoma 6 protein
Authors:Stead, M.A, Rosbrook, G.O, Hadden, J.M, Trinh, C.H, Carr, S.B, Wright, S.C.
Deposit date:2008-08-12
Release date:2008-12-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of the wild-type human BCL6 POZ domain.
Acta Crystallogr.,Sect.F, 64, 2008
6VRA
DownloadVisualize
BU of 6vra by Molmil
Anthrax octamer prechannel bound to full-length edema factor
Descriptor: CALCIUM ION, Calmodulin-sensitive adenylate cyclase, Protective antigen
Authors:Zhou, K, Hardenbrook, N.J, Liu, S, Cui, Y.X, Krantz, B.A, Zhou, Z.H.
Deposit date:2020-02-07
Release date:2020-12-16
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Atomic Structures of Anthrax Prechannel Bound with Full-Length Lethal and Edema Factors.
Structure, 28, 2020
1TKN
DownloadVisualize
BU of 1tkn by Molmil
Solution structure of CAPPD*, an independently folded extracellular domain of human Amyloid-beta Precursor Protein
Descriptor: Amyloid beta A4 protein
Authors:Dulubova, I, Ho, A, Huryeva, I, Sudhof, T.C, Rizo, J.
Deposit date:2004-06-08
Release date:2004-08-03
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Three-dimensional structure of an independently folded extracellular domain of human amyloid-beta precursor protein.
Biochemistry, 43, 2004
5K5G
DownloadVisualize
BU of 5k5g by Molmil
Structure of human islet amyloid polypeptide in complex with an engineered binding protein
Descriptor: HI18, Islet amyloid polypeptide
Authors:Mirecka, E.A, Feuerstein, S, Gremer, L, Schroeder, G.F, Stoldt, M, Willbold, D, Hoyer, W.
Deposit date:2016-05-23
Release date:2016-10-26
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:beta-Hairpin of Islet Amyloid Polypeptide Bound to an Aggregation Inhibitor.
Sci Rep, 6, 2016
1JY9
DownloadVisualize
BU of 1jy9 by Molmil
MINIMIZED AVERAGE STRUCTURE OF DP-TT2
Descriptor: DP-TT2
Authors:Stanger, H.E, Syud, F.A, Espinosa, J.F, Giriat, I, Muir, T, Gellman, S.H.
Deposit date:2001-09-11
Release date:2001-09-19
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Length-dependent stability and strand length limits in antiparallel beta -sheet secondary structure.
Proc.Natl.Acad.Sci.USA, 98, 2001
4RA7
DownloadVisualize
BU of 4ra7 by Molmil
Structure of a putative peptidoglycan glycosyltransferase from Atopobium parvulum in complex with nafcillin
Descriptor: (2R,4S)-2-[(1R)-2-hydroxy-1-{[(2-hydroxynaphthalen-1-yl)carbonyl]amino}ethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, Peptidoglycan glycosyltransferase
Authors:Filippova, E.V, Minasov, G, Kiryukhina, O, Clancy, S, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-09-09
Release date:2014-09-24
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structure of a putative peptidoglycan glycosyltransferase from Atopobium parvulum in complex with nafcillin
To be Published
1SW2
DownloadVisualize
BU of 1sw2 by Molmil
Crystal structure of ProX from Archeoglobus fulgidus in complex with glycine betaine
Descriptor: TRIMETHYL GLYCINE, osmoprotection protein (proX)
Authors:Schiefner, A, Holtmann, G, Diederichs, K, Welte, W, Bremer, E.
Deposit date:2004-03-30
Release date:2004-09-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for the binding of compatible solutes by ProX from the hyperthermophilic archaeon Archaeoglobus fulgidus.
J.Biol.Chem., 279, 2004
4IDT
DownloadVisualize
BU of 4idt by Molmil
Crystal Structure of NIK with 11-bromo-5,6,7,8-tetrahydropyrimido[4',5':3,4]cyclohepta[1,2-b]indol-2-amine (T28)
Descriptor: 11-bromo-5,6,7,8-tetrahydropyrimido[4',5':3,4]cyclohepta[1,2-b]indol-2-amine, Mitogen-activated protein kinase kinase kinase 14
Authors:Liu, J, Sudom, A, Wang, Z.
Deposit date:2012-12-13
Release date:2013-04-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Inhibiting NF-KB-inducing kinase (NIK): Discovery, structure-based design, synthesis, structure activity relationship, and co-crystal structures
Bioorg.Med.Chem.Lett., 23, 2013

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon