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PDB: 88608 results

2I7G
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Crystal Structure of Monooxygenase from Agrobacterium tumefaciens
Descriptor: DI(HYDROXYETHYL)ETHER, Monooxygenase, SULFATE ION
Authors:Kim, Y, Xu, X, Zheng, H, Joachimiak, A, Edwards, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-08-30
Release date:2006-10-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:The Crystal Structure of Monooxygenase from Agrobacterium tumefaciens
To be Published, 2006
7T4L
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BU of 7t4l by Molmil
Structure of dimeric phosphorylated Pediculus humanus (Ph) PINK1 with extended alpha-C helix in chain B
Descriptor: Serine/threonine-protein kinase PINK1, putative
Authors:Gan, Z.Y, Leis, A, Dewson, G, Glukhova, A, Komander, D.
Deposit date:2021-12-10
Release date:2022-01-12
Last modified:2022-02-23
Method:ELECTRON MICROSCOPY (3.28 Å)
Cite:Activation mechanism of PINK1.
Nature, 602, 2022
6CKY
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BU of 6cky by Molmil
Crystal structure of UcmS2
Descriptor: Glyoxalase
Authors:Chang, C.Y, Chang, C, Annaval, T, Babnigg, G, Phillips Jr, G.N, Joachimiak, A, Shen, B.
Deposit date:2018-03-01
Release date:2019-03-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of UcmS2
To Be Published
1T0S
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BU of 1t0s by Molmil
Structure of the Toluene/o-Xylene Monooxygenase Hydroxylase with 4-bromophenol bound
Descriptor: 4-BROMOPHENOL, FE (III) ION, HYDROXIDE ION, ...
Authors:Sazinsky, M.H, Bard, J, Di Donato, A, Lippard, S.J.
Deposit date:2004-04-12
Release date:2004-07-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of the Toluene/o-Xylene Monooxygenase Hydroxylase from Pseudomonas stutzeri OX1: INSIGHT INTO THE SUBSTRATE SPECIFICITY, SUBSTRATE CHANNELING, AND ACTIVE SITE TUNING OF MULTICOMPONENT MONOOXYGENASES.
J.Biol.Chem., 279, 2004
6VP7
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BU of 6vp7 by Molmil
Cryo-EM structure of the C-terminal half of the Parkinson's Disease-linked protein Leucine Rich Repeat Kinase 2 (LRRK2)
Descriptor: Leucine-rich repeat serine/threonine-protein kinase 2
Authors:Leschziner, A, Deniston, C, Lahiri, I.
Deposit date:2020-02-01
Release date:2020-08-26
Last modified:2020-12-23
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure of LRRK2 in Parkinson's disease and model for microtubule interaction.
Nature, 588, 2020
3ZOT
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BU of 3zot by Molmil
Structure of E.coli rhomboid protease GlpG in complex with monobactam L29 (data set 2)
Descriptor: CHLORIDE ION, RHOMBOID PROTEASE GLPG, nonyl beta-D-glucopyranoside, ...
Authors:Vinothkumar, K.R, Pierrat, O.A, Large, J.M, Freeman, M.
Deposit date:2013-02-24
Release date:2013-05-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.399 Å)
Cite:Structure of Rhomboid Protease in Complex with Beta-Lactam Inhibitors Defines the S2' Cavity.
Structure, 21, 2013
2I0F
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BU of 2i0f by Molmil
Lumazine synthase RibH1 from Brucella abortus (Gene BruAb1_0785, Swiss-Prot entry Q57DY1)
Descriptor: 6,7-dimethyl-8-ribityllumazine synthase 1, CALCIUM ION
Authors:Klinke, S, Zylberman, V, Bonomi, H.R, Haase, I, Guimaraes, B.G, Braden, B.C, Bacher, A, Fischer, M, Goldbaum, F.A.
Deposit date:2006-08-10
Release date:2007-08-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structural and Kinetic Properties of Lumazine Synthase Isoenzymes in the Order Rhizobiales
J.Mol.Biol., 373, 2007
2I0Z
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Crystal structure of a FAD binding protein from Bacillus cereus, a putative NAD(FAD)-utilizing dehydrogenases
Descriptor: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, NAD(FAD)-utilizing dehydrogenases
Authors:Minasov, G, Shuvalova, L, Vorontsov, I.I, Kiryukhina, O, Abdullah, J, Collart, F.R, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-08-11
Release date:2006-08-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Crystal structure of a FAD binding protein from Bacillus cereus, a putative NAD(FAD)-utilizing dehydrogenases
To be Published
1T4D
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BU of 1t4d by Molmil
Crystal structure of Escherichia coli aspartate beta-semialdehyde dehydrogenase (EcASADH), at 1.95 Angstrom resolution
Descriptor: Aspartate-semialdehyde dehydrogenase
Authors:Nichols, C.E, Dhaliwal, B, Lockyer, M, Hawkins, A.R, Stammers, D.K.
Deposit date:2004-04-29
Release date:2004-08-17
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:High-resolution Structures Reveal Details of Domain Closure and "Half-of-sites-reactivity" in Escherichia coli Aspartate beta-Semialdehyde Dehydrogenase.
J.Mol.Biol., 341, 2004
6W0A
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BU of 6w0a by Molmil
Open-gate KcsA soaked in 1 mM BaCl2
Descriptor: BARIUM ION, Fab Heavy Chain, Fab Light Chain, ...
Authors:Rohaim, A, Gong, L, Li, J.
Deposit date:2020-02-29
Release date:2020-07-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.237 Å)
Cite:Open and Closed Structures of a Barium-Blocked Potassium Channel.
J.Mol.Biol., 432, 2020
5JZY
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Thrombin in complex with (S)-1-((R)-2-amino-3-cyclohexylpropanoyl)-N-(4-carbamimidoylbenzyl)pyrrolidine-2-carboxamide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-cyclohexyl-D-alanyl-N-[(4-carbamimidoylphenyl)methyl]-L-prolinamide, DIMETHYL SULFOXIDE, ...
Authors:Sandner, A, Heine, A, Klebe, G.
Deposit date:2016-05-17
Release date:2017-06-07
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Strategies for Late-Stage Optimization: Profiling Thermodynamics by Preorganization and Salt Bridge Shielding.
J.Med.Chem., 62, 2019
6W0I
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Closed-gate KcsA soaked in 10mM KCl/5mM BaCl2
Descriptor: Fab Heavy Chain, Fab Light Chain, POTASSIUM ION, ...
Authors:Rohaim, A, Gong, L, Li, J.
Deposit date:2020-02-29
Release date:2020-07-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.328 Å)
Cite:Open and Closed Structures of a Barium-Blocked Potassium Channel.
J.Mol.Biol., 432, 2020
6W43
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BU of 6w43 by Molmil
APE1 AP-endonuclease product complex R237C
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Freudenthal, B.D, Whitaker, A.M.
Deposit date:2020-03-10
Release date:2020-06-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Molecular and structural characterization of disease-associated APE1 polymorphisms.
DNA Repair (Amst.), 91-92, 2020
6W0Q
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BU of 6w0q by Molmil
APE1 endonuclease product complex D148E
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3'), ...
Authors:Freudenthal, B.D, Whitaker, A.M.
Deposit date:2020-03-02
Release date:2020-06-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Molecular and structural characterization of disease-associated APE1 polymorphisms.
DNA Repair (Amst.), 91-92, 2020
4R85
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BU of 4r85 by Molmil
Crystal structure of 5-methylcytosine deaminase from Klebsiella pneumoniae liganded with 5-methylcytosine
Descriptor: 5-methylcytosine, Cytosine deaminase, FE (II) ION, ...
Authors:Fedorov, A.A, Fedorov, E.V, Hitchcock, D.S, Raushel, F.M, Almo, S.C.
Deposit date:2014-08-29
Release date:2014-09-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.802 Å)
Cite:Crystal structure of 5-methylcytosine deaminase from Klebsiella pneumoniae liganded with 5-methylcytosine
To be Published
3ECR
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BU of 3ecr by Molmil
Structure of human porphobilinogen deaminase
Descriptor: 3-[5-{[3-(2-carboxyethyl)-4-(carboxymethyl)-5-methyl-1H-pyrrol-2-yl]methyl}-4-(carboxymethyl)-1H-pyrrol-3-yl]propanoic acid, Porphobilinogen deaminase
Authors:Song, G, Li, Y, Cheng, C, Zhao, Y, Gao, A, Zhang, R, Joachimiak, A, Shaw, N, Liu, Z.J.
Deposit date:2008-09-01
Release date:2008-09-30
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.182 Å)
Cite:Structural insight into acute intermittent porphyria.
Faseb J., 23, 2009
3EDI
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BU of 3edi by Molmil
Crystal structure of tolloid-like protease 1 (TLL-1) protease domain
Descriptor: ACETYL GROUP, DIMETHYL SULFOXIDE, SULFATE ION, ...
Authors:Mac Sweeney, A.
Deposit date:2008-09-03
Release date:2008-09-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural basis for the substrate specificity of bone morphogenetic protein 1/tolloid-like metalloproteases
To be Published
2VWJ
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BU of 2vwj by Molmil
Uracil Recognition in Archaeal DNA Polymerases Captured by X-ray Crystallography.
Descriptor: 5'-D(*AP*AP*UP*GP*GP*AP*GP*AP*CP*GP *GP*CP*TP*TP*TP*TP*GP*CP*CP*GP*TP*GP*TP*C)-3', DNA POLYMERASE, POTASSIUM ION
Authors:Firbank, S.J, Wardle, J, Heslop, P, Lewis, R.J, Connolly, B.A.
Deposit date:2008-06-25
Release date:2008-07-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Uracil Recognition in Archaeal DNA Polymerases Captured by X-Ray Crystallography.
J.Mol.Biol., 381, 2008
3X2H
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BU of 3x2h by Molmil
X-ray structure of PcCel45A N92D with cellopentaose at 95K.
Descriptor: 3-methylpentane-1,5-diol, Endoglucanase V-like protein, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
Authors:Nakamura, A, Ishida, T, Samejima, M, Igarashi, K.
Deposit date:2014-12-22
Release date:2015-10-07
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (0.99 Å)
Cite:"Newton's cradle" proton relay with amide-imidic acid tautomerization in inverting cellulase visualized by neutron crystallography.
Sci Adv, 1, 2015
2I8A
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BU of 2i8a by Molmil
Salmonella typhimurium liganded by phosphate ion at 1.64A resolution
Descriptor: PHOSPHATE ION, Uridine phosphorylase
Authors:Timofeev, V.I, Gabdoulkhakov, A.G, Mikhailov, A.M.
Deposit date:2006-09-01
Release date:2007-09-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Salmonella typhimurium liganded by phosphate ion at 1.64A resolution
To be Published
7TDM
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BU of 7tdm by Molmil
CryoEM Structure of sFab COP-2 Complex with human claudin-4 and Clostridium perfringens enterotoxin C-terminal domain
Descriptor: COP-2 Fab Heavy chain, COP-2 Fab Light chain, Claudin-4, ...
Authors:Vecchio, A.J.
Deposit date:2022-01-01
Release date:2022-02-09
Last modified:2024-01-17
Method:ELECTRON MICROSCOPY (6.9 Å)
Cite:Development, structure, and mechanism of synthetic antibodies that target claudin and Clostridium perfringens enterotoxin complexes.
J.Biol.Chem., 298, 2022
1TAF
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BU of 1taf by Molmil
DROSOPHILA TBP ASSOCIATED FACTORS DTAFII42/DTAFII62 HETEROTETRAMER
Descriptor: TFIID TBP ASSOCIATED FACTOR 42, TFIID TBP ASSOCIATED FACTOR 62, ZINC ION
Authors:Xie, X, Kokubo, T, Cohen, S.L, Mirza, U.A, Hoffmann, A, Chait, B.T, Roeder, R.G, Nakatani, Y, Burley, S.K.
Deposit date:1996-06-01
Release date:1996-12-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural similarity between TAFs and the heterotetrameric core of the histone octamer.
Nature, 380, 1996
4QQE
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BU of 4qqe by Molmil
Crystal structure of WDR5, WD repeat domain 5 in complex with compound SGC-DS-MT-0345
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, N-[2-(4-methylpiperazin-1-yl)-5-(quinolin-3-yl)phenyl]-6-oxo-4-(trifluoromethyl)-1,6-dihydropyridine-3-carboxamide, ...
Authors:Dong, A, Dombrovski, L, Wernimont, A, Smil, D, Getlik, M, Senisterra, G, Poda, G, Al-Awar, R, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Schapira, M, Vedadi, M, Wu, H, Structural Genomics Consortium (SGC)
Deposit date:2014-06-27
Release date:2014-07-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of WDR5, WD repeat domain 5 in complex with compound SGC-DS-MT-0345
To be Published
7TDN
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BU of 7tdn by Molmil
CryoEM Structure of sFab COP-3 Complex with human claudin-4 and Clostridium perfringens enterotoxin C-terminal domain
Descriptor: COP-3 Fab Heavy chain, COP-3 Fab Light chain, Claudin-4, ...
Authors:Vecchio, A.J.
Deposit date:2022-01-01
Release date:2022-02-09
Last modified:2024-01-17
Method:ELECTRON MICROSCOPY (5 Å)
Cite:Development, structure, and mechanism of synthetic antibodies that target claudin and Clostridium perfringens enterotoxin complexes.
J.Biol.Chem., 298, 2022
5K7W
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BU of 5k7w by Molmil
Crystal structure of the catalytic domain of Mettl3/Mettl14 complex with SAH
Descriptor: N6-adenosine-methyltransferase 70 kDa subunit, N6-adenosine-methyltransferase subunit METTL14, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Wang, P, Doxtader, K.A, Nam, Y.
Deposit date:2016-05-26
Release date:2016-07-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural Basis for Cooperative Function of Mettl3 and Mettl14 Methyltransferases.
Mol.Cell, 63, 2016

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