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PDB: 89169 results

4Z9F
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BU of 4z9f by Molmil
Halohydrin hydrogen-halide-lyase, HheA
Descriptor: CHLORIDE ION, Halohydrin epoxidase A
Authors:Watanabe, F, Yu, F, Ohtaki, A, Yamanaka, Y, Noguchi, K, Yohda, M, Odaka, M.
Deposit date:2015-04-10
Release date:2015-11-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structures of halohydrin hydrogen-halide-lyases from Corynebacterium sp. N-1074
Proteins, 83, 2015
6TTX
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BU of 6ttx by Molmil
Crystal structure of the human METTL3-METTL14 complex bound to Compound 5 (ASI_M3M_051)
Descriptor: (2~{S},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)-~{N}-(piperidin-4-ylmethyl)oxolane-2-carboxamide, ACETATE ION, N6-adenosine-methyltransferase catalytic subunit, ...
Authors:Bedi, R.K, Huang, D, Sledz, P, Caflisch, A.
Deposit date:2019-12-30
Release date:2020-03-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Small-Molecule Inhibitors of METTL3, the Major Human Epitranscriptomic Writer.
Chemmedchem, 15, 2020
5VM5
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BU of 5vm5 by Molmil
Engineered tryptophan synthase b-subunit from Pyrococcus furiosus, PfTrpB2B9, with Ser bound
Descriptor: 2-{[(E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}prop-2-enoic acid, SODIUM ION, Tryptophan synthase beta chain 1, ...
Authors:Buller, A.R, van Roye, P.
Deposit date:2017-04-26
Release date:2017-05-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Directed Evolution Mimics Allosteric Activation by Stepwise Tuning of the Conformational Ensemble.
J. Am. Chem. Soc., 140, 2018
5VN5
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BU of 5vn5 by Molmil
Crystal structure of LigY from Sphingobium sp. strain SYK-6
Descriptor: 2,2',3-trihydroxy-3'-methoxy-5,5'-dicarboxybiphenyl meta-cleavage compound hydrolase, CHLORIDE ION, ZINC ION
Authors:Kuatsjah, E, Chan, A.C.K, Kobylarz, M.J, Murphy, M.E.P, Eltis, L.D.
Deposit date:2017-04-28
Release date:2017-09-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The bacterialmeta-cleavage hydrolase LigY belongs to the amidohydrolase superfamily, not to the alpha / beta-hydrolase superfamily.
J. Biol. Chem., 292, 2017
6TPQ
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RNase M5 bound to 50S ribosome with precursor 5S rRNA
Descriptor: 50S ribosomal protein L10, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
Authors:Oerum, S, Dendooven, T, Gilet, L, Catala, M, Degut, C, Trinquier, A, Barraud, P, Luisi, B, Condon, C, Tisne, C.
Deposit date:2019-12-13
Release date:2020-09-30
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.07 Å)
Cite:Structures of B. subtilis Maturation RNases Captured on 50S Ribosome with Pre-rRNAs.
Mol.Cell, 80, 2020
7FCN
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BU of 7fcn by Molmil
Crystal strcture of PirA insecticidal protein from Photorhabdus akhurstii
Descriptor: 1,2-ETHANEDIOL, 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, DI(HYDROXYETHYL)ETHER, ...
Authors:Prashar, A, Kumar, A, Kinkar, O, Hire, R.S, Makde, R.D.
Deposit date:2021-07-15
Release date:2022-07-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of PirA and PirB toxins from Photorhabdus akhurstii subsp. akhurstii K-1
Insect Biochem.Mol.Biol., 162, 2023
6TR3
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BU of 6tr3 by Molmil
Ruminococcus gnavus GH29 fucosidase E1_10125 in complex with fucose
Descriptor: CALCIUM ION, F5/8 type C domain-containing protein, MAGNESIUM ION, ...
Authors:Owen, C.D, Wu, H, Crost, E, Colvile, A, Juge, N, Walsh, M.A.
Deposit date:2019-12-17
Release date:2020-10-28
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Fucosidases from the human gut symbiont Ruminococcus gnavus.
Cell.Mol.Life Sci., 78, 2021
6TSG
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BU of 6tsg by Molmil
Crystal structure of Peroxisome proliferator-activated receptor gamma (PPARG) in complex with TETRAC
Descriptor: 3,3',5,5'-TETRAIODOTHYROACETIC ACID, Peroxisome proliferator-activated receptor gamma
Authors:Chaikuad, A, Gellrich, L, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Merk, D, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2019-12-20
Release date:2020-07-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:l-Thyroxin and the Nonclassical Thyroid Hormone TETRAC Are Potent Activators of PPAR gamma.
J.Med.Chem., 63, 2020
8H4P
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BU of 8h4p by Molmil
class I sesquiterpene synthase
Descriptor: Longiborneol synthase CLM1, MAGNESIUM ION, N-benzyl-N,N-diethylethanaminium, ...
Authors:Li, A.N, Lou, T.T, Ma, M.
Deposit date:2022-10-11
Release date:2023-08-23
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Structural Insights into Three Sesquiterpene Synthases for the Biosynthesis of Tricyclic Sesquiterpenes and Chemical Space Expansion by Structure-Based Mutagenesis.
J.Am.Chem.Soc., 2023
5VW8
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BU of 5vw8 by Molmil
NADP+ soak of Y316S mutant of corn root ferredoxin:NADP+ reductase in alternate space group
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin--NADP reductase, MAGNESIUM ION, ...
Authors:Kean, K.M, Carpenter, R.A, Hall, A.R, Karplus, P.A.
Deposit date:2017-05-21
Release date:2017-08-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.808 Å)
Cite:High-resolution studies of hydride transfer in the ferredoxin:NADP(+) reductase superfamily.
FEBS J., 284, 2017
6TTM
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BU of 6ttm by Molmil
Hyoscyamine 6-hydroxylase in complex with N-oxalylglycine and hyoscyamine
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Hyoscyamine 6 beta-hydroxylase, ...
Authors:Kluza, A, Kurpiewska, K, Mrugala, B, Porebski, P.J, Niedzialkowska, E, Minor, W, Borowski, T.
Deposit date:2019-12-29
Release date:2020-03-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Regioselectivity of hyoscyamine 6 beta-hydroxylase-catalysed hydroxylation as revealed by high-resolution structural information and QM/MM calculations.
Dalton Trans, 49, 2020
6TTP
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BU of 6ttp by Molmil
Crystal structure of the human METTL3-METTL14 complex bound to Compound 1/Adenosine (DHU_M3M_023)
Descriptor: ACETATE ION, ADENOSINE, N6-adenosine-methyltransferase catalytic subunit, ...
Authors:Bedi, R.K, Huang, D, Sledz, P, Caflisch, A.
Deposit date:2019-12-30
Release date:2020-03-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Small-Molecule Inhibitors of METTL3, the Major Human Epitranscriptomic Writer.
Chemmedchem, 15, 2020
5EA2
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BU of 5ea2 by Molmil
Crystal Structure of Holo NAD(P)H dehydrogenase, quinone 1
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NAD(P)H dehydrogenase [quinone] 1
Authors:Pidugu, L.S, Mbimba, J.E, Ahmad, M, Pozharski, E, Sausville, E.A, Emadi, A, Toth, E.A.
Deposit date:2015-10-15
Release date:2016-02-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:A direct interaction between NQO1 and a chemotherapeutic dimeric naphthoquinone.
Bmc Struct.Biol., 16, 2016
6QQ8
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BU of 6qq8 by Molmil
Cryogenic temperature structure of the fluorescent protein Cerulean recorded after an accumulated dose of 290 kGy
Descriptor: Green fluorescent protein
Authors:Gotthard, G, Aumonier, S, Royant, A.
Deposit date:2019-02-18
Release date:2019-06-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Specific radiation damage is a lesser concern at room temperature.
Iucrj, 6, 2019
6QSE
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BU of 6qse by Molmil
Crystal structure of Pizza6S in the presence of Anderson-Evans (TEW)
Descriptor: 6-tungstotellurate(VI), Pizza6S
Authors:Noguchi, H, Vandebroek, L, Kamata, K, Tame, J.R.H, Van Meervelt, L, Parac-Vogt, T.N, Voet, A.R.D.
Deposit date:2019-02-20
Release date:2020-03-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Hybrid assemblies of a symmetric designer protein and polyoxometalates with matching symmetry.
Chem.Commun.(Camb.), 56, 2020
5DPR
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BU of 5dpr by Molmil
Crystal structure of PLEKHM1 LIR-fused human LC3A_2-121
Descriptor: Pleckstrin homology domain-containing family M member 1,Microtubule-associated proteins 1A/1B light chain 3A
Authors:Ravichandran, A.C, Suzuki, H, Dobson, R.C.J.
Deposit date:2015-09-14
Release date:2016-09-28
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and functional analysis of the GABARAP interaction motif (GIM).
EMBO Rep., 18, 2017
4ZJO
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BU of 4zjo by Molmil
Crystal structure of AcrB triple mutant in complex with antibiotic in P21 space group
Descriptor: DODECYL-BETA-D-MALTOSIDE, ERYTHROMYCIN A, Multidrug efflux pump subunit AcrB, ...
Authors:Ababou, A, Koronakis, V.
Deposit date:2015-04-29
Release date:2016-07-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structures of Gate Loop Variants of the AcrB Drug Efflux Pump Bound by Erythromycin Substrate.
Plos One, 11, 2016
6DO1
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BU of 6do1 by Molmil
Structure of nanobody-stabilized angiotensin II type 1 receptor bound to S1I8
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-like peptide S1I8, ...
Authors:Wingler, L.M, McMahon, C, Staus, D.P, Lefkowitz, R.J, Kruse, A.C.
Deposit date:2018-06-08
Release date:2019-01-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.901 Å)
Cite:Distinctive Activation Mechanism for Angiotensin Receptor Revealed by a Synthetic Nanobody.
Cell, 176, 2019
4R3J
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BU of 4r3j by Molmil
Structure of a putative peptidoglycan glycosyltransferase from Atopobium parvulum in complex with cefapirin
Descriptor: (2R)-2-[(1R)-1-(acetylamino)-2-oxoethyl]-5-methyl-3,6-dihydro-2H-1,3-thiazine-4-carboxylic acid, GLYCEROL, PHOSPHATE ION, ...
Authors:Filippova, E.V, Minasov, G, Kiryukhina, O, Clancy, S, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-08-15
Release date:2014-09-17
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Structure of a putative peptidoglycan glycosyltransferase from Atopobium parvulum in complex with cefapirin
To be Published
4ZO6
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BU of 4zo6 by Molmil
Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with cellobiose
Descriptor: GLYCEROL, Lin1840 protein, MAGNESIUM ION, ...
Authors:Nakajima, M, Yoshida, R, Miyanaga, A, Abe, K, Takahashi, Y, Sugimoto, N, Toyoizumi, H, Nakai, H, Kitaoka, M, Taguchi, H.
Deposit date:2015-05-06
Release date:2016-05-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Functional and Structural Analysis of a beta-Glucosidase Involved in beta-1,2-Glucan Metabolism in Listeria innocua
Plos One, 11, 2016
6TZ3
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BU of 6tz3 by Molmil
Crystal Structure of Human Synaptotagmin 1 C2B without Ca2+
Descriptor: SULFATE ION, Synaptotagmin-1
Authors:Dominguez, M.J, Karmakar, S, Meyer, A.G, Sutton, R.B.
Deposit date:2019-08-09
Release date:2020-05-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Molecular Basis for Synaptotagmin-1-Associated Neurodevelopmental Disorder.
Neuron, 107, 2020
5DU6
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BU of 5du6 by Molmil
Crystal structure of M. tuberculosis EchA6 bound to ligand GSK059A.
Descriptor: (5R,7R)-5-(4-ethylphenyl)-N-(4-fluorobenzyl)-7-methyl-4,5,6,7-tetrahydropyrazolo[1,5-a]pyrimidine-3-carboxamide, Probable enoyl-CoA hydratase echA6
Authors:Cox, J.A.G, Besra, G.S, Futterer, K.
Deposit date:2015-09-18
Release date:2016-01-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:THPP target assignment reveals EchA6 as an essential fatty acid shuttle in mycobacteria.
Nat Microbiol, 1, 2016
5DUI
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BU of 5dui by Molmil
Identification of a new FoxO1 binding site that precludes CREB binding at the glucose-6-phosphatase catalytic subunit gene promoter
Descriptor: DNA (5'-D(*AP*TP*GP*AP*TP*TP*TP*AP*CP*GP*TP*AP*AP*AP*AP*TP*AP*GP*AP*AP*A)-3'), DNA (5'-D(*TP*TP*TP*TP*CP*TP*AP*TP*TP*TP*TP*AP*CP*GP*TP*AP*AP*AP*TP*CP*A)-3'), Forkhead box protein O1
Authors:Singh, P, Endrizzi, J.A, Chi, Y.-I.
Deposit date:2015-09-18
Release date:2016-09-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.306 Å)
Cite:Crystal structures reveal a new and novel FoxO1 binding site within the human glucose-6-phosphatase catalytic subunit 1 gene promoter.
J. Struct. Biol., 198, 2017
6QQF
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BU of 6qqf by Molmil
Room temperature structure of Hen Egg White Lysozyme recorded after an accumulated dose of 100 kGy
Descriptor: CHLORIDE ION, Lysozyme C
Authors:Gotthard, G, Aumonier, S, Royant, A.
Deposit date:2019-02-18
Release date:2019-06-19
Last modified:2019-07-31
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Specific radiation damage is a lesser concern at room temperature.
Iucrj, 6, 2019
8A8J
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BU of 8a8j by Molmil
Complex of RecF and DNA from Thermus thermophilus.
Descriptor: DNA replication and repair protein RecF, MAGNESIUM ION, Oligo1, ...
Authors:Nirwal, S, Czarnocki-Cieciura, M, Chaudhary, A, Zajko, W, Skowronek, K, Chamera, S, Figiel, M, Nowotny, M.
Deposit date:2022-06-23
Release date:2023-04-26
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Mechanism of RecF-RecO-RecR cooperation in bacterial homologous recombination.
Nat.Struct.Mol.Biol., 30, 2023

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数据于2024-09-18公开中

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