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PDB: 88675 件

8OKH
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Crystal structure of Bdellovibrio bacteriovorus Bd1399
分子名称: 1,2-ETHANEDIOL, DUF2807 domain-containing protein, GLYCEROL
著者Caulton, S.G, Lovering, A.L.
登録日2023-03-28
公開日2023-10-25
最終更新日2024-06-26
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Protein target highlights in CASP15: Analysis of models by structure providers.
Proteins, 91, 2023
6XU3
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(R)-selective amine transaminase from Shinella sp.
分子名称: 3-AMINOBENZOIC ACID, CHLORIDE ION, Class IV aminotransferase, ...
著者Telzerow, A, Hakansson, M, Steiner, K.
登録日2020-01-17
公開日2020-12-09
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Expanding the Toolbox of R-Selective Amine Transaminases by Identification and Characterization of New Members.
Chembiochem, 22, 2021
8CH0
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Crystal structure of an 8-repeat consensus TPR superhelix with Gadolinium.
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Consensus tetratricopeptide repeat protein, ...
著者Liutkus, M, Rojas, A.L, Cortajarena, A.L.
登録日2023-02-06
公開日2024-02-21
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Diverse crystalline protein scaffolds through metal-dependent polymorphism.
Protein Sci., 33, 2024
7PLY
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Cryo-EM structure of the actomyosin-V complex in the rigor state (central 1er, young JASP-stabilized F-actin)
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
著者Pospich, S, Sweeney, H.L, Houdusse, A, Raunser, S.
登録日2021-09-01
公開日2021-12-22
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献High-resolution structures of the actomyosin-V complex in three nucleotide states provide insights into the force generation mechanism.
Elife, 10, 2021
5J6S
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Crystal structure of Endoplasmic Reticulum Aminopeptidase 2 (ERAP2) in complex with a hydroxamic derivative ligand
分子名称: (2S)-N~1~-benzyl-2-[(4-fluorophenyl)methyl]-N~3~-hydroxypropanediamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Saridakis, E, Giastas, P, Mpakali, A, Deprez-Poulain, R, Stratikos, E.
登録日2016-04-05
公開日2017-03-15
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal Structures of ERAP2 Complexed with Inhibitors Reveal Pharmacophore Requirements for Optimizing Inhibitor Potency.
ACS Med Chem Lett, 8, 2017
6O6I
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Endoplasmic reticulum protein 29 (ERp29) C-terminal domain: Structure Determination from Backbone Amide Pseudocontact Shifts Generated by Double-histidine Cobalt Tags
分子名称: Endoplasmic reticulum resident protein 29
著者Bahramzadeh, A, Huber, T, Otting, G.
登録日2019-03-06
公開日2019-07-24
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Three-Dimensional Protein Structure Determination Using Pseudocontact Shifts of Backbone Amide Protons Generated by Double-Histidine Co2+-Binding Motifs at Multiple Sites.
Biochemistry, 58, 2019
5LI6
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BU of 5li6 by Molmil
Crystal structure of Mycobacterium tuberculosis CYP126A1 in complex with N-isopropyl-N-((3-(4-methoxyphenyl)-1,2,4-oxadiazol-5-yl)methyl)-2-(4-nitrophenyl)acetamide
分子名称: PROTOPORPHYRIN IX CONTAINING FE, Putative cytochrome P450 126, ~{N}-[[3-(4-methoxyphenyl)-1,2,4-oxadiazol-5-yl]methyl]-2-(4-nitrophenyl)-~{N}-propan-2-yl-ethanamide
著者Levy, C, Munro, A.W, Leys, D.
登録日2016-07-14
公開日2016-12-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural Characterization and Ligand/Inhibitor Identification Provide Functional Insights into the Mycobacterium tuberculosis Cytochrome P450 CYP126A1.
J. Biol. Chem., 292, 2017
6XVO
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Crystal structure of the intertwined dimer of the c-Src SH3 domain without ATCUN motif
分子名称: DI(HYDROXYETHYL)ETHER, Proto-oncogene tyrosine-protein kinase Src, TRIETHYLENE GLYCOL
著者Camara-Artigas, A, Plaza-Garrido, M.
登録日2020-01-22
公開日2020-04-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The effect of an engineered ATCUN motif on the structure and biophysical properties of the SH3 domain of c-Src tyrosine kinase.
J.Biol.Inorg.Chem., 25, 2020
7S8K
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Crystal structure of a GH12-2 family cellulase from Thermococcus sp. 2319x1
分子名称: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, CALCIUM ION, CHLORIDE ION, ...
著者Stogios, P.J, Skarina, T, Khusnutdinova, A, Yakunin, A.F, Savchenko, A.
登録日2021-09-18
公開日2022-08-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献GH12-2 family cellulase
To Be Published
6F5R
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Crystal Structure of KDM4D with GF028 ligand
分子名称: 1,2-ETHANEDIOL, 2-(3-oxidanylpropylamino)pyridine-4-carboxylic acid, CHLORIDE ION, ...
著者Malecki, P.H, Link, A, Weiss, M.S, Heinemann, U.
登録日2017-12-02
公開日2018-12-12
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.607 Å)
主引用文献Crystal Structure of KDM4D with GF028 ligand
To be published
6XWO
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Structure of glutamate transporter homologue GltTk in the unsaturated conditions - inward-inward-outward configuration
分子名称: ASPARTIC ACID, Proton/glutamate symporter, SDF family
著者Arkhipova, V, Slotboom, D.J, Guskov, A.
登録日2020-01-24
公開日2020-03-04
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.39 Å)
主引用文献Structural ensemble of a glutamate transporter homologue in lipid nanodisc environment.
Nat Commun, 11, 2020
8C7O
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Unliganded transcriptional pleiotropic repressor CodY from Staphylococcus aureus
分子名称: ACETATE ION, Global transcriptional regulator CodY, SULFATE ION
著者Hainzl, T, Sauer-Eriksson, A.E.
登録日2023-01-16
公開日2023-06-28
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural insights into CodY activation and DNA recognition.
Nucleic Acids Res., 51, 2023
6M1K
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USP7 in complex with a novel inhibitor
分子名称: Ubiquitin carboxyl-terminal hydrolase 7, methyl 4-[[4-[[3-[4-(aminomethyl)phenyl]-2-methyl-7-oxidanylidene-pyrazolo[4,3-d]pyrimidin-6-yl]methyl]-4-oxidanyl-piperidin-1-yl]methyl]-3-chloranyl-benzoate
著者Liu, S.J, Zhou, X.Y, Li, M.L, Sun, H.B, Wen, X.A.
登録日2020-02-26
公開日2021-03-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.255 Å)
主引用文献N-benzylpiperidinol derivatives as novel USP7 inhibitors: Structure-activity relationships and X-ray crystallographic studies.
Eur.J.Med.Chem., 199, 2020
8C7T
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BU of 8c7t by Molmil
Unliganded transcriptional pleiotropic repressor CodY from Enterococcus faecalis
分子名称: GTP-sensing transcriptional pleiotropic repressor CodY
著者Hainzl, T, Sauer-Eriksson, A.E.
登録日2023-01-17
公開日2023-06-28
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Structural insights into CodY activation and DNA recognition.
Nucleic Acids Res., 51, 2023
6LTD
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BU of 6ltd by Molmil
Crystal Structure of Nonribosomal peptide synthetases (NRPS), FmoA3 (S1046A)-alpha-methyl-L-serine-AMP bound form
分子名称: ADENOSINE MONOPHOSPHATE, Nonribosomal peptide synthetase, alpha-methyl-L-serine
著者Senda, T, Harada, A.
登録日2020-01-22
公開日2021-03-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (4.1 Å)
主引用文献Structural and Functional Analyses of the Tridomain-Nonribosomal Peptide Synthetase FmoA3 for 4-Methyloxazoline Ring Formation.
Angew.Chem.Int.Ed.Engl., 60, 2021
8CIG
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BU of 8cig by Molmil
Crystal structure of an 8-repeat consensus TPR superhelix in tris Buffer with Calcium.
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, ...
著者Liutkus, M, Rojas, A.L, Cortajarena, A.L.
登録日2023-02-09
公開日2024-02-21
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Diverse crystalline protein scaffolds through metal-dependent polymorphism.
Protein Sci., 33, 2024
4XR8
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BU of 4xr8 by Molmil
Crystal structure of the HPV16 E6/E6AP/p53 ternary complex at 2.25 A resolution
分子名称: 1,2-ETHANEDIOL, Cellular tumor antigen p53, DI(HYDROXYETHYL)ETHER, ...
著者Martinez-Zapien, D, Ruiz, F.X, Mitschler, A, Podjarny, A, Trave, G, Zanier, K.
登録日2015-01-20
公開日2016-02-03
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure of the E6/E6AP/p53 complex required for HPV-mediated degradation of p53.
Nature, 529, 2016
6XY7
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Human SHIP1 with magnesium and phosphate bound to the active site
分子名称: DIMETHYL SULFOXIDE, MAGNESIUM ION, PHOSPHATE ION, ...
著者Bradshaw, W.J, Scacioc, A, Fernandez-Cid, A, Mckinley, G, Burgess-Brown, N.A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Gileadi, O.
登録日2020-01-29
公開日2020-02-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.086 Å)
主引用文献Regulation of inositol 5-phosphatase activity by the C2 domain of SHIP1 and SHIP2.
Structure, 2024
7NFC
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Cryo-EM structure of NHEJ super-complex (dimer)
分子名称: DNA (27-MER), DNA (28-MER), DNA ligase 4, ...
著者Chaplin, A.K, Hardwick, S.W, Kefala Stavridi, A, Chirgadze, D.Y, Blundell, T.L.
登録日2021-02-05
公開日2021-08-18
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (4.14 Å)
主引用文献Cryo-EM of NHEJ supercomplexes provides insights into DNA repair.
Mol.Cell, 81, 2021
8EWW
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BU of 8eww by Molmil
Structure of Arabidopsis fatty acid amide hydrolase mutant S305A
分子名称: Fatty acid amide hydrolase
著者Aziz, M, Wang, X, Gaguancela, O.A, Chapman, K.D.
登録日2022-10-24
公開日2024-05-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural interactions explain the versatility of FAAH in the hydrolysis of plant and microbial acyl amide signals
To be published
6EUI
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The GH43, Beta 1,3 Galactosidase, BT3683 with galactose
分子名称: Beta-glucanase, CALCIUM ION, beta-D-galactopyranose
著者Cartmell, A, Gilbert, H.J.
登録日2017-10-30
公開日2018-10-17
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献A surface endogalactanase in Bacteroides thetaiotaomicron confers keystone status for arabinogalactan degradation.
Nat Microbiol, 3, 2018
6M6S
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Crystal structure of Caenorhabditis elegans Dicer-related helicase 3 (DRH-3) C-terminal domain with 5'-ppp 12-mer dsRNA
分子名称: Dicer Related Helicase, RNA (5'-R(*(GTP)P*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*C)-3'), ZINC ION
著者Li, K, Zheng, J, Wirawan, M, Xiong, Z, Fedorova, O, Griffin, P, Plyle, A, Luo, D.
登録日2020-03-16
公開日2021-03-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Insights into the structure and RNA-binding specificity of Caenorhabditis elegans Dicer-related helicase 3 (DRH-3).
Nucleic Acids Res., 49, 2021
6RKZ
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Recombinant Pseudomonas stutzeri nitrous oxide reductase, form II
分子名称: (MU-4-SULFIDO)-TETRA-NUCLEAR COPPER ION, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, ...
著者Zhang, L, Wuest, A, Prasser, B, Mueller, C, Einsle, O.
登録日2019-04-30
公開日2019-06-26
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.601 Å)
主引用文献Functional assembly of nitrous oxide reductase provides insights into copper site maturation.
Proc.Natl.Acad.Sci.USA, 116, 2019
7S00
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X-ray structure of the phage AR9 non-virion RNA polymerase core
分子名称: DNA-directed RNA polymerase, DNA-directed RNA polymerase beta subunit, DNA-directed RNA polymerase beta' subunit, ...
著者Leiman, P.G, Sokolova, M.L, Fraser, A.
登録日2021-08-28
公開日2022-07-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structural basis of template strand deoxyuridine promoter recognition by a viral RNA polymerase.
Nat Commun, 13, 2022
6EUN
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Crystal structure of Neisseria meningitidis vaccine antigen NadA variant 3
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, ...
著者Dello Iacono, L, Liguori, A, Malito, E, Bottomley, M.J.
登録日2017-10-30
公開日2018-10-10
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献NadA3 Structures Reveal Undecad Coiled Coils and LOX1 Binding Regions Competed by Meningococcus B Vaccine-Elicited Human Antibodies.
MBio, 9, 2018

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件を2024-07-31に公開中

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