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PDB: 88608 件

5K2C
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1.9 angstrom A2a adenosine receptor structure with sulfur SAD phasing and phase extension using XFEL data
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 4-{2-[(7-amino-2-furan-2-yl[1,2,4]triazolo[1,5-a][1,3,5]triazin-5-yl)amino]ethyl}phenol, Adenosine receptor A2a/Soluble cytochrome b562 chimera, ...
著者Batyuk, A, Galli, L, Ishchenko, A, Han, G.W, Gati, C, Popov, P, Lee, M.-Y, Stauch, B, White, T.A, Barty, A, Aquila, A, Hunter, M.S, Liang, M, Boutet, S, Pu, M, Liu, Z.-J, Nelson, G, James, D, Li, C, Zhao, Y, Spence, J.C.H, Liu, W, Fromme, P, Katritch, V, Weierstall, U, Stevens, R.C, Cherezov, V, GPCR Network (GPCR)
登録日2016-05-18
公開日2016-09-21
最終更新日2018-11-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Native phasing of x-ray free-electron laser data for a G protein-coupled receptor.
Sci Adv, 2, 2016
1JO4
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Gramicidin C in Sodium Dodecyl Sulfate Micelles (NMR)
分子名称: GRAMICIDIN C
著者Townsley, L.E, Tucker, W.A, Hinton, J.F.
登録日2001-07-26
公開日2001-08-08
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献Structures of Gramicidins A, B, and C Incorporated Into Sodium Dodecyl Sulfate Micelles.
Biochemistry, 40, 2001
6W08
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Crystal Structure of Motility Associated Killing Factor E from Vibrio cholerae
分子名称: 1,2-ETHANEDIOL, ACETIC ACID, CHLORIDE ION, ...
著者Kim, Y, Jedrzejczak, R, Joachimiak, G, Endres, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-02-29
公開日2020-03-11
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献A Genomic Island of Vibrio cholerae Encodes a Three-Component Cytotoxin with Monomer and Protomer Forms Structurally Similar to Alpha-Pore-Forming Toxins.
J.Bacteriol., 204, 2022
3ZGZ
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Ternary complex of E. coli leucyl-tRNA synthetase, tRNA(leu) and toxic moiety from agrocin 84 (TM84) in aminoacylation-like conformation
分子名称: LEUCINE--TRNA LIGASE, MAGNESIUM ION, TRNA-LEU UAA ISOACCEPTOR, ...
著者Chopra, S, Palencia, A, Virus, C, Tripathy, A, Temple, B.R, Velazquez-Campoy, A, Cusack, S, Reader, J.S.
登録日2012-12-19
公開日2013-01-30
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Plant Tumour Biocontrol Agent Employs a tRNA-Dependent Mechanism to Inhibit Leucyl-tRNA Synthetase
Nat.Commun., 4, 2013
4IHF
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Chasing Acyl Carrier Protein Through a Catalytic Cycle of Lipid A Production
分子名称: Acyl carrier protein, CHLORIDE ION, S-[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] (3R)-3-hydroxytetradecanethioate, ...
著者Masoudi, A, Raetz, C.R.H, Pemble, C.W.
登録日2012-12-18
公開日2013-11-13
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Chasing acyl carrier protein through a catalytic cycle of lipid A production.
Nature, 505, 2014
1JV0
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THE CRYSTAL STRUCTURE OF THE ZINC(II) ADDUCT OF THE CAI MICHIGAN 1 VARIANT
分子名称: 1,2-ETHANEDIOL, CARBONIC ANHYDRASE I, CHLORIDE ION, ...
著者Briganti, F, Ferraroni, M, Chegwidden, W.R, Scozzafava, A, Supuran, C.T, Tilli, S.
登録日2001-08-28
公開日2001-09-19
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of a zinc-activated variant of human carbonic anhydrase I, CA I Michigan 1: evidence for a second zinc binding site involving arginine coordination
Biochemistry, 41, 2002
5D5X
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Crystal structure of Chaetomium thermophilum Skn7 with SSRE DNA
分子名称: Putative transcription factor, SSRE DNA strand 1, SSRE DNA strand 2
著者Neudegger, T, Verghese, J, Hayer-Hartl, M, Hartl, F.U, Bracher, A.
登録日2015-08-11
公開日2015-12-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of human heat-shock transcription factor 1 in complex with DNA.
Nat.Struct.Mol.Biol., 23, 2016
3X02
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Crystal structure of PIP4KIIBETA complex with GMP
分子名称: GUANOSINE-5'-MONOPHOSPHATE, Phosphatidylinositol 5-phosphate 4-kinase type-2 beta
著者Takeuchi, K, Lo, Y.H, Sumita, K, Senda, M, Terakawa, J, Dimitoris, A, Locasale, J.W, Sasaki, M, Yoshino, H, Zhang, Y, Kahoud, E.R, Takano, T, Yokota, T, Emerling, B, Asara, J.A, Ishida, T, Shimada, I, Daikoku, T, Cantley, L.C, Senda, T, Sasaki, A.T.
登録日2014-10-09
公開日2015-10-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献The Lipid Kinase PI5P4K beta Is an Intracellular GTP Sensor for Metabolism and Tumorigenesis
Mol.Cell, 61, 2016
5D6Q
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Crystal structure of the ATP binding domain of S. aureus GyrB complexed with a ligand
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1-ethyl-3-{4-[(E)-2-(pyridin-3-yl)ethenyl]-5-(1H-pyrrol-2-yl)-1,3-thiazol-2-yl}urea, DNA gyrase subunit B, ...
著者Zhang, J, Yang, Q, Cross, J.B, Romero, J.A.C, Ryan, M.D, Lippa, B, Dolle, R.E, Andersen, O.A, Barker, J, Cheng, R.K, Kahmann, J, Felicetti, B, Wood, M, Scheich, C.
登録日2015-08-12
公開日2015-11-25
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Discovery of Azaindole Ureas as a Novel Class of Bacterial Gyrase B Inhibitors.
J.Med.Chem., 58, 2015
4IJL
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Fragment-based Discovery of Protein-Protein Interaction Inhibitors of Replication Protein A
分子名称: Replication protein A 70 kDa DNA-binding subunit, {[5-(3-chloro-1-benzothiophen-2-yl)-4-phenyl-4H-1,2,4-triazol-3-yl]sulfanyl}acetic acid
著者Feldkamp, M.D, Patrone, J.D, Kennedy, J.P, Frank, A.O, Vangamudi, B, Pelz, N.F, Rossanese, O.W, Waterson, A.G, Fesik, S.W, Chazin, W.J.
登録日2012-12-21
公開日2013-08-14
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Discovery of Protein-Protein Interaction Inhibitors of Replication Protein A.
ACS MED.CHEM.LETT., 4, 2013
4V8I
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Crystal structure of YfiA bound to the 70S ribosome.
分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S Ribosomal Protein S10, ...
著者Polikanov, Y.S, Blaha, G.M, Steitz, T.A.
登録日2011-12-12
公開日2014-07-09
最終更新日2014-12-10
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献How hibernation factors RMF, HPF, and YfiA turn off protein synthesis.
Science, 336, 2012
3X0A
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Crystal structure of PIP4KIIBETA F205L complex with GMP
分子名称: GUANOSINE-5'-MONOPHOSPHATE, Phosphatidylinositol 5-phosphate 4-kinase type-2 beta
著者Takeuchi, K, Lo, Y.H, Sumita, K, Senda, M, Terakawa, J, Dimitoris, A, Locasale, J.W, Sasaki, M, Yoshino, H, Zhang, Y, Kahoud, E.R, Takano, T, Yokota, T, Emerling, B, Asara, J.A, Ishida, T, Shimada, I, Daikoku, T, Cantley, L.C, Senda, T, Sasaki, A.T.
登録日2014-10-09
公開日2015-10-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The Lipid Kinase PI5P4K beta Is an Intracellular GTP Sensor for Metabolism and Tumorigenesis
Mol.Cell, 61, 2016
8QBD
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Helical reconstruction of yeast eisosome protein Pil1 bound to membrane composed of lipid mixture +PIP2/+sterol (DOPC, DOPE, DOPS, cholesterol, PI(4,5)P2 35:20:20:15:10)
分子名称: D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, O-[(R)-{[(2R)-2,3-bis(octadecanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serine, Sphingolipid long chain base-responsive protein PIL1
著者Kefauver, J.M, Zou, L, Desfosses, A, Loewith, R.J.
登録日2023-08-24
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (3.61 Å)
主引用文献CryoEM architecture of a native stretch-sensitive membrane microdomain
To Be Published
4V1S
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Structure of the GH76 alpha-mannanase BT2949 from Bacteroides thetaiotaomicron
分子名称: ALPHA-1,6-MANNANASE, GLYCEROL
著者Thompson, A.J, Cuskin, F, Spears, R.J, Dabin, J, Turkenburg, J.P, Gilbert, H.J, Davies, G.J.
登録日2014-10-02
公開日2015-02-11
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of the Gh76 Alpha-Mannanase Homolog, Bt2949, from the Gut Symbiont Bacteroides Thetaiotaomicron
Acta Crystallogr.,Sect.D, 71, 2015
8QB8
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Lsp1 in native eisosome lattice bound to plasma membrane microdomain
分子名称: Sphingolipid long chain base-responsive protein LSP1
著者Kefauver, J.M, Zou, L, Loewith, R.J, Defosses, A.
登録日2023-08-24
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献CryoEM architecture of a native stretch-sensitive membrane microdomain
To Be Published
6CL9
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2.20 A MicroED structure of proteinase K at 4.3 e- / A^2
分子名称: Proteinase K
著者Hattne, J, Shi, D, Glynn, C, Zee, C.-T, Gallagher-Jones, M, Martynowycz, M.W, Rodriguez, J.A, Gonen, T.
登録日2018-03-02
公開日2018-05-16
最終更新日2023-10-04
実験手法ELECTRON CRYSTALLOGRAPHY (2.2 Å)
主引用文献Analysis of Global and Site-Specific Radiation Damage in Cryo-EM.
Structure, 26, 2018
8QB7
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Pil1 in native eisosome lattice bound to plasma membrane microdomain
分子名称: Sphingolipid long chain base-responsive protein PIL1
著者Kefauver, J.M, Zou, L, Loewith, R.J, Defosses, A.
登録日2023-08-24
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献CryoEM architecture of a native stretch-sensitive membrane microdomain
To Be Published
6CLA
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2.80 A MicroED structure of proteinase K at 6.0 e- / A^2
分子名称: Proteinase K
著者Hattne, J, Shi, D, Glynn, C, Zee, C.-T, Gallagher-Jones, M, Martynowycz, M.W, Rodriguez, J.A, Gonen, T.
登録日2018-03-02
公開日2018-05-16
最終更新日2023-10-04
実験手法ELECTRON CRYSTALLOGRAPHY (2.8 Å)
主引用文献Analysis of Global and Site-Specific Radiation Damage in Cryo-EM.
Structure, 26, 2018
1JHI
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Solution Structure of a Hedamycin-DNA complex
分子名称: 5'-D(*AP*CP*CP*(HEH)GP*GP*T)-3', HEDAMYCIN
著者Owen, E.A, Burley, G.A, Carver, J.A, Wickham, G, Keniry, M.A.
登録日2001-06-27
公開日2003-07-08
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural investigation of the hedamycin:d(ACCGGT)2 complex by NMR and restrained molecular dynamics.
Biochem.Biophys.Res.Commun., 290, 2002
5UX4
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Crystal Structure of Rat Cathepsin D with (5S)-3-(5,6-dihydro-2H-pyran-3-yl)-1-fluoro- 7-(2-fluoropyridin-3-yl)spiro[chromeno[2,3- c]pyridine-5,4'-[1,3]oxazol]-2'-amine
分子名称: (5S)-3-(5,6-dihydro-2H-pyran-3-yl)-1-fluoro-7-(2-fluoropyridin-3-yl)spiro[chromeno[2,3-c]pyridine-5,4'-[1,3]oxazol]-2'-amine, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Sickmier, A.
登録日2017-02-22
公開日2018-06-13
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.805 Å)
主引用文献Development of 2-aminooxazoline 3-azaxanthene beta-amyloid cleaving enzyme (BACE) inhibitors with improved selectivity against Cathepsin D.
Medchemcomm, 8, 2017
4UTW
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Structural characterisation of NanE, ManNac6P C2 epimerase, from Clostridium perfingens
分子名称: CHLORIDE ION, N-acetyl-D-glucosamine-6-phosphate, PUTATIVE N-ACETYLMANNOSAMINE-6-PHOSPHATE 2-EPIMERASE
著者Pelissier, M.C, Sebban-Kreuzer, C, Guerlesquin, F, Brannigan, J.A, Davies, G.J, Bourne, Y, Vincent, F.
登録日2014-07-23
公開日2014-10-15
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural and Functional Characterization of the Clostridium Perfringens N-Acetylmannosamine-6-Phosphate 2-Epimerase Essential for the Sialic Acid Salvage Pathway
J.Biol.Chem., 289, 2014
6CN0
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2.95 Angstrom Crystal Structure of 16S rRNA Methylase from Proteus mirabilis
分子名称: 16S rRNA (guanine(1405)-N(7))-methyltransferase, CHLORIDE ION, CITRIC ACID, ...
著者Minasov, G, Wawrzak, Z, Di Leo, R, Evdokimova, E, Savchenko, A, Satchell, K.J.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2018-03-06
公開日2018-03-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献2.95 Angstrom Crystal Structure of 16S rRNA Methylase from Proteus mirabilis.
To Be Published
5D7I
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Structure of human MR1-Ac-6-FP in complex with human MAIT M33.64 TCR
分子名称: Beta-2-microglobulin, GLYCEROL, M33.64 TCR Alpha Chain, ...
著者Keller, A.N, Woolley, R.E, Rossjohn, J.
登録日2015-08-14
公開日2016-01-27
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Diversity of T Cells Restricted by the MHC Class I-Related Molecule MR1 Facilitates Differential Antigen Recognition.
Immunity, 44, 2016
4UXD
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2-keto 3-deoxygluconate aldolase from Picrophilus torridus
分子名称: 1,2-ETHANEDIOL, 2-DEHYDRO-3-DEOXY-D-GLUCONATE/2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE ALDOLASE, DI(HYDROXYETHYL)ETHER, ...
著者Priftis, A, Zaitsev, V, Reher, M, Johnsen, U, Danson, M.J, Taylor, G.L, Schoenheit, P, Crennell, S.J.
登録日2014-08-22
公開日2015-09-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Insights into the Substrate Specificity of Archaeal Entner-Doudoroff Aldolases: The Structures of Picrophilus torridus 2-Keto-3-deoxygluconate Aldolase and Sulfolobus solfataricus 2-Keto-3-deoxy-6-phosphogluconate Aldolase in Complex with 2-Keto-3-deoxy-6-phosphogluconate.
Biochemistry, 57, 2018
4UY4
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1.86 A structure of human Spindlin-4 protein in complex with histone H3K4me3 peptide
分子名称: GLYCEROL, HISTONE H3K4ME3, SPINDLIN-4
著者Talon, R, Gileadi, C, Johansson, C, Burgess-Brown, N, Shrestha, L, von Delft, F, Krojer, T, Fairhead, M, Bountra, C, Arrowsmith, C.H, Edwards, A, Oppermann, U.
登録日2014-08-28
公開日2014-09-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.862 Å)
主引用文献1.86 A Structure of Human Spindlin-4 Protein in Complex with Histone H3K4Me3 Peptide
To be Published

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