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PDB: 89111 件

6H75
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SiaP A11N in complex with Neu5Ac (RT)
分子名称: N-acetyl-beta-neuraminic acid, Sialic acid-binding periplasmic protein SiaP
著者Fischer, M, Darby, J.F, Brannigan, J.A, Turkenburg, J, Hubbard, R.E.
登録日2018-07-30
公開日2019-08-14
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Water Networks Can Determine the Affinity of Ligand Binding to Proteins.
J.Am.Chem.Soc., 141, 2019
5KTH
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Structure of cow mincle complexed with brartemicin
分子名称: 2,4-dihydroxy-6-methyl Benzoic acid, CALCIUM ION, TRIETHYLENE GLYCOL, ...
著者Feinberg, H, Rambaruth, N.D.S, Jegouzo, S.A.F, Jacobsen, K.M, Djurhuus, R, Poulsen, T.B, Taylor, M.E, Drickamer, K, Weis, W.I.
登録日2016-07-11
公開日2016-08-31
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Binding Sites for Acylated Trehalose Analogs of Glycolipid Ligands on an Extended Carbohydrate Recognition Domain of the Macrophage Receptor Mincle.
J.Biol.Chem., 291, 2016
6F4U
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Crystal structure of reactive loop cleaved kallistatin at 1.9 angstrom resolution
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
著者Zhou, A, Wei, Z, Lin, F.
登録日2017-11-30
公開日2018-12-12
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of human Kallistatin
To Be Published
6H7D
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Crystal Structure of A. thaliana Sugar Transport Protein 10 in complex with glucose in the outward occluded state
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, PHOSPHATE ION, ...
著者Pedersen, B.P, Paulsen, P.A, Custodio, T.F.
登録日2018-07-31
公開日2019-02-06
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of the plant symporter STP10 illuminates sugar uptake mechanism in monosaccharide transporter superfamily.
Nat Commun, 10, 2019
5T0A
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Crystal Structure of Heparan Sulfate 6-O-Sulfotransferase with bound PAP and heptasaccharide substrate
分子名称: 1,2-ETHANEDIOL, 2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid, ADENOSINE-3'-5'-DIPHOSPHATE, ...
著者Pedersen, L.C, Moon, A.F, Krahn, J.M, Liu, J.
登録日2016-08-15
公開日2017-02-01
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure Based Substrate Specificity Analysis of Heparan Sulfate 6-O-Sulfotransferases.
ACS Chem. Biol., 12, 2017
6B4E
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Crystal structure of Saccharomyces cerevisiae Gle1 CTD-Nup42 GBM complex
分子名称: 1,2-ETHANEDIOL, Nucleoporin GLE1, Nucleoporin NUP42, ...
著者Lin, D.H, Correia, A.R, Cai, S.W, Huber, F.M, Jette, C.A, Hoelz, A.
登録日2017-09-26
公開日2018-06-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural and functional analysis of mRNA export regulation by the nuclear pore complex.
Nat Commun, 9, 2018
6B4O
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BU of 6b4o by Molmil
1.73 Angstrom Resolution Crystal Structure of Glutathione Reductase from Enterococcus faecalis in Complex with FAD
分子名称: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Glutathione reductase, ...
著者Minasov, G, Warwzak, Z, Shuvalova, L, Dubrovska, I, Cardona-Correa, A, Grimshaw, S, Kwon, K, Anderson, W.F, Satchell, K.J.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2017-09-27
公開日2017-10-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献1.73 Angstrom Resolution Crystal Structure of Glutathione Reductase from Enterococcus faecalis in Complex with FAD.
To Be Published
7JKC
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Sheep Connexin-46 at 1.9 angstroms resolution by CryoEM
分子名称: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE, Gap junction alpha-3 protein
著者Flores, J.A, Haddad, B.G, Dolan, K.D, Myers, J.B, Yoshioka, C.C, Copperman, J, Zuckerman, D.M, Reichow, S.L.
登録日2020-07-28
公開日2020-09-09
実験手法ELECTRON MICROSCOPY (1.9 Å)
主引用文献Connexin-46/50 in a dynamic lipid environment resolved by CryoEM at 1.9 angstrom.
Nat Commun, 11, 2020
6F85
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Crystal structure of cytochrome P450 CYP260A1 (S276N) bound with histidine
分子名称: Cytochrome P450 CYP260A1, HISTIDINE, PROTOPORPHYRIN IX CONTAINING FE
著者Jozwik, I.K, Thunnissen, A.M.W.H.
登録日2017-12-12
公開日2018-03-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structure-Based Engineering of Steroidogenic CYP260A1 for Stereo- and Regioselective Hydroxylation of Progesterone.
ACS Chem. Biol., 13, 2018
4YKA
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BU of 4yka by Molmil
The structure of Agrobacterium tumefaciens ClpS2 in complex with L-tyrosinamide
分子名称: ATP-dependent Clp protease adapter protein ClpS 2, L-TYROSINAMIDE, SULFATE ION
著者Stein, B, Grant, R.A, Sauer, R.T, Baker, T.A.
登録日2015-03-04
公開日2016-01-27
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.801 Å)
主引用文献Structural Basis of an N-Degron Adaptor with More Stringent Specificity.
Structure, 24, 2016
6F8Y
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Crystal structure of P. abyssi Sua5 complexed with L-threonine
分子名称: THREONINE, Threonylcarbamoyl-AMP synthase
著者Pichard-Kostuch, A, Zhang, W, Liger, D, Daugeron, M.C, Letoquart, J, Li de la Sierra-Gallay, I, Forterre, P, Collinet, B, van Tilbeurgh, H, Basta, T.
登録日2017-12-13
公開日2018-04-25
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.86 Å)
主引用文献Structure-function analysis of Sua5 protein reveals novel functional motifs required for the biosynthesis of the universal t6A tRNA modification.
RNA, 24, 2018
7JHE
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BU of 7jhe by Molmil
Room Temperature Structure of SARS-CoV-2 Nsp10/Nsp16 Methyltransferase in a Complex with 2'-O-methylated m7GpppA Cap-1 and SAH Determined by Fixed-Target Serial Crystallography
分子名称: 2'-O-methyltransferase, 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE, 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-(2'-O-METHYL)-ADENOSINE, ...
著者Wilamowski, M, Sherrell, D.A, Minasov, G, Kim, Y, Shuvalova, L, Lavens, A, Chard, R, Rosas-Lemus, M, Maltseva, N, Jedrzejczak, R, Michalska, K, Satchell, K.J.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-07-20
公開日2020-08-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献2'-O methylation of RNA cap in SARS-CoV-2 captured by serial crystallography.
Proc.Natl.Acad.Sci.USA, 118, 2021
6B73
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Crystal Structure of a nanobody-stabilized active state of the kappa-opioid receptor
分子名称: CHOLESTEROL, N-[(5alpha,6beta)-17-(cyclopropylmethyl)-3-hydroxy-7,8-didehydro-4,5-epoxymorphinan-6-yl]-3-iodobenzamide, Nanobody, ...
著者Che, T, Majumdar, S, Zaidi, S.A, Kormos, C, McCorvy, J.D, Wang, S, Mosier, P.D, Uprety, R, Vardy, E, Krumm, B.E, Han, G.W, Lee, M.Y, Pardon, E, Steyaert, J, Huang, X.P, Strachan, R.T, Tribo, A.R, Pasternak, G.W, Carroll, I.F, Stevens, R.C, Cherezov, V, Katritch, V, Wacker, D, Roth, B.L.
登録日2017-10-03
公開日2018-01-17
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structure of the Nanobody-Stabilized Active State of the Kappa Opioid Receptor.
Cell, 172, 2018
6B74
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Structures of the two-chain human plasma Factor XIIa co-crystallized with potent inhibitors
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BENZAMIDINE, Coagulation factor XII, ...
著者Dementiev, A.A, Partridge, J.R.
登録日2017-10-03
公開日2018-03-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.323 Å)
主引用文献Structures of human plasma beta-factor XIIa cocrystallized with potent inhibitors.
Blood Adv, 2, 2018
8F1T
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Structure of an 18mer DegP cage bound to the client protein hTRF1
分子名称: Periplasmic serine endoprotease DegP, Telomeric repeat-binding factor 1
著者Harkness, R.W, Ripstein, Z.A, Di Trani, J.M, Kay, L.E.
登録日2022-11-06
公開日2022-11-23
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (12.1 Å)
主引用文献Flexible Client-Dependent Cages in the Assembly Landscape of the Periplasmic Protease-Chaperone DegP.
J.Am.Chem.Soc., 145, 2023
4TLA
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BU of 4tla by Molmil
Crystal structure of N-terminal C1 domain of KaiC
分子名称: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, Circadian clock protein kinase KaiC, ...
著者Abe, J, Hiyama, T.B, Mukaiyama, A, Son, S, Akiyama, S.
登録日2014-05-29
公開日2015-07-01
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Circadian rhythms. Atomic-scale origins of slowness in the cyanobacterial circadian clock.
Science, 349, 2015
6B7R
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Truncated strand 11-less green fluorescent protein
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, Green fluorescent protein
著者Deng, A, Boxer, S.G.
登録日2017-10-05
公開日2017-12-27
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Structural Insight into the Photochemistry of Split Green Fluorescent Proteins: A Unique Role for a His-Tag.
J. Am. Chem. Soc., 140, 2018
5L7P
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BU of 5l7p by Molmil
In silico-powered specific incorporation of photocaged Dopa at multiple protein sites
分子名称: (2~{S})-2-azanyl-3-[3-[(2-nitrophenyl)methoxy]-4-oxidanyl-phenyl]propanoic acid, CALCIUM ION, CHLORIDE ION, ...
著者Hauf, M, Richter, F, Schneider, T, Martins, B.M, Baumann, T, Durkin, P, Dobbek, H, Moeglich, A, Budisa, N.
登録日2016-06-03
公開日2017-09-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Photoactivatable Mussel-Based Underwater Adhesive Proteins by an Expanded Genetic Code.
Chembiochem, 18, 2017
5HM9
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Crystal structure of MamO protease domain from Magnetospirillum magneticum (apo form)
分子名称: MamO protease domain, poly(UNK)
著者Hershey, D.M, Ren, X, Hurley, J.H, Komeili, A.
登録日2016-01-15
公開日2016-03-23
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献MamO Is a Repurposed Serine Protease that Promotes Magnetite Biomineralization through Direct Transition Metal Binding in Magnetotactic Bacteria.
Plos Biol., 14, 2016
7RPJ
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BU of 7rpj by Molmil
Cryo-EM structure of murine Dispatched NNN mutant
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL HEMISUCCINATE, Protein dispatched homolog 1
著者Asarnow, D, Wang, Q, Ding, K, Cheng, Y, Beachy, P.A.
登録日2021-08-03
公開日2021-10-27
最終更新日2021-11-24
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Dispatched uses Na + flux to power release of lipid-modified Hedgehog.
Nature, 599, 2021
7RPH
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Cryo-EM structure of murine Dispatched 'R' conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL HEMISUCCINATE, Lauryl Maltose Neopentyl Glycol, ...
著者Asarnow, D, Wang, Q, Ding, K, Cheng, Y, Beachy, P.A.
登録日2021-08-03
公開日2021-10-27
最終更新日2023-12-13
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Dispatched uses Na + flux to power release of lipid-modified Hedgehog.
Nature, 599, 2021
6VBT
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BU of 6vbt by Molmil
The P212121 Crystal structure of SodCI Superoxide Dismutase with 2 molecules in the asymmetric unit at 1.7 A resolution
分子名称: COPPER (II) ION, Superoxide dismutase [Cu-Zn], ZINC ION
著者Satyshur, K.A, Forest, K.T, Newhouse, P.W.
登録日2019-12-19
公開日2020-12-30
最終更新日2022-03-16
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure and Muropeptide Binding of the Virulence Factor Superoxide Dismutase C1 from Salmonella Typhimurium
To Be Published
6B8R
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Crystal structure of Staphylococcal nuclease variant Delta+PHS V23K/L36Q at cryogenic temperature
分子名称: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
著者Robinson, A.C, Schlessman, J.L, Garcia-Moreno E, B, Benning, M.
登録日2017-10-09
公開日2017-10-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Dielectric Properties of a Protein Probed by Reversal of a Buried Ion Pair.
J Phys Chem B, 122, 2018
4YFX
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Escherichia coli RNA polymerase in complex with Myxopyronin B
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Molodtsov, V, Fleming, P.R, Eyermann, C.J, Ferguson, A.D, Foulk, M.A, McKinney, D.C, Masse, C.E, Buurman, E.T, Murakami, K.S.
登録日2015-02-25
公開日2015-03-11
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.844 Å)
主引用文献X-ray Crystal Structures of Escherichia coli RNA Polymerase with Switch Region Binding Inhibitors Enable Rational Design of Squaramides with an Improved Fraction Unbound to Human Plasma Protein.
J.Med.Chem., 58, 2015
2XZA
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BU of 2xza by Molmil
Crystal Structure of recombinant A.17 antibody FAB fragment
分子名称: FAB A.17 HEAVY CHAIN, FAB A.17 LIGHT CHAIN
著者Carletti, E, Nachon, F, Nicolet, Y, Masson, P, Kurkova, I, Smirnov, I, Friboulet, A, Tramontano, A, Gabibov, A.
登録日2010-11-24
公開日2011-09-21
最終更新日2020-03-11
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Reactibodies Generated by Kinetic Selection Couple Chemical Reactivity with Favorable Protein Dynamics.
Proc.Natl.Acad.Sci.USA, 108, 2011

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