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PDB: 89111 件

6DL8
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Crystal Structure of an influenza A hemagglutinin antibody Fab variant CH67:1203d4 chimera
分子名称: CH67:1203d4 FAB light chain, Ch67:1203d4 FAB heavy chain
著者Dong, J, Finn, J.A, Crowe, J.E.
登録日2018-05-31
公開日2019-06-05
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.805 Å)
主引用文献Identification of Structurally Related Antibodies in Antibody Sequence Databases Using Rosetta-Derived Position-Specific Scoring.
Structure, 28, 2020
4XCE
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Crystal structure of human 4E10 Fab crystalized in the presence of Phosphatidylcholine (06:0 PC); C2 space group
分子名称: 4E10 Fab heavy chain, 4E10 Fab light chain
著者Irimia, A, Stanfield, R.L, Wilson, I.A.
登録日2014-12-17
公開日2016-02-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.93 Å)
主引用文献Crystallographic Identification of Lipid as an Integral Component of the Epitope of HIV Broadly Neutralizing Antibody 4E10.
Immunity, 44, 2016
6QUD
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2-deoxy-galactose reaction intermediate of a Truncated beta-galactosidase III from Bifidobacterium bifidum
分子名称: 2-deoxy-alpha-D-galactopyranose, Beta-galactosidase, CALCIUM ION
著者Thirup, S.S, Nielsen, J.A, Andersen, J.L, Alsarraf, H, Blaise, M.
登録日2019-02-27
公開日2020-03-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Truncated beta-galactosidase III from Bifidobacterium bifidum
To Be Published
6DJ5
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HIV-1 protease with mutation L76V in complex with GRL-0519 (tris-tetrahydrofuran as P2 ligand)
分子名称: (3R,3aS,3bR,6aS,7aS)-octahydrodifuro[2,3-b:3',2'-d]furan-3-yl [(1S,2R)-1-benzyl-2-hydroxy-3-{[(4-methoxyphenyl)sulfonyl](2-methylpropyl)amino}propyl]carbamate, CHLORIDE ION, GLYCEROL, ...
著者Wong-Sam, A.E, Wang, Y.F, Weber, I.T.
登録日2018-05-24
公開日2018-10-17
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Drug Resistance Mutation L76V Alters Nonpolar Interactions at the Flap-Core Interface of HIV-1 Protease.
ACS Omega, 3, 2018
2W6V
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Structure of Human deoxy Hemoglobin A in complex with Xenon
分子名称: GLYCEROL, HEMOGLOBIN SUBUNIT ALPHA, HEMOGLOBIN SUBUNIT BETA, ...
著者Miele, A.E, Draghi, F, Sciara, G, Johnson, K.A, Renzi, F, Vallone, B, Brunori, M, Savino, C.
登録日2008-12-19
公開日2009-04-28
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Pattern of Cavities in Globins: The Case of Human Hemoglobin.
Biopolymers, 91, 2009
6ZCS
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SYK Kinase domain in complex with azabenzimidazole inhibitor 3
分子名称: (3~{R},4~{R})-~{N}4-[1-[2-(1-methylindol-4-yl)-3~{H}-imidazo[4,5-b]pyridin-7-yl]pyrazol-4-yl]oxane-3,4-diamine, Tyrosine-protein kinase SYK
著者Read, J.A.
登録日2020-06-12
公開日2021-06-23
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献SYK Kinase domain in complex with azabenzimidazole inhibitor 3
To Be Published
6U6U
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BU of 6u6u by Molmil
IL36R extracellular domain in complex with BI655130 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BI00655130 Fab heavy chain, ...
著者Larson, E.T, Farrow, N.A.
登録日2019-08-30
公開日2020-04-22
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献X-ray crystal structure localizes the mechanism of inhibition of an IL-36R antagonist monoclonal antibody to interaction with Ig1 and Ig2 extra cellular domains.
Protein Sci., 29, 2020
4XEQ
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CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM DESULFOVIBRIO VULGARIS (Deval_0042, TARGET EFI-510114) BOUND TO COPURIFIED (R)-PANTOIC ACID
分子名称: PANTOATE, TRAP dicarboxylate transporter, DctP subunit
著者Vetting, M.W, Al Obaidi, N.F, Toro, R, Morisco, L.L, Benach, J, Wasserman, S.R, Attonito, J.D, Scott Glenn, A, Chamala, S, Chowdhury, S, Lafleur, J, Love, J, Seidel, R.D, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2014-12-24
公開日2015-01-28
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM DESULFOVIBRIO VULGARIS (Deval_0042, TARGET EFI-510114) BOUND TO COPURIFIED (R)-PANTOIC ACID
To be published
6DUB
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BU of 6dub by Molmil
Crystal structure of a methyltransferase
分子名称: Alpha N-terminal protein methyltransferase 1B, GLYCEROL, RCC1, ...
著者Dong, C, Tempel, W, Li, Y, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2018-06-20
公開日2018-07-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献An asparagine/glycine switch governs product specificity of human N-terminal methyltransferase NTMT2.
Commun Biol, 1, 2018
5EZ7
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BU of 5ez7 by Molmil
Crystal structure of the FAD dependent oxidoreductase PA4991 from Pseudomonas aeruginosa
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, MERCURY (II) ION, flavoenzyme PA4991
著者Jacewicz, A, Schnell, R, Lindqvist, Y, Schneider, G.
登録日2015-11-26
公開日2016-02-17
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of the flavoenzyme PA4991 from Pseudomonas aeruginosa.
Acta Crystallogr.,Sect.F, 72, 2016
6ZCX
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SYK Kinase domain in complex with azabenzimidazole inhibitor 18
分子名称: Tyrosine-protein kinase SYK, ~{N},1-dimethyl-5-[[4-[3-methyl-4-[[(3~{R})-piperidin-3-yl]amino]pyrazol-1-yl]pyrimidin-2-yl]amino]indazole-3-carboxamide
著者Read, J.A.
登録日2020-06-12
公開日2021-06-23
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献SYK Kinase domain in complex with azabenzimidazole inhibitor 18
To Be Published
6ZC0
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SYK Kinase domain in complex with azabenzimidazole inhibitor 2b
分子名称: Tyrosine-protein kinase SYK, ~{N},~{N}-dimethyl-1-[1-[2-(1-methylindol-4-yl)-3~{H}-imidazo[4,5-b]pyridin-7-yl]pyrazol-4-yl]methanamine
著者Read, J.A.
登録日2020-06-09
公開日2021-06-23
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献SYK Kinase domain in complex with azabenzimidazole inhibitor 2b
To Be Published
5BJW
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BU of 5bjw by Molmil
X-ray structure of the PglF 4,6-dehydratase from campylobacter jejuni, T595S variant, in complex with UDP
分子名称: 1,2-ETHANEDIOL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SODIUM ION, ...
著者Riegert, A.S, Thoden, J.B, Holden, H.M.
登録日2017-09-12
公開日2017-11-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural and Biochemical Investigation of PglF from Campylobacter jejuni Reveals a New Mechanism for a Member of the Short Chain Dehydrogenase/Reductase Superfamily.
Biochemistry, 56, 2017
6ZCY
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BU of 6zcy by Molmil
SYK Kinase domain in complex with diamine inhibitor 16
分子名称: Tyrosine-protein kinase SYK, ~{N},1-dimethyl-5-[[4-[3-methyl-4-[[(3~{R})-pyrrolidin-3-yl]amino]pyrazol-1-yl]pyrimidin-2-yl]amino]indazole-3-carboxamide
著者Read, J.A.
登録日2020-06-12
公開日2021-06-23
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献SYK Kinase domain in complex with azabenzimidazole inhibitor 16
To Be Published
5BOJ
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BU of 5boj by Molmil
Crystal Structure of Human Transthyretin in Complex with Gemfibrozil
分子名称: 5-(2,5-dimethylphenoxy)-2,2-dimethylpentanoic acid, SODIUM ION, Transthyretin
著者Begum, A, Olofsson, A, Sauer-Eriksson, A.E.
登録日2015-05-27
公開日2015-08-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Enthalpic Forces Correlate with the Selectivity of Transthyretin-Stabilizing Ligands in Human Plasma.
J.Med.Chem., 58, 2015
3KQ8
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BU of 3kq8 by Molmil
5-Te-uridine derivatized DNA-8mer
分子名称: 5'-D(*GP*(UMS)P*GP*(TTI)P*AP*CP*AP*C)-3', MAGNESIUM ION
著者Sheng, J, Hassan, A.E.A, Zhang, W, Huang, Z.
登録日2009-11-17
公開日2010-11-17
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Synthesis and Structure studies of 5-Tellurium modified DNA
To be Published
6DWH
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BU of 6dwh by Molmil
Crystal structure of complex of BBKI and Bovine Trypsin
分子名称: CHLORIDE ION, Cationic trypsin, Kunitz-type inihibitor, ...
著者Li, M, Wlodawer, A.
登録日2018-06-26
公開日2019-01-30
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of the complex of a kallikrein inhibitor from Bauhinia bauhinioides with trypsin and modeling of kallikrein complexes.
Acta Crystallogr D Struct Biol, 75, 2019
6AAF
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BU of 6aaf by Molmil
Crystal structure of fission yeast Atg8 complexed with the helical AIM of Hfl1.
分子名称: Autophagy-related protein 8, Transmembrane protein 184 homolog C30D11.06c
著者Yamasaki, A, Noda, N.N.
登録日2018-07-18
公開日2018-12-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.197 Å)
主引用文献Lipidation-independent vacuolar functions of Atg8 rely on its noncanonical interaction with a vacuole membrane protein
Elife, 7, 2018
7QSX
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BU of 7qsx by Molmil
Non-obligately L8S8-complex forming RubisCO derived from ancestral sequence reconstruction and rational engineering in L8 complex
分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, RubisCO large subunit
著者Zarzycki, J, Schulz, L, Erb, T.J, Hochberg, G.K.A.
登録日2022-01-14
公開日2022-10-12
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Evolution of increased complexity and specificity at the dawn of form I Rubiscos.
Science, 378, 2022
5F2Q
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BU of 5f2q by Molmil
C-type lectin from Bothrops jararacussu
分子名称: C-type lectin BJcuL, CALCIUM ION, SODIUM ION
著者de Padua, R.A.P, Pinheiro, M.P, Sartim, M.A, Sampaio, S.V, Nonato, M.C.
登録日2015-12-02
公開日2016-12-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献C-type lectin from Bothrops jararacussu
To Be Published
2W2O
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PCSK9-deltaC D374Y mutant bound to WT EGF-A of LDLR
分子名称: CALCIUM ION, LOW-DENSITY LIPOPROTEIN RECEPTOR, PROPROTEIN CONVERTASE SUBTILISIN/KEXIN TYPE 9
著者Bottomley, M.J, Cirillo, A, Orsatti, L, Ruggeri, L, Fisher, T.S, Santoro, J.C, Cummings, R.T, Cubbon, R.M, Lo Surdo, P, Calzetta, A, Noto, A, Baysarowich, J, Mattu, M, Talamo, F, De Francesco, R, Sparrow, C.P, Sitlani, A, Carfi, A.
登録日2008-11-03
公開日2008-11-18
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Structural and Biochemical Characterization of the Wild Type Pcsk9/Egf-Ab Complex and Natural Fh Mutants.
J.Biol.Chem., 284, 2009
6HDI
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BU of 6hdi by Molmil
R49A variant of beta-phosphoglucomutase from Lactococcus lactis in an open conformer to 2.0 A.
分子名称: 1,2-ETHANEDIOL, Beta-phosphoglucomutase, MAGNESIUM ION
著者Robertson, A.J, Bisson, C, Waltho, J.P.
登録日2018-08-17
公開日2020-08-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Transition state of phospho-enzyme hydrolysis in beta-phosphoglucomutase.
To Be Published
5J0I
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BU of 5j0i by Molmil
De novo design of protein homo-oligomers with modular hydrogen bond network-mediated specificity
分子名称: Designed protein 2L6HC3_12
著者Sankaran, B, Zwart, P.H, Pereira, J.H, Baker, D, Boyken, S, Chen, Z, Groves, B, Langan, R.A, Oberdorfer, G, Ford, A, Gilmore, J, Xu, C, DiMaio, F, Seelig, G.
登録日2016-03-28
公開日2016-05-25
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.202 Å)
主引用文献De novo design of protein homo-oligomers with modular hydrogen-bond network-mediated specificity.
Science, 352, 2016
2WC0
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crystal structure of human insulin degrading enzyme in complex with iodinated insulin
分子名称: 1,4-DIETHYLENE DIOXIDE, INSULIN A CHAIN, INSULIN B CHAIN, ...
著者Manolopoulou, M, Guo, Q, Malito, E, Schilling, A.B, Tang, W.J.
登録日2009-03-06
公開日2009-03-24
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Molecular Basis of Catalytic Chamber-Assisted Unfolding and Cleavage of Human Insulin by Human Insulin Degrading Enzyme.
J.Biol.Chem., 284, 2009
6DRX
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BU of 6drx by Molmil
Structural Determinants of Activation and Biased Agonism at the 5-HT2B Receptor
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 5HT2B receptor, BRIL chimera, ...
著者McCorvy, J.D, Wacker, D, Wang, S, Agegnehu, B, Liu, J, Lansu, K, Tribo, A.R, Olsen, R.H.J, Che, T, Jin, J, Roth, B.L.
登録日2018-06-13
公開日2018-08-29
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural determinants of 5-HT2Breceptor activation and biased agonism.
Nat. Struct. Mol. Biol., 25, 2018

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件を2024-09-11に公開中

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