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PDB: 88608 件

8I06
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Crystal structure of serine acetyltransferase from Salmonella typhimurium complexed with CoA
分子名称: COENZYME A, CYSTEINE, Serine acetyltransferase
著者Toyomoto, T, Ono, K, Shiba, T, Momitani, K, Zhang, T, Tsutsuki, H, Ishikawa, T, Hoso, K, Hamada, K, Rahman, A, Zhong, H, Akaike, T, Yamamoto, K, Matsuoka, M, Hanaoka, K, Niidome, T, Sawa, T.
登録日2023-01-10
公開日2023-11-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Alkyl gallates inhibit serine O -acetyltransferase in bacteria and enhance susceptibility of drug-resistant Gram-negative bacteria to antibiotics.
Front Microbiol, 14, 2023
5CPJ
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Nucleosome containing methylated Sat2R DNA
分子名称: DNA (146-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者Osakabe, A, Arimura, Y, Adachi, F, Maehara, K, Ohkawa, Y, Kurumizaka, H.
登録日2015-07-21
公開日2015-10-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Influence of DNA methylation on positioning and DNA flexibility of nucleosomes with pericentric satellite DNA.
Open Biology, 5, 2015
6PAJ
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Structure of the SrrAB Histidine Kinase DHp-CA domain
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Sensor protein SrrB
著者Lopez Redondo, M.L, Marina Moreno, A.
登録日2019-06-11
公開日2020-04-22
最終更新日2020-06-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The SrrAB two-component system regulatesStaphylococcus aureuspathogenicity through redox sensitive cysteines.
Proc.Natl.Acad.Sci.USA, 117, 2020
1T6L
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Crystal Structure of the Human Cytomegalovirus DNA Polymerase Subunit, UL44
分子名称: DNA polymerase processivity factor
著者Appleton, B.A, Loregian, A, Filman, D.J, Coen, D.M, Hogle, J.M.
登録日2004-05-06
公開日2004-08-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献The Cytomegalovirus DNA Polymerase Subunit UL44 Forms a C Clamp-Shaped Dimer.
Mol.Cell, 15, 2004
5JY7
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Complex of Mycobacterium smegmatis trehalose synthase with maltokinase
分子名称: CALCIUM ION, Maltokinase, Trehalose synthase/amylase TreS
著者Futterer, K, Kermani, A.A, Besra, G.S.
登録日2016-05-13
公開日2017-05-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Crystal structure of the TreS-Pep2 complex, initiating alpha-glucan synthesis in the GlgE pathway of mycobacteria.
J.Biol.Chem., 2019
6VSB
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Prefusion 2019-nCoV spike glycoprotein with a single receptor-binding domain up
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Wrapp, D, Wang, N, Corbett, K.S, Goldsmith, J.A, Hsieh, C, Abiona, O, Graham, B.S, McLellan, J.S.
登録日2020-02-10
公開日2020-02-26
最終更新日2021-01-27
実験手法ELECTRON MICROSCOPY (3.46 Å)
主引用文献Cryo-EM structure of the 2019-nCoV spike in the prefusion conformation.
Science, 367, 2020
6VU7
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Crystal structure of YbjN, a putative transcription regulator from E. coli
分子名称: CHLORIDE ION, YbjN protein
著者Stogios, P.J, Evdokimova, E, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-02-14
公開日2020-03-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Crystal structure of YbjN, a putative transcription regulator from E. coli
To Be Published
5CV6
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Crystal structure of Staphylococcal nuclease variant Delta+PHS V66H/I92E at cryogenic temperature
分子名称: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
著者Theodoru, A, Robinson, A.C, Schlessman, J.L, Garcia-Moreno E, B.
登録日2015-07-25
公開日2015-08-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of Staphylococcal nuclease variant Delta+PHS V66H/I92E at cryogenic temperature
To be Published
2VUD
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PA-IIL lectin from pseudomonas aeruginosa complexed with fucose- derived glycomimetics
分子名称: CALCIUM ION, FUCOSE-BINDING LECTIN PA-IIL, SULFATE ION, ...
著者Beha, S, Marotte, K, Sabin, C, Mitchell, E.P, Imberty, A, Roy, R.
登録日2008-05-22
公開日2009-07-21
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Fucose-Derived Glycomimetics as High Affinity Ligands for Bacterial Lectin Pa-Iil from Pseudomonas Aeruginosa
To be Published
2VS7
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The crystal structure of I-DmoI in complex with DNA and Ca
分子名称: 5'-D(*CP*GP*CP*GP*CP*CP*GP*GP*AP*AP *CP*TP*TP*AP*CP*CP*CP*GP*GP*CP*AP*AP*GP*GP*C)-3', 5'-D(*GP*CP*CP*TP*TP*GP*CP*CP*GP*GP *GP*TP*AP*AP*GP*TP*TP*CP*CP*GP*GP*CP*GP*CP*G)-3', ACETATE ION, ...
著者Marcaida, M.J, Prieto, J, Redondo, P, Nadra, A.D, Alibes, A, Serrano, L, Grizot, S, Duchateau, P, Paques, F, Blanco, F.J, Montoya, G.
登録日2008-04-21
公開日2008-11-11
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal Structure of I-Dmoi in Complex with its Target DNA Provides New Insights Into Meganuclease Engineering.
Proc.Natl.Acad.Sci.USA, 105, 2008
8A7P
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beta-2-microglobulin DeltaN6 amyloid fibril form 2PFb
分子名称: Beta-2-microglobulin form pI 5.3
著者Wilkinson, M, Gallardo, R, Radford, S.E, Ranson, N.A.
登録日2022-06-21
公開日2023-03-22
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Disease-relevant beta 2 -microglobulin variants share a common amyloid fold.
Nat Commun, 14, 2023
3EHT
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BU of 3eht by Molmil
Crystal structure of the extracellular domain of human corticotropin releasing factor receptor type 1 (CRFR1) in complex with CRF
分子名称: Corticoliberin, FUSION PROTEIN OF CRFR1 EXTRACELLULAR DOMAIN AND MBP, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Pioszak, A.A, Xu, H.E.
登録日2008-09-14
公開日2008-09-30
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Molecular Recognition of Corticotropin-releasing Factor by Its G-protein-coupled Receptor CRFR1.
J.Biol.Chem., 283, 2008
5K26
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Structure of the SH3 domain of MLK3 bound to peptide generated from phage display
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Mitogen-activated protein kinase kinase kinase 11,Chimera protein of MLK3-SH3 and MIP
著者Kall, S.K, Lavie, A.
登録日2016-05-18
公開日2017-12-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Identification of two distinct peptide-binding pockets in the SH3 domain of human mixed-lineage kinase 3.
J. Biol. Chem., 293, 2018
3EIL
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BU of 3eil by Molmil
Structure of B-DNA d(CGTTAATTAACG)2 in the presence of Manganese
分子名称: 5'-D(*DCP*DGP*DTP*DTP*DAP*DAP*DTP*DTP*DAP*DAP*DCP*DG)-3', MANGANESE (II) ION
著者Millonig, H, Pous, J, Campos, L.J, Subirana, J.A.
登録日2008-09-16
公開日2009-06-02
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The interaction of manganese ions with DNA
J.Inorg.Biochem., 103, 2009
3ZMH
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BU of 3zmh by Molmil
Structure of E.coli rhomboid protease GlpG in complex with monobactam L62
分子名称: CHLORIDE ION, CYCLOPENTYL 2-OXO-4-PHENYLAZETIDINE-1-CARBOXYLATE, RHOMBOID PROTEASE GLPG, ...
著者Vinothkumar, K.R, Pierrat, O.A, Large, J.M, Freeman, M.
登録日2013-02-11
公開日2013-05-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of rhomboid protease in complex with beta-lactam inhibitors defines the S2' cavity.
Structure, 21, 2013
8A7Q
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beta-2-microglobulin V27M amyloid fibril form 4PF
分子名称: Beta-2-microglobulin
著者Wilkinson, M, Gallardo, R, Radford, S.E, Ranson, N.A.
登録日2022-06-21
公開日2023-03-22
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Disease-relevant beta 2 -microglobulin variants share a common amyloid fold.
Nat Commun, 14, 2023
2HMQ
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BU of 2hmq by Molmil
THE STRUCTURES OF MET AND AZIDOMET HEMERYTHRIN AT 1.66 ANGSTROMS RESOLUTION
分子名称: ACETATE ION, HEMERYTHRIN, MU-OXO-DIIRON
著者Holmes, M.A, Stenkamp, R.E.
登録日1990-10-18
公開日1992-01-15
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Structures of met and azidomet hemerythrin at 1.66 A resolution.
J.Mol.Biol., 220, 1991
6PDP
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Human PIM1 bound to benzothiophene inhibitor 379
分子名称: 5-[2-(acetylamino)-1-benzothiophen-4-yl]-N-cyclopropylthiophene-2-carboxamide, Peptide, SULFATE ION, ...
著者Godoi, P.H.C, Sriranganadane, D, Santiago, A.S, Fala, A.M, Ramos, P.Z, Mascarello, A, Segretti, N, Azevedo, H, Guimaraes, C.R.W, Arruda, P, Elkins, J.M, Counago, R.M, Structural Genomics Consortium (SGC)
登録日2019-06-19
公開日2019-07-24
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Human PIM1
To Be Published
3ZE0
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BU of 3ze0 by Molmil
Integrin alphaIIB beta3 headpiece and RGD peptide complex
分子名称: 10E5 FAB HEAVY CHAIN, 10E5 FAB LIGHT CHAIN, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Zhu, J.H, Zhu, J.Q, Springer, T.A.
登録日2012-12-03
公開日2013-06-05
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Complete Integrin Headpiece Opening in Eight Steps.
J.Cell Biol., 201, 2013
5CXW
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Structure of the PonA1 protein from Mycobacterium Tuberculosis in complex with penicillin V
分子名称: (2R,4S)-5,5-dimethyl-2-{(1R)-2-oxo-1-[(phenoxyacetyl)amino]ethyl}-1,3-thiazolidine-4-carboxylic acid, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, ...
著者Filippova, E.V, Kiryukhina, O, Kieser, K, Endres, M, Rubin, E, Sacchettini, J, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG), Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI)
登録日2015-07-29
公開日2016-05-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structures of the transpeptidase domain of the Mycobacterium tuberculosis penicillin-binding protein PonA1 reveal potential mechanisms of antibiotic resistance.
Febs J., 283, 2016
8A5V
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Crystal structure of the human phosposerine aminotransferase (PSAT)
分子名称: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, Phosphoserine aminotransferase, SULFATE ION
著者Costanzi, E, Demitri, N, Ullah, R, Marchesan, F, Peracchi, A, Zangelmi, E, Storici, P, Campanini, B.
登録日2022-06-16
公開日2023-03-29
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献L-serine biosynthesis in the human central nervous system: Structure and function of phosphoserine aminotransferase.
Protein Sci., 32, 2023
7ST6
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Pre translocation, non-rotated 70S ribosome (Structure I)
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Carbone, C.E, Korostelev, A.A.
登録日2021-11-12
公開日2022-02-23
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Time-resolved cryo-EM visualizes ribosomal translocation with EF-G and GTP.
Nat Commun, 12, 2021
2HMZ
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THE STRUCTURES OF MET AND AZIDOMET HEMERYTHRIN AT 1.66 ANGSTROMS RESOLUTION
分子名称: ACETATE ION, HEMERYTHRIN, MONOAZIDO-MU-OXO-DIIRON
著者Holmes, M.A, Stenkamp, R.E.
登録日1990-10-18
公開日1992-01-15
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Structures of met and azidomet hemerythrin at 1.66 A resolution.
J.Mol.Biol., 220, 1991
4URW
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The crystal structure of H-Ras and SOS in complex with ligands
分子名称: 2-(2,6-DIMETHYLPHENYL)-4-(METHYLSULFANYL)-6-(PIPERAZIN-1-YL)-1,3,5-TRIAZINE, GTPASE HRAS, SON OF SEVENLESS HOMOLOG 1
著者Winter, J.J.G, Anderson, M, Blades, K, Brassington, C, Breeze, A.L, Chresta, C, Embrey, K, Fairley, G, Faulder, P, Finlay, M.R.V, Kettle, J.G, Nowak, T, Overman, R, Patel, S.J, Perkins, P, Spadola, L, Tart, J, Tucker, J, Wrigley, G.
登録日2014-07-02
公開日2015-03-04
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献Small Molecule Binding Sites on the Ras:SOS Complex Can be Exploited for Inhibition of Ras Activation.
J.Med.Chem., 58, 2015
5CUD
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Crystal structure of the bromodomain of bromodomain adjacent to zinc finger domain protein 2B (BAZ2B) in complex with 6-CHLOROPURINE (SGC - Diamond I04-1 fragment screening)
分子名称: 1,2-ETHANEDIOL, 6-chloro-9H-purine, Bromodomain adjacent to zinc finger domain protein 2B
著者Bradley, A, Pearce, N, Krojer, T, Ng, J, Talon, R, Vollmar, M, Jose, B, von Delft, F, Bountra, C, Arrowsmith, C.H, Edwards, A, Knapp, S, Structural Genomics Consortium (SGC)
登録日2015-07-24
公開日2015-09-09
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of the second bromodomain of bromodomain adjancent to zinc finger domain protein 2B (BAZ2B) in complex with 6-CHLOROPURINE (SGC - Diamond I04-1 fragment screening)
To be published

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件を2024-07-24に公開中

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