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PDB: 89472 件

8OIO
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Crystal structure of the kelch domain of human KLHL12 in complex with PLEKHA4 peptide
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Kelch-like protein 12, ...
著者Dalietou, E.V, Chen, Z, Ramdass, A.E, Manning, C, Richardson, W, Aitmakhanova, K, Platt, M, Pike, A.C.W, Fedorov, O, Brennan, P, Bullock, A.N.
登録日2023-03-23
公開日2024-04-03
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (1.954 Å)
主引用文献Crystal structure of the kelch domain of human KLHL12 in complex with PLEKHA4 peptide
To Be Published
5NVX
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pVHL:EloB:EloC in complex with (2S,4R)-1-((S)-2-(1-fluorocyclopropanecarboxamido)-3,3-dimethylbutanoyl)-4-hydroxy-N-(4-(4-methylthiazol-5-yl)benzyl)pyrrolidine-2-carboxamide (ligand 10)
分子名称: Elongin-B, Elongin-C, N-[(1-fluorocyclopropyl)carbonyl]-3-methyl-L-valyl-(4R)-4-hydroxy-N-[4-(4-methyl-1,3-thiazol-5-yl)benzyl]-L-prolinamide, ...
著者Gadd, M.S, Soares, P, Galdeano, C, Ciulli, A.
登録日2017-05-04
公開日2017-09-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Group-Based Optimization of Potent and Cell-Active Inhibitors of the von Hippel-Lindau (VHL) E3 Ubiquitin Ligase: Structure-Activity Relationships Leading to the Chemical Probe (2S,4R)-1-((S)-2-(1-Cyanocyclopropanecarboxamido)-3,3-dimethylbutanoyl)-4-hydroxy-N-(4-(4-methylthiazol-5-yl)benzyl)pyrrolidine-2-carboxamide (VH298).
J. Med. Chem., 61, 2018
4WXL
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BU of 4wxl by Molmil
Crystal structure of a peptide deformylase from Haemophilus influenzae complex with Actinonin
分子名称: ACTINONIN, NICKEL (II) ION, Peptide deformylase
著者Kishor, C, Addlagatta, A.
登録日2014-11-14
公開日2015-11-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Crystal structure of a peptide deformylase from Haemophilus influenzae complex with Actinonin
To Be Published
6SCF
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BU of 6scf by Molmil
A viral anti-CRISPR subverts type III CRISPR immunity by rapid degradation of cyclic oligoadenylate
分子名称: Uncharacterized protein, cyclic oligoadenylate
著者McMahon, S.A, Athukoralage, J.S, Graham, S, White, M.F, Gloster, T.M.
登録日2019-07-24
公開日2019-10-30
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献An anti-CRISPR viral ring nuclease subverts type III CRISPR immunity.
Nature, 577, 2020
6SCV
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BU of 6scv by Molmil
Endothiapepsin in complex with ligand 69
分子名称: Endothiapepsin, GLYCEROL, [(~{R})-cyclohexyl-[1-(2-phenylethyl)-1,2,3,4-tetrazol-5-yl]methyl]diazane
著者Magari, F, Heine, A, Klebe, G.
登録日2019-07-25
公開日2020-08-26
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Endothiapepsin in complex with ligand 69
To Be Published
5LWL
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BU of 5lwl by Molmil
MaeR D54A mutant response regulator bound to sulfate
分子名称: SULFATE ION, Transcriptional regulatory protein
著者Miguel-Romero, L, Casino, P, Landete, J.M, Monedero, V, Zuniga, M, Marina, A.
登録日2016-09-18
公開日2017-06-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献The malate sensing two-component system MaeKR is a non-canonical class of sensory complex for C4-dicarboxylates.
Sci Rep, 7, 2017
6XCO
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BU of 6xco by Molmil
Immune receptor complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CACODYLATE ION, GLYCEROL, ...
著者Tran, T.M, Faridi, P, Lim, J.J, Ting, T.Y, Onwukwe, G, Bhattacharjee, P, Jones, M.C, Tresoldi, E, Cameron, J.F, La-Gruta, L.N, Purcell, W.A, Mannering, I.S, Rossjohn, J, Reid, H.H.
登録日2020-06-08
公開日2021-07-14
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献T cell receptor recognition of hybrid insulin peptides bound to HLA-DQ8.
Nat Commun, 12, 2021
7RCK
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BU of 7rck by Molmil
Crystal Structure of PMS2 with Substrate
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Mismatch repair endonuclease PMS2
著者D'Arcy, B.M, Prakash, A.
登録日2021-07-07
公開日2022-03-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献PMS2 variant results in loss of ATPase activity without compromising mismatch repair.
Mol Genet Genomic Med, 10, 2022
5M26
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BU of 5m26 by Molmil
Crystal structure of hydroquinone 1,2-dioxygenase from Sphingomonas sp. TTNP3 in complex with methylhydroquinone
分子名称: 2-methylbenzene-1,4-diol, FE (III) ION, Hydroquinone dioxygenase large subunit, ...
著者Ferraroni, M, Da Vela, S, Scozzafava, A, Kolvenbach, B, Corvini, P.F.X.
登録日2016-10-12
公開日2017-09-27
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The crystal structures of native hydroquinone 1,2-dioxygenase from Sphingomonas sp. TTNP3 and of substrate and inhibitor complexes.
Biochim. Biophys. Acta, 1865, 2017
6BNX
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BU of 6bnx by Molmil
Crystal structure of V278E-glyoxalase I mutant from Zea mays in space group P6(3)
分子名称: COBALT (II) ION, Lactoylglutathione lyase
著者Alvarez, C.E, Agostini, R.B, Gonzalez, J.M, Drincovich, M.F, Campos Bermudez, V.A, Klinke, S.
登録日2017-11-17
公開日2018-11-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Deciphering the number and location of active sites in the monomeric glyoxalase I of Zea mays.
Febs J., 286, 2019
3ZKK
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BU of 3zkk by Molmil
Structure of the xylo-oligosaccharide specific solute binding protein from Bifidobacterium animalis subsp. lactis Bl-04 in complex with xylotetraose
分子名称: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, XOS BINDING PROTEIN, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose
著者Ejby, M, Vujicic-Zagar, A, Fredslund, F, Svensson, B, Slotboom, D.J, Abou Hachem, M.
登録日2013-01-23
公開日2013-10-30
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.198 Å)
主引用文献Structural Basis for Arabinoxylo-Oligosaccharide Capture by the Probiotic Bifidobacterium Animalis Subsp. Lactis Bl-04
Mol.Microbiol., 90, 2013
6SXW
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BU of 6sxw by Molmil
Crystal structure of the first RRM domain of human Zinc finger protein 638 (ZNF638)
分子名称: SULFATE ION, Zinc finger protein 638
著者Newman, J.A, Aitkenhead, H, Wang, D, Burgess-Brown, N.A, von Delft, F, Arrowsmith, C.H, Edwards, A, Bountra, C, Gileadi, O.
登録日2019-09-26
公開日2019-10-16
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.751 Å)
主引用文献Crystal structure of the first RRM domain of human Zinc finger protein 638 (ZNF638)
To Be Published
6V7M
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BU of 6v7m by Molmil
Crystal structure of a proteolytically cleaved, amino terminal domain of apolipoprotein E3
分子名称: Apolipoprotein E, PHOSPHATE ION
著者McPherson, A.
登録日2019-12-08
公開日2020-03-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of a proteolytically cleaved, amino terminal domain of apolipoprotein E3.
Biochem.Biophys.Res.Commun., 2020
4EB8
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BU of 4eb8 by Molmil
Crystal structure of purine nucleoside phosphorylase (W16Y, W94Y, W178Y, H257W) mutant from human complexed with DADMe-ImmG and phosphate
分子名称: 1,2-ETHANEDIOL, 2-amino-7-{[(3R,4R)-3-hydroxy-4-(hydroxymethyl)pyrrolidin-1-yl]methyl}-3,5-dihydro-4H-pyrrolo[3,2-d]pyrimidin-4-one, PHOSPHATE ION, ...
著者Ho, M.C, Haapalainen, A.M, Suarez, J.J, Almo, S.C, Schramm, V.L.
登録日2012-03-23
公開日2013-02-06
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Catalytic Site Conformations in Human PNP by (19)F-NMR and Crystallography.
Chem.Biol., 20, 2013
5M33
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BU of 5m33 by Molmil
Structural tuning of CD81LEL (space group P21)
分子名称: 1,2-ETHANEDIOL, CD81 antigen
著者Cunha, E.S, Sfriso, P, Rojas, A.L, Roversi, P, Hospital, A, Orozco, M, Abrescia, N.G.
登録日2016-10-14
公開日2016-12-14
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献Mechanism of Structural Tuning of the Hepatitis C Virus Human Cellular Receptor CD81 Large Extracellular Loop.
Structure, 25, 2017
1W8N
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BU of 1w8n by Molmil
Contribution of the Active Site Aspartic Acid to Catalysis in the Bacterial Neuraminidase from Micromonospora viridifaciens.
分子名称: 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID, BACTERIAL SIALIDASE, SODIUM ION, ...
著者Newstead, S, Watson, J.N, Dookhun, V, Bennet, A.J, Taylor, G.
登録日2004-09-24
公開日2004-09-30
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Contribution of the Active Site Aspartic Acid to Catalysis in the Bacterial Neuraminidase from Micromonospora Viridifaciens
FEBS Lett., 577, 2004
8G8O
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BU of 8g8o by Molmil
The crystal structure of JAK2 in complex with Compound 31
分子名称: 1,2-ETHANEDIOL, DIMETHYL SULFOXIDE, Tyrosine-protein kinase JAK2, ...
著者Miller, S.T, Ellis, D.A.
登録日2023-02-18
公開日2023-06-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Eyes on Topical Ocular Disposition: The Considered Design of a Lead Janus Kinase (JAK) Inhibitor That Utilizes a Unique Azetidin-3-Amino Bridging Scaffold to Attenuate Off-Target Kinase Activity, While Driving Potency and Aqueous Solubility.
J.Med.Chem., 66, 2023
7R70
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BU of 7r70 by Molmil
Crystal Structure of the UbArk2C fusion protein
分子名称: GLYCEROL, Ubiquitin,E3 ubiquitin-protein ligase RNF165, ZINC ION
著者Paluda, A, Middleton, A.J, Mace, P.D, Day, C.L.
登録日2021-06-24
公開日2022-03-09
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.499 Å)
主引用文献Ubiquitin and a charged loop regulate the ubiquitin E3 ligase activity of Ark2C.
Nat Commun, 13, 2022
6LR6
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BU of 6lr6 by Molmil
The crystal structure of human cytoplasmic LRS
分子名称: 4-Chloro-3-aminomethyl-7-[ethoxy]-3H-benzo[C][1,2]oxaborol-1-ol modified adenosine, 5'-O-(L-leucylsulfamoyl)adenosine, Leucine--tRNA ligase, ...
著者Liu, R.J, Long, T, Li, H, Li, J, Zhao, J.H, Lin, J.Z, Palencia, A, Wang, M.Z, Cusack, S, Wang, E.D.
登録日2020-01-15
公開日2020-03-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.009 Å)
主引用文献Molecular basis of the multifaceted functions of human leucyl-tRNA synthetase in protein synthesis and beyond.
Nucleic Acids Res., 48, 2020
5MAY
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BU of 5may by Molmil
STRUCTURE OF THE LECB LECTIN FROM PSEUDOMONAS AERUGINOSA STRAIN PA14 IN COMPLEX WITH 2-Thiophenesulfonamide-N-(beta-L-fucopyranosyl methyl)
分子名称: CALCIUM ION, Fucose-binding lectin PA-IIL, N-methyl-2-thiophenesulfonamide, ...
著者Sommer, R, Imberty, A, Titz, A, Varrot, A.
登録日2016-11-07
公開日2017-12-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Glycomimetic, Orally Bioavailable LecB Inhibitors Block Biofilm Formation of Pseudomonas aeruginosa.
J. Am. Chem. Soc., 140, 2018
5MBQ
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BU of 5mbq by Molmil
CeuE (H227A variant) a periplasmic protein from Campylobacter jejuni
分子名称: Enterochelin uptake periplasmic binding protein
著者Wilde, E.J, Blagova, E.V, Hughes, A, Raines, D.J, Moroz, O.V, Turkenburg, J.P, Duhme-Klair, A.-K, Wilson, K.S.
登録日2016-11-08
公開日2017-04-12
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Interactions of the periplasmic binding protein CeuE with Fe(III) n-LICAM(4-) siderophore analogues of varied linker length.
Sci Rep, 7, 2017
6PFZ
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BU of 6pfz by Molmil
Structure of a NAD-Dependent Persulfide Reductase from A. fulgidus
分子名称: CALCIUM ION, COENZYME A, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Sazinsky, M.H, Shabdar, S, Garcia-Constineiras, A, Crane III, E.J.
登録日2019-06-23
公開日2020-07-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.10003877 Å)
主引用文献Structural and Kinetic Characterization of Hyperthermophilic NADH-Dependent Persulfide Reductase from Archaeoglobus fulgidus .
Archaea, 2021, 2021
6XQZ
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BU of 6xqz by Molmil
Crystal structure of the catalytic domain of PBP2 S310A from Neisseria gonorrhoeae at pH 7.5
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Peptidoglycan D,D-transpeptidase PenA, ...
著者Fenton, B.A, Zhou, P, Davies, C.
登録日2020-07-10
公開日2021-07-21
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Mutations in PBP2 from ceftriaxone-resistant Neisseria gonorrhoeae alter the dynamics of the beta 3-beta 4 loop to favor a low-affinity drug-binding state.
J.Biol.Chem., 297, 2021
3AQ3
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BU of 3aq3 by Molmil
Molecular insights into plant cell proliferation disturbance by Agrobacterium protein 6b
分子名称: 6b protein
著者Wang, M.M, Yuan, Y.A.
登録日2010-10-25
公開日2011-01-26
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Molecular insights into plant cell proliferation disturbance by Agrobacterium protein 6b
Genes Dev., 25, 2011
6BYL
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BU of 6byl by Molmil
Structure of 14-3-3 gamma bound to O-GlcNAcylated thr peptide
分子名称: 14-3-3 protein gamma, 2-acetamido-2-deoxy-beta-D-glucopyranose, TSASTTVPVTTATTTTTSTW O-GlcNac peptide
著者Schumacher, M.A.
登録日2017-12-20
公開日2018-05-09
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献Structural basis of O-GlcNAc recognition by mammalian 14-3-3 proteins.
Proc.Natl.Acad.Sci.USA, 115, 2018

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