Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6XF6
DownloadVisualize
BU of 6xf6 by Molmil
Cryo-EM structure of a biotinylated SARS-CoV-2 spike probe in the prefusion state (1 RBD up)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Cerutti, G, Gorman, J, Kwong, P.D, Shapiro, L.
Deposit date:2020-06-15
Release date:2020-09-02
Last modified:2020-12-02
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structure-Based Design with Tag-Based Purification and In-Process Biotinylation Enable Streamlined Development of SARS-CoV-2 Spike Molecular Probes.
SSRN, 2020
4GEH
DownloadVisualize
BU of 4geh by Molmil
Crystal structure of MST4 dimerization domain complex with PDCD10
Descriptor: Programmed cell death protein 10, Serine/threonine-protein kinase MST4
Authors:Zhang, M, Shi, Z.B, Zhou, Z.C.
Deposit date:2012-08-02
Release date:2013-04-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural mechanism of CCM3 heterodimerization with GCKIII kinases
Structure, 21, 2013
2HNT
DownloadVisualize
BU of 2hnt by Molmil
CRYSTALLOGRAPHIC STRUCTURE OF HUMAN GAMMA-THROMBIN
Descriptor: GAMMA-THROMBIN
Authors:Tulinsky, A.
Deposit date:1994-08-23
Release date:1994-11-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystallographic structure of human gamma-thrombin.
J.Biol.Chem., 269, 1994
6IFO
DownloadVisualize
BU of 6ifo by Molmil
Crystal structure of AcrIIA2-SpyCas9-sgRNA ternary complex
Descriptor: AcrIIA2, CRISPR-associated endonuclease Cas9/Csn1, RNA (99-MER)
Authors:Liu, L, Wang, Y.
Deposit date:2018-09-20
Release date:2019-01-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.313 Å)
Cite:Phage AcrIIA2 DNA Mimicry: Structural Basis of the CRISPR and Anti-CRISPR Arms Race.
Mol. Cell, 73, 2019
5WTK
DownloadVisualize
BU of 5wtk by Molmil
Crystal structure of RNP complex
Descriptor: CRISPR-associated endoribonuclease C2c2, RNA (58-MER)
Authors:Liu, L, Wang, Y.
Deposit date:2016-12-13
Release date:2017-02-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.651 Å)
Cite:Two Distant Catalytic Sites Are Responsible for C2c2 RNase Activities
Cell, 168, 2017
5WQE
DownloadVisualize
BU of 5wqe by Molmil
Crystal structure of Alicyclobacillus acidoterrestris C2c1 in complex with single-guide RNA at 3.1 Angstrom resolution
Descriptor: CRISPR-associated endonuclease C2c1, RNA (60-MER)
Authors:Liu, L, Wang, Y.L.
Deposit date:2016-11-26
Release date:2017-01-25
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (3.126 Å)
Cite:C2c1-sgRNA Complex Structure Reveals RNA-Guided DNA Cleavage Mechanism
Mol. Cell, 65, 2017
5WTJ
DownloadVisualize
BU of 5wtj by Molmil
Crystal structure of an endonuclease
Descriptor: CRISPR-associated endoribonuclease C2c2
Authors:Liu, L, Wang, Y.
Deposit date:2016-12-13
Release date:2017-02-08
Last modified:2017-08-30
Method:X-RAY DIFFRACTION (3.503 Å)
Cite:Two Distant Catalytic Sites Are Responsible for C2c2 RNase Activities
Cell, 168, 2017
6KOJ
DownloadVisualize
BU of 6koj by Molmil
Crystal structure of SNX11-PXe domain in complex with PI(3,5)P2
Descriptor: Sorting nexin-11, [(2~{R})-2-butanoyloxy-3-[oxidanyl-[(2~{R},3~{R},5~{S},6~{R})-2,4,6-tris(oxidanyl)-3,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] butanoate
Authors:Xu, T, Liu, J.
Deposit date:2019-08-11
Release date:2020-07-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Molecular Basis for PI(3,5)P2Recognition by SNX11, a Protein Involved in Lysosomal Degradation and Endosome Homeostasis Regulation.
J.Mol.Biol., 432, 2020
6KOK
DownloadVisualize
BU of 6kok by Molmil
Crystal Structure of SNX11/SNX10-PXe Chimera
Descriptor: CHLORIDE ION, SODIUM ION, Sorting nexin-11,Uncharacterized protein SNX10
Authors:Xu, T, Liu, J.
Deposit date:2019-08-11
Release date:2020-07-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular Basis for PI(3,5)P2Recognition by SNX11, a Protein Involved in Lysosomal Degradation and Endosome Homeostasis Regulation.
J.Mol.Biol., 432, 2020
6KOI
DownloadVisualize
BU of 6koi by Molmil
Crystal structure of SNX11-PXe domain in dimer form.
Descriptor: Sorting nexin-11
Authors:Xu, T, Xu, J, Liu, J.
Deposit date:2019-08-11
Release date:2020-07-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Molecular Basis for PI(3,5)P2Recognition by SNX11, a Protein Involved in Lysosomal Degradation and Endosome Homeostasis Regulation.
J.Mol.Biol., 432, 2020
8I6N
DownloadVisualize
BU of 8i6n by Molmil
Crystal structure of Co-type nitrile hydratase mutant from Pseudomonas thermophila - L6T
Descriptor: COBALT (II) ION, Cobalt-containing nitrile hydratase subunit alpha, Cobalt-containing nitrile hydratase subunit beta
Authors:Ma, D, Cheng, Z.Y, Lai, Q.P, Hou, X.D, Yin, D.J, Rao, Y.J, Zhou, Z.M.
Deposit date:2023-01-29
Release date:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of Co-type nitrile hydratase mutant L6T from Pseudomonas thermophila at 2.2 Angstroms resolution.
To Be Published
5MDT
DownloadVisualize
BU of 5mdt by Molmil
Structure of the CTD-interacting domain (CID) of Seb1 from S. pombe.
Descriptor: Rpb7-binding protein seb1
Authors:Wittmann, S, Renner, M, Vasiljeva, L, Grimes, J.
Deposit date:2016-11-13
Release date:2017-04-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:The conserved protein Seb1 drives transcription termination by binding RNA polymerase II and nascent RNA.
Nat Commun, 8, 2017
5MDU
DownloadVisualize
BU of 5mdu by Molmil
Structure of the RNA recognition motif (RRM) of Seb1 from S. pombe.
Descriptor: CHLORIDE ION, GLYCEROL, Rpb7-binding protein seb1, ...
Authors:Wittmann, S, Renner, M, El Omari, K, Adams, O, Vasiljeva, L, Grimes, J.
Deposit date:2016-11-13
Release date:2017-04-12
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:The conserved protein Seb1 drives transcription termination by binding RNA polymerase II and nascent RNA.
Nat Commun, 8, 2017
6HHO
DownloadVisualize
BU of 6hho by Molmil
Crystal structure of RIP1 kinase in complex with GSK547
Descriptor: 6-[4-[(5~{S})-5-[3,5-bis(fluoranyl)phenyl]pyrazolidin-1-yl]carbonylpiperidin-1-yl]pyrimidine-4-carbonitrile, Receptor-interacting serine/threonine-protein kinase 1
Authors:Thorpe, J.H, Harris, P.A.
Deposit date:2018-08-28
Release date:2018-12-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.49 Å)
Cite:RIP1 Kinase Drives Macrophage-Mediated Adaptive Immune Tolerance in Pancreatic Cancer.
Cancer Cell, 34, 2018
4C13
DownloadVisualize
BU of 4c13 by Molmil
x-ray crystal structure of Staphylococcus aureus MurE with UDP-MurNAc- Ala-Glu-Lys
Descriptor: CHLORIDE ION, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Ruane, K.M, Roper, D.I, Fulop, V, Barreteau, H, Boniface, A, Dementin, S, Blanot, D, Mengin-Lecreulx, D, Gobec, S, Dessen, A, Dowson, C.G, Lloyd, A.J.
Deposit date:2013-08-09
Release date:2013-10-02
Last modified:2021-03-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Discovery of a first-in-class CDK2 selective degrader for AML differentiation therapy.
Nat.Chem.Biol., 2021
<12

 

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon