Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2KZ1
DownloadVisualize
BU of 2kz1 by Molmil
Inter-molecular interactions in a 44 kDa interferon-receptor complex detected by asymmetric back-protonation and 2D NOESY
分子名称: Interferon alpha-2, Soluble IFN alpha/beta receptor
著者Nudelman, I, Akabayov, S.R, Schnur, E, Biron, Z, Levy, R, Xu, Y, Yang, D, Anglister, J.
登録日2010-06-10
公開日2010-06-23
最終更新日2021-08-18
実験手法SOLUTION NMR
主引用文献Intermolecular interactions in a 44 kDa interferon-receptor complex detected by asymmetric reverse-protonation and two-dimensional NOESY
Biochemistry, 49, 2010
3RQW
DownloadVisualize
BU of 3rqw by Molmil
Crystal structure of acetylcholine bound to a prokaryotic pentameric ligand-gated ion channel, ELIC
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ACETYLCHOLINE, ELIC Pentameric Ligand Gated Ion Channel from Erwinia Chrysanthemi, ...
著者Pan, J.J, Chen, Q, Yoshida, K, Cohen, A, Kong, X.P, Xu, Y, Tang, P.
登録日2011-04-28
公開日2012-03-07
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.913 Å)
主引用文献Structure of the pentameric ligand-gated ion channel ELIC cocrystallized with its competitive antagonist acetylcholine.
Nat Commun, 3, 2012
2KSR
DownloadVisualize
BU of 2ksr by Molmil
NMR structures of TM domain of the n-Acetylcholine receptor b2 subunit
分子名称: Neuronal acetylcholine receptor subunit beta-2
著者Bondarenko, V, Tillman, T, Xu, Y, Tang, P.
登録日2010-01-12
公開日2010-06-16
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献NMR structure of the transmembrane domain of the n-acetylcholine receptor beta2 subunit.
Biochim.Biophys.Acta, 1798, 2010
6JHJ
DownloadVisualize
BU of 6jhj by Molmil
Structure of Marine bacterial laminarinase mutant-E135A
分子名称: CALCIUM ION, LamCAT
著者Yang, J, Xu, Y, Miyakawa, T, Tanokura, M, Long, L.
登録日2019-02-18
公開日2019-04-03
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Molecular Basis for Substrate Recognition and Catalysis by a Marine Bacterial Laminarinase.
Appl.Environ.Microbiol., 86, 2020
6JH5
DownloadVisualize
BU of 6jh5 by Molmil
Structure of Marine bacterial laminarinase
分子名称: CALCIUM ION, LamCAT
著者Yang, J, Xu, Y, Miyakawa, T, Ru, L, Tanokura, M, Long, L.
登録日2019-02-17
公開日2019-04-03
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Molecular Basis for Substrate Recognition and Catalysis by a Marine Bacterial Laminarinase.
Appl.Environ.Microbiol., 86, 2020
6JIA
DownloadVisualize
BU of 6jia by Molmil
Marine bacterial laminarinase mutant E135A complex with laminaritetraose
分子名称: CALCIUM ION, beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-alpha-D-glucopyranose, laminarinase
著者Yang, J, Xu, Y, Miyakawa, T, Tanokura, M, Long, L.
登録日2019-02-20
公開日2019-05-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Molecular Basis for Substrate Recognition and Catalysis by a Marine Bacterial Laminarinase.
Appl.Environ.Microbiol., 86, 2020
3RQU
DownloadVisualize
BU of 3rqu by Molmil
Crystal structure of a prokaryotic pentameric ligand-gated ion channel, ELIC
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ELIC Pentameric Ligand Gated Ion Channel from Erwinia Chrysanthemi, GLYCEROL
著者Pan, J.J, Chen, Q, Yoshida, K, Cohen, A, Kong, X.P, Xu, Y, Tang, P.
登録日2011-04-28
公開日2012-03-07
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.089 Å)
主引用文献Structure of the pentameric ligand-gated ion channel ELIC cocrystallized with its competitive antagonist acetylcholine.
Nat Commun, 3, 2012
2LLY
DownloadVisualize
BU of 2lly by Molmil
NMR structures of the transmembrane domains of the nAChR a4 subunit
分子名称: Neuronal acetylcholine receptor subunit alpha-4
著者Bondarenko, V, Mowrey, D, Tillman, T, Cui, T, Liu, L.T, Xu, Y, Tang, P.
登録日2011-11-18
公開日2012-03-28
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR structures of the transmembrane domains of the a4b2 nAChR.
Biochim.Biophys.Acta, 1818, 2012
2LM2
DownloadVisualize
BU of 2lm2 by Molmil
NMR structures of the transmembrane domains of the AChR b2 subunit
分子名称: Neuronal acetylcholine receptor subunit beta-2
著者Bondarenko, V, Mowrey, D, Tillman, T, Cui, T, Liu, L.T, Xu, Y, Tang, P.
登録日2011-11-18
公開日2012-03-28
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR structures of the transmembrane domains of the a4b2 nAChR.
Biochim.Biophys.Acta, 1818, 2012
2MAW
DownloadVisualize
BU of 2maw by Molmil
NMR structures of the alpha7 nAChR transmembrane domain.
分子名称: Neuronal acetylcholine receptor subunit alpha-7
著者Bondarenko, V, Mowrey, D, Xu, Y, Tang, P.
登録日2013-07-19
公開日2013-11-13
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Insights into distinct modulation of alpha 7 and alpha 7 beta 2 nicotinic acetylcholine receptors by the volatile anesthetic isoflurane.
J.Biol.Chem., 288, 2013
2MC6
DownloadVisualize
BU of 2mc6 by Molmil
A bacteriophage transcription regulator inhibits bacterial transcription initiation by sigma-factor displacement
分子名称: DNA-directed RNA polymerase subunit beta', RNA polymerase inhibitor p7
著者Liu, B, Shadrin, A, Sheppard, C, Xu, Y, Severinov, K, Matthews, S, Wigneshweraraj, S.
登録日2013-08-15
公開日2014-04-02
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献A bacteriophage transcription regulator inhibits bacterial transcription initiation by sigma-factor displacement.
Nucleic Acids Res., 42, 2014
2MC5
DownloadVisualize
BU of 2mc5 by Molmil
A bacteriophage transcription regulator inhibits bacterial transcription initiation by -factor displacement
分子名称: 45L
著者Liu, B, Shadrin, A, Sheppard, C, Xu, Y, Severinov, K, Matthews, S, Wigneshweraraj, S.
登録日2013-08-14
公開日2014-03-26
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献A bacteriophage transcription regulator inhibits bacterial transcription initiation by sigma-factor displacement.
Nucleic Acids Res., 42, 2014
2N59
DownloadVisualize
BU of 2n59 by Molmil
Solution Structure of R. palustris CsgH
分子名称: Putative uncharacterized protein CsgH
著者Hawthorne, W.J, Taylor, J.D, Escalera-Maurer, A, Lambert, S, Koch, M, Scull, N, Sefer, L, Xu, Y, Matthews, S.J.
登録日2015-07-13
公開日2016-05-11
実験手法SOLUTION NMR
主引用文献Electrostatically-guided inhibition of Curli amyloid nucleation by the CsgC-like family of chaperones.
Sci Rep, 6, 2016
2NBA
DownloadVisualize
BU of 2nba by Molmil
Solution NMR structure of the minor DNA-uptake pilin ComP from Neisseri subflava
分子名称: Prepilin-type cleavage/methylation N-terminal domain protein
著者Berry, J.L, Xu, Y.
登録日2016-02-02
公開日2016-05-18
最終更新日2016-06-29
実験手法SOLUTION NMR
主引用文献A Comparative Structure/Function Analysis of Two Type IV Pilin DNA Receptors Defines a Novel Mode of DNA Binding.
Structure, 24, 2016
4Z90
DownloadVisualize
BU of 4z90 by Molmil
ELIC bound with the anesthetic isoflurane in the resting state
分子名称: (2R)-2-chloro-2-(difluoromethoxy)-1,1,1-trifluoroethane, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Gamma-aminobutyric-acid receptor subunit beta-1
著者Chen, Q, Kinde, M, Arjunan, P, Cohen, A, Xu, Y, Tang, P.
登録日2015-04-09
公開日2015-09-16
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Direct Pore Binding as a Mechanism for Isoflurane Inhibition of the Pentameric Ligand-gated Ion Channel ELIC.
Sci Rep, 5, 2015
4HSU
DownloadVisualize
BU of 4hsu by Molmil
Crystal structure of LSD2-NPAC with H3(1-26)in space group P21
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Histone H3, Lysine-specific histone demethylase 1B, ...
著者Chen, F, Dong, Z, Fang, J, Xu, Y.
登録日2012-10-30
公開日2013-02-13
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.988 Å)
主引用文献Structural insight into substrate recognition by histone demethylase LSD2/KDM1b.
Cell Res., 23, 2013
4Z91
DownloadVisualize
BU of 4z91 by Molmil
ELIC cocrystallized with isofluorane in a desensitized state
分子名称: (2R)-2-chloro-2-(difluoromethoxy)-1,1,1-trifluoroethane, 1.7.6 3-bromanylpropan-1-amine, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
著者Chen, Q, Kinde, M.N, Arjunan, P, Cohen, A, Xu, Y, Tang, P.
登録日2015-04-09
公開日2015-09-16
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.3915 Å)
主引用文献Direct Pore Binding as a Mechanism for Isoflurane Inhibition of the Pentameric Ligand-gated Ion Channel ELIC.
Sci Rep, 5, 2015
4IA0
DownloadVisualize
BU of 4ia0 by Molmil
Crystal structure of the PDE5A1 catalytic domain in complex with novel inhibitors
分子名称: 5-bromo-2-{2-ethoxy-5-[(4-methylpiperazin-1-yl)sulfonyl]phenyl}-6-octylpyrimidin-4(3H)-one, MAGNESIUM ION, ZINC ION, ...
著者Ren, J, Chen, T, Xu, Y.
登録日2012-12-05
公開日2014-01-01
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Exploration of the 5-bromopyrimidin-4(3H)-ones as potent inhibitors of PDE5.
Bioorg.Med.Chem.Lett., 23, 2013
4I9Z
DownloadVisualize
BU of 4i9z by Molmil
Crystal structure of the PDE5A1 catalytic domain in complex with novel inhibitors
分子名称: 5-bromo-2-{5-[(4-methylpiperazin-1-yl)acetyl]-2-propoxyphenyl}-6-(propan-2-yl)pyrimidin-4(3H)-one, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ...
著者Ren, J, Chen, T, Xu, Y.
登録日2012-12-05
公開日2014-01-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Exploration of the 5-bromopyrimidin-4(3H)-ones as potent inhibitors of PDE5.
Bioorg.Med.Chem.Lett., 23, 2013
8HDP
DownloadVisualize
BU of 8hdp by Molmil
Structure of A2BR bound to endogenous agonists adenosine
分子名称: ADENOSINE, Adenosine A2b receptor, CHOLESTEROL, ...
著者Cai, H, Xu, Y, Xu, H.E, Jiang, Y.
登録日2022-11-05
公開日2023-01-18
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structures of adenosine receptor A 2B R bound to endogenous and synthetic agonists.
Cell Discov, 8, 2022
8HDO
DownloadVisualize
BU of 8hdo by Molmil
Structure of A2BR bound to synthetic agonists BAY 60-6583
分子名称: 2-[6-azanyl-3,5-dicyano-4-[4-(cyclopropylmethoxy)phenyl]pyridin-2-yl]sulfanylethanamide, Adenosine A2b receptor, CHOLESTEROL, ...
著者Cai, H, Xu, Y, Xu, H.E, Jiang, Y.
登録日2022-11-05
公開日2023-01-18
実験手法ELECTRON MICROSCOPY (2.87 Å)
主引用文献Structures of adenosine receptor A 2B R bound to endogenous and synthetic agonists.
Cell Discov, 8, 2022
5YTK
DownloadVisualize
BU of 5ytk by Molmil
Crystal structure of SIRT3 bound to a leucylated AceCS2
分子名称: AceCS2-KLeu, LEUCINE, LYSINE, ...
著者Li, J, Gong, W, Xu, Y.
登録日2017-11-18
公開日2017-12-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Sensing and Transmitting Intracellular Amino Acid Signals through Reversible Lysine Aminoacylations
Cell Metab., 27, 2018
8IUM
DownloadVisualize
BU of 8ium by Molmil
Cryo-EM structure of the tafluprost acid-bound human PTGFR-Gq complex
分子名称: (~{Z})-7-[(1~{R},2~{R},3~{R},5~{S})-2-[(~{E})-3,3-bis(fluoranyl)-4-phenoxy-but-1-enyl]-3,5-bis(oxidanyl)cyclopentyl]hept-5-enoic acid, Antibody fragment scFv16, G subunit alpha (q), ...
著者Wu, C, Xu, Y, Xu, H.E.
登録日2023-03-24
公開日2023-07-12
実験手法ELECTRON MICROSCOPY (3.14 Å)
主引用文献Ligand-induced activation and G protein coupling of prostaglandin F 2 alpha receptor.
Nat Commun, 14, 2023
8IUL
DownloadVisualize
BU of 8iul by Molmil
Cryo-EM structure of the latanoprost-bound human PTGFR-Gq complex
分子名称: Antibody fragment scFv16, G subunit alpha (q), Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Wu, C, Xu, Y, Xu, H.E.
登録日2023-03-24
公開日2023-07-12
最終更新日2023-08-30
実験手法ELECTRON MICROSCOPY (2.78 Å)
主引用文献Ligand-induced activation and G protein coupling of prostaglandin F 2 alpha receptor.
Nat Commun, 14, 2023
8IUK
DownloadVisualize
BU of 8iuk by Molmil
Cryo-EM structure of the PGF2-alpha-bound human PTGFR-Gq complex
分子名称: (Z)-7-[(1R,2R,3R,5S)-3,5-bis(oxidanyl)-2-[(E,3S)-3-oxidanyloct-1-enyl]cyclopentyl]hept-5-enoic acid, Antibody fragment scFv16, G subunit alpha (q), ...
著者Wu, C, Xu, Y, Xu, H.E.
登録日2023-03-24
公開日2023-07-12
最終更新日2023-11-08
実験手法ELECTRON MICROSCOPY (2.67 Å)
主引用文献Ligand-induced activation and G protein coupling of prostaglandin F 2 alpha receptor.
Nat Commun, 14, 2023

219869

件を2024-05-15に公開中

PDB statisticsPDBj update infoContact PDBjnumon