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8APM
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BU of 8apm by Molmil
Vaccinia virus DNA helicase D5 residues 323-785 hexamer with bound DNA processed in C1
Descriptor: DNA (5'-D(P*CP*CP*GP*AP*AP*TP*CP*A)-3'), DNA (5'-D(P*TP*GP*AP*TP*TP*CP*GP*G)-3'), Primase D5
Authors:Burmeister, W.P, Hutin, S, Ling, W.L, Grimm, C, Schoehn, G.
Deposit date:2022-08-10
Release date:2022-11-09
Last modified:2023-08-16
Method:ELECTRON MICROSCOPY (6.6 Å)
Cite:The Vaccinia Virus DNA Helicase Structure from Combined Single-Particle Cryo-Electron Microscopy and AlphaFold2 Prediction.
Viruses, 14, 2022
8APL
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BU of 8apl by Molmil
Vaccinia virus DNA helicase D5 residues 323-785 hexamer with bound DNA processed in C6
Descriptor: Primase D5
Authors:Burmeister, W.P, Hutin, S, Ling, W.L, Grimm, C, Schoehn, G.
Deposit date:2022-08-10
Release date:2022-11-09
Last modified:2023-08-09
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:The Vaccinia Virus DNA Helicase Structure from Combined Single-Particle Cryo-Electron Microscopy and AlphaFold2 Prediction.
Viruses, 14, 2022
1OCY
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BU of 1ocy by Molmil
Structure of the receptor-binding domain of the bacteriophage T4 short tail fibre
Descriptor: BACTERIOPHAGE T4 SHORT TAIL FIBRE, CITRIC ACID, SULFATE ION, ...
Authors:Thomassen, E, Gielen, G, Schuetz, M, Miller, S, van Raaij, M.J.
Deposit date:2003-02-11
Release date:2003-07-24
Last modified:2018-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The Structure of the Receptor-Binding Domain of the Bacteriophage T4 Short Tail Fibre Reveals a Knitted Trimeric Metal-Binding Fold
J.Mol.Biol., 331, 2003
3NBX
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BU of 3nbx by Molmil
Crystal structure of E. coli RavA (Regulatory ATPase variant A) in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase ravA, SULFATE ION
Authors:El Bakkouri, M.
Deposit date:2010-06-04
Release date:2011-01-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Structure of RavA MoxR AAA+ protein reveals the design principles of a molecular cage modulating the inducible lysine decarboxylase activity
Proc.Natl.Acad.Sci.USA, 107, 2010
7AGG
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BU of 7agg by Molmil
HAd7 knob in complex with 2 EC2-EC3 modules of DSG-2
Descriptor: Desmoglein-2, Fiber
Authors:Effantin, G, Vassal-Stermann, E, Fender, P.
Deposit date:2020-09-22
Release date:2020-10-14
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Binding Mechanism Elucidation of the Acute Respiratory Disease Causing Agent Adenovirus of Serotype 7 to Desmoglein-2.
Viruses, 12, 2020
7AGF
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BU of 7agf by Molmil
HAd7 knob in complex with 3 EC2-EC3 modules of DSG-2
Descriptor: Desmoglein-2, Fiber
Authors:Effantin, G, Vassal-Stermann, E, Fender, P.
Deposit date:2020-09-22
Release date:2020-10-14
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Binding Mechanism Elucidation of the Acute Respiratory Disease Causing Agent Adenovirus of Serotype 7 to Desmoglein-2.
Viruses, 12, 2020
4Y4Q
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BU of 4y4q by Molmil
Crystal structure of sortase B from Type II pilus of Streptococcus pneumoniae
Descriptor: Sortase, SrtB family
Authors:Shaik, M.M, Dessen, A, Di Guilmi, A.M.
Deposit date:2015-02-10
Release date:2015-07-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.162 Å)
Cite:A Structural Snapshot of Type II Pilus Formation in Streptococcus pneumoniae.
J.Biol.Chem., 290, 2015
4PB6
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BU of 4pb6 by Molmil
Feline calicivirus VP1 T=1 virus-like particle
Descriptor: VP1
Authors:Burmeister, W.P, Buisson, M.
Deposit date:2014-04-11
Release date:2015-04-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (8 Å)
Cite:Structure determination of feline calicivirus virus-like particles in the context of a pseudo-octahedral arrangement.
Plos One, 10, 2015
2GTT
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BU of 2gtt by Molmil
Crystal structure of the rabies virus nucleoprotein-RNA complex
Descriptor: Nucleoprotein, PHOSPHATE ION, RNA (99-MER)
Authors:Albertini, A.A.V, Wernimont, A.K, Muziol, T, Ravelli, R.B.G, Weissenhorn, W, Ruigrok, R.W.H.
Deposit date:2006-04-28
Release date:2006-09-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.49 Å)
Cite:Crystal Structure of the Rabies Virus Nucleoprotein-RNA Complex
Science, 313, 2006
7OAG
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BU of 7oag by Molmil
Cryo-EM structure of the plectasin fibril (single strand)
Descriptor: Fungal defensin plectasin
Authors:Effantin, G.
Deposit date:2021-04-19
Release date:2022-04-27
Last modified:2022-11-16
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:pH- and concentration-dependent supramolecular assembly of a fungal defensin plectasin variant into helical non-amyloid fibrils.
Nat Commun, 13, 2022
7OAE
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BU of 7oae by Molmil
Cryo-EM structure of the plectasin fibril (double strands)
Descriptor: Fungal defensin plectasin
Authors:Effantin, G.
Deposit date:2021-04-19
Release date:2022-04-27
Last modified:2022-11-16
Method:ELECTRON MICROSCOPY (2 Å)
Cite:pH- and concentration-dependent supramolecular assembly of a fungal defensin plectasin variant into helical non-amyloid fibrils.
Nat Commun, 13, 2022
7O76
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BU of 7o76 by Molmil
Reversible supramolecular assembly of the anti-microbial peptide plectasin
Descriptor: DI(HYDROXYETHYL)ETHER, Fungal defensin plectasin
Authors:Pohl, C, Noergaard, N, Harris, P.
Deposit date:2021-04-13
Release date:2022-06-29
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.131 Å)
Cite:pH- and concentration-dependent supramolecular assembly of a fungal defensin plectasin variant into helical non-amyloid fibrils.
Nat Commun, 13, 2022
4S3L
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BU of 4s3l by Molmil
Crystal Structure of major pilin protein PitB from type II pilus of Streptococcus pneumoniae
Descriptor: Major Pilin Protein
Authors:Shaik, M.M, Dessen, A, Di Guilmi, A.M.
Deposit date:2015-02-10
Release date:2015-07-29
Last modified:2015-10-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A Structural Snapshot of Type II Pilus Formation in Streptococcus pneumoniae.
J.Biol.Chem., 290, 2015
7BG4
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BU of 7bg4 by Molmil
Multidrug resistance transporter BmrA mutant E504A bound with ATP, Mg, and Rhodamine 6G solved by Cryo-EM
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Lipid A export ATP-binding/permease protein MsbA, MAGNESIUM ION, ...
Authors:Wiseman, B, Chaptal, V, Zampieri, V, Magnard, S, Hogbom, M, Falson, P.
Deposit date:2021-01-05
Release date:2022-01-12
Last modified:2022-02-02
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Substrate-bound and substrate-free outward-facing structures of a multidrug ABC exporter.
Sci Adv, 8, 2022
6GFJ
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BU of 6gfj by Molmil
Structure of RIP2 CARD domain fused to crystallisable MBP tag
Descriptor: Sugar ABC transporter substrate-binding protein,Receptor-interacting serine/threonine-protein kinase 2, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Pellegrini, E, Cusack, S.
Deposit date:2018-04-30
Release date:2019-03-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:RIP2 filament formation is required for NOD2 dependent NF-kappa B signalling.
Nat Commun, 9, 2018
6Y1Z
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BU of 6y1z by Molmil
Mouse serotonin 5HT3 receptor in complex with palonosetron
Descriptor: (3~{a}~{S})-2-[(3~{S})-1-azabicyclo[2.2.2]octan-3-yl]-3~{a},4,5,6-tetrahydro-3~{H}-benzo[de]isoquinolin-1-one, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zarkadas, E, Perot, J, Nury, H.
Deposit date:2020-02-14
Release date:2020-03-04
Last modified:2022-09-14
Method:ELECTRON MICROSCOPY (2.82 Å)
Cite:The Binding of Palonosetron and Other Antiemetic Drugs to the Serotonin 5-HT3 Receptor.
Structure, 28, 2020
6Z6B
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BU of 6z6b by Molmil
Structure of full-length La Crosse virus L protein (polymerase)
Descriptor: RNA (5'-R(*GP*CP*UP*AP*CP*UP*AP*A)-3'), RNA (5'-R(P*AP*GP*UP*AP*GP*UP*GP*UP*GP*C)-3'), RNA (5'-R(P*UP*UP*AP*GP*UP*AP*GP*UP*AP*CP*AP*CP*UP*AP*CP*U)-3'), ...
Authors:Cusack, S, Gerlach, P, Reguera, J.
Deposit date:2020-05-28
Release date:2020-07-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.961 Å)
Cite:Pre-initiation and elongation structures of full-length La Crosse virus polymerase reveal functionally important conformational changes.
Nat Commun, 11, 2020
6RLP
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BU of 6rlp by Molmil
Cryo-EM reconstruction of TMV coat protein
Descriptor: Capsid protein, RNA (5'-R(P*GP*AP*A)-3')
Authors:Kandiah, E, Effantin, G.
Deposit date:2019-05-02
Release date:2022-11-23
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Cryo-EM reconstruction of TMV coat protein
To Be Published
8C5C
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BU of 8c5c by Molmil
microtubule decorated with tubulin oligomers in presence of APC C-terminal domain. (here only map corresponding to the 13-pf microtubule is represented)
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Serre, L, Arnal, I.
Deposit date:2023-01-06
Release date:2023-01-25
Last modified:2023-02-01
Method:ELECTRON MICROSCOPY (5.3 Å)
Cite:The mitotic role of adenomatous polyposis coli requires its bilateral interaction with tubulin and microtubules.
J.Cell.Sci., 136, 2023
5LYE
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BU of 5lye by Molmil
Re-refined structure of the bacteriophage T4 short tail fibre PDB entry 1H6W containing 71 additionally identified residues
Descriptor: CHLORIDE ION, Gp12, SULFATE ION
Authors:van Raaij, M.J, Taylor, N.M.I, Leiman, P.G.
Deposit date:2016-09-27
Release date:2018-01-17
Last modified:2019-11-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Contractile injection systems of bacteriophages and related systems.
Mol. Microbiol., 108, 2018
5N2U
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BU of 5n2u by Molmil
Influenza D virus nucleoprotein
Descriptor: Nucleoprotein
Authors:Labaronne, A, Ruigrok, R.W.H, Crepin, T.
Deposit date:2017-02-08
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The structure of the nucleoprotein of Influenza D shows that all Orthomyxoviridae nucleoproteins have a similar NPCORE, with or without a NPTAILfor nuclear transport.
Sci Rep, 9, 2019
6QNT
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BU of 6qnt by Molmil
Human Adenovirus type 3 fiber knob in complex with one copy of Desmoglein-2
Descriptor: Desmoglein-2, Fiber protein
Authors:Effantin, G.
Deposit date:2019-02-12
Release date:2019-03-27
Last modified:2020-09-30
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:CryoEM structure of adenovirus type 3 fibre with desmoglein 2 shows an unusual mode of receptor engagement.
Nat Commun, 10, 2019
6QNU
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BU of 6qnu by Molmil
Human Adenovirus type 3 fiber knob in complex with two copies of Desmoglein-2
Descriptor: Desmoglein-2, Fiber protein
Authors:Effantin, G.
Deposit date:2019-02-12
Release date:2019-03-27
Last modified:2020-09-30
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:CryoEM structure of adenovirus type 3 fibre with desmoglein 2 shows an unusual mode of receptor engagement.
Nat Commun, 10, 2019
8FFR
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BU of 8ffr by Molmil
Revised structure of the rabies virus nucleoprotein-RNA complex
Descriptor: Nucleoprotein, PHOSPHATE ION, RNA (99-MER)
Authors:Leyrat, C, Bourhis, J.M, Albertini, A.A.V, Wernimont, A.K, Muziol, T, Ravelli, R.B.G, Weissenhorn, W, Ruigrok, R.W.H, Jamin, M.
Deposit date:2022-12-09
Release date:2023-01-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.49 Å)
Cite:Structure and Dynamics of the Unassembled Nucleoprotein of Rabies Virus in Complex with Its Phosphoprotein Chaperone Module.
Viruses, 14, 2022
6R1T
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BU of 6r1t by Molmil
Structure of LSD2/NPAC-linker/nucleosome core particle complex: Class 1, free nuclesome
Descriptor: DNA (147-MER), HISTONE H2A, Histone H2A, ...
Authors:Marabelli, C, Pilotto, S, Chittori, S, Subramaniam, S, Mattevi, A.
Deposit date:2019-03-15
Release date:2019-04-24
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:A Tail-Based Mechanism Drives Nucleosome Demethylation by the LSD2/NPAC Multimeric Complex.
Cell Rep, 27, 2019

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